mRNA_D-dudresnayi_contig10318.343.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10318.343.1 vs. uniprot
Match: D8LGS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGS7_ECTSI) HSP 1 Score: 359 bits (922), Expect = 1.660e-104 Identity = 274/546 (50.18%), Postives = 330/546 (60.44%), Query Frame = 1 Query: 1 QQAIRKWKSLGKVLCRLLRMSDYWYGFVADDTLSQEERTVRRISVLQQARAIRHQMVEMRMVGTGRLKTLVMAFAERYPEAVWMKFRLLMRQPKSQRCRRDMCVCAMLLSDVDNSFFKHTTAGWPFSRLVKLITDMRLVEKPALAVLYEEGETAEKIVGGE--------------VGRQVSGGKSED---VEAGGELXXXXXXXXXXXIAAGEDEREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--------------------------AASVPTAAFQEHLAKKAARGQPMYCPRMSTECEAWATDHELRPTTTAIDR----LARRRREAVVEEVEAALSGSGAGPRRPRTLNLSPRYKTCRLGPGALFGDRP------ASTGRLTVEGGVAT----AAAALETAVTASNVELLEIGFGSYRSLLEDGVQKRVAAAVDVLKATSVMDGVPLSALERICRYSTDRTAGCMIENPAMPPPFLNPGVTMVTSQPQ-------------ESNGRQ---NLICRRGALRRTAFFIAEGEGEVFV 1419 +QA+RKWK+LGK LCRLLRMSDYWYGF D LS EER RRISVLQQ ++EMR VG +KTLV+A AERYP +VW +FR LMRQP+++R RRDM VCA+LL ++DN FFK+TTAGWPFSRLV L +D RLV+KPAL+VLYEEGETA + + E + + + S+D V +G XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AA +PT A Q+ LA KA+RGQPMY PR E EA E + + R + RR+R A E +EA +SG GA PRR RT N++PR+K CRLG GALFGDRP +T L+ GVAT A ALETAVTA ELLEIG +YR LL GV+++ AV VL+AT MDGVP AL RICRY T+R+ G + NP P LNP + V + E NG +++CR+G R T FF+ EG GEV + Sbjct: 481 EQAVRKWKNLGKALCRLLRMSDYWYGFAFDGALSGEERAARRISVLQQ-------ILEMRGVGRTAMKTLVLAIAERYPRSVWSRFRQLMRQPRAERKRRDMAVCAVLLGEIDNQFFKYTTAGWPFSRLVDLASDSRLVQKPALSVLYEEGETAPRTIDSETTVTQAVLVPSVVSIATKTTDSNSDDDPRVASGSSCNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERWTVGAYVIVRGSVNLYILERGPAAMLPTPASQDDLATKASRGQPMYRPRPPAEWEAADVAVEAQEGQPGVGRGAGLVGRRQRRAFTEHLEAVMSGRGAEPRRARTRNMAPRWKACRLGAGALFGDRPEAGSNPTTTTGLSQPPGVATEPPGAGPALETAVTAEETELLEIGVTTYRRLLAAGVREQEGRAVAVLRATGAMDGVPTQALARICRYGTERSTGPQLANP----PLLNPSLGRVFPGREQGKAESAFGFPRGEDNGNDYNDSVMCRKGTFRGTVFFVMEGHGEVIL 1015
BLAST of mRNA_D-dudresnayi_contig10318.343.1 vs. uniprot
Match: A0A6H5KB88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB88_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.000e-47 Identity = 154/455 (33.85%), Postives = 199/455 (43.74%), Query Frame = 1 Query: 199 LKTLVMAFAERYPEAVWMKFRLLMRQPKSQRCRRDMCVCAMLLS---------------------DVDNSFFKHTTAGWPFSRLVKLITDMRLVEKPALAVLYEEGETAEKIVGGEVGRQVSGGKSEDVEAGGELXXXXXXXXXXXIAAGEDEREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAASVPTAAFQEHLAKKAARG-----QPMYCPRMSTECEAWATDHELRPTTTAIDRLARRRREAVVEEVEAALSGSGAGPRRPRTLNLSPRYKTCRLGPGALFGDRPASTGRLTVEGGVAT----------AAAALETAVTASNVELLEIGFGSYRSLLEDGVQKRVAAAVDVLKATSVMDGVPLSALERICRYSTDRTAGCMIENPAMPPPFLNPGVTMVTSQPQES---------NGRQ---NLICRRGALRRTAFFIAEGEGEVFV 1419 +KTLV+A AERYP +VW +FR LMRQP+ +R RRDM VCA+LL+ ++DN FFK+TTAGWPFSRLV L +D RLV+KPAL+VLYEEGETA + + SE L I + D+ ++ T + E + A G W P ++E E G+ R L + R+K CRLG GALFGDRP + T GV+ A ALETAVTA ELLEIG +YR LL GV++R AV VL+AT +GVP AL RICRY+T+R+AG + + ES NG +++CR+G R T FF+ EG GEV + Sbjct: 1 MKTLVLAIAERYPRSVWSRFRQLMRQPRDERKRRDMAVCAVLLAVRFLTRNTMITRGSYRLCTEEEIDNQFFKYTTAGWPFSRLVDLASDSRLVQKPALSVLYEEGETAPRTI-----------DSETTVTQAVLVPSVVSIATKIIDSNSDD---------------------------DPRVASGSSCDETTSCSEGGKSRVAAGLSSXXXXXXXXXXXXXXXGWGGVQGTGPPRQQPXXXXXEQQE------ERWTVGAYVIVRGSVNLYILERWKACRLGAGALFGDRPEAGSNPTTTTGVSQPPEAATEPPGAGPALETAVTAEETELLEIGVNTYRRLLAAGVREREGRAVAVLRATGATNGVPTQALARICRYATERSAGPQLXXXXXXXXXXGHIFSGHEQGKDESAFGFPRGIDNGNDYNDSIMCRQGTFRGTVFFVMEGHGEVVL 411 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10318.343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10318.343.1 >prot_D-dudresnayi_contig10318.343.1 ID=prot_D-dudresnayi_contig10318.343.1|Name=mRNA_D-dudresnayi_contig10318.343.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=629bp MSDYWYGFVADDTLSQEERTVRRISVLQQARAIRHQMVEMRMVGTGRLKTback to top mRNA from alignment at D-dudresnayi_contig10318:2736..9716- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10318.343.1 ID=mRNA_D-dudresnayi_contig10318.343.1|Name=mRNA_D-dudresnayi_contig10318.343.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=6981bp|location=Sequence derived from alignment at D-dudresnayi_contig10318:2736..9716- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10318:2736..9716- >mRNA_D-dudresnayi_contig10318.343.1 ID=mRNA_D-dudresnayi_contig10318.343.1|Name=mRNA_D-dudresnayi_contig10318.343.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3774bp|location=Sequence derived from alignment at D-dudresnayi_contig10318:2736..9716- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |