mRNA_D-dudresnayi_contig10308.337.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10308.337.1
Unique NamemRNA_D-dudresnayi_contig10308.337.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10308.337.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10308contigD-dudresnayi_contig10308:2823..7623 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.4
Seed ortholog evalue3.4e-15
Seed eggNOG ortholog2880.D7FZN5
KEGG koko:K16675,ko:K20030,ko:K20032
KEGG TC9.B.37.1,9.B.37.3
KEGG Pathwayko04391,map04391
EggNOG free text desc.protein-cysteine S-palmitoyltransferase activity
EggNOG OGsCOG5273@1,KOG1311@2759
EC2.3.1.225
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Exons3
Model size256
Cds size255
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10308.337.1prot_D-dudresnayi_contig10308.337.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10308 2823..7623 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927529.836859-CDS-D-dudresnayi_contig10308:2822..28881622927529.836859-CDS-D-dudresnayi_contig10308:2822..2888Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10308 2823..2888 +
1690556794.625709-CDS-D-dudresnayi_contig10308:2822..28881690556794.625709-CDS-D-dudresnayi_contig10308:2822..2888Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10308 2823..2888 +
1622927529.8516424-CDS-D-dudresnayi_contig10308:4292..43701622927529.8516424-CDS-D-dudresnayi_contig10308:4292..4370Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10308 4293..4370 +
1690556794.63643-CDS-D-dudresnayi_contig10308:4292..43701690556794.63643-CDS-D-dudresnayi_contig10308:4292..4370Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10308 4293..4370 +
1622927529.8620799-CDS-D-dudresnayi_contig10308:7512..76231622927529.8620799-CDS-D-dudresnayi_contig10308:7512..7623Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10308 7513..7623 +
1690556794.6449215-CDS-D-dudresnayi_contig10308:7512..76231690556794.6449215-CDS-D-dudresnayi_contig10308:7512..7623Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10308 7513..7623 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10308.337.1

>prot_D-dudresnayi_contig10308.337.1 ID=prot_D-dudresnayi_contig10308.337.1|Name=mRNA_D-dudresnayi_contig10308.337.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=85bp
EGGDNDQSSNAGDSPSVLATPTRARSGRSVGAPRSAGRKAHHRPRSKKPR
ESYGVVGGGNRPSEEGQEVIEPPGSPRRRWQRWMG
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mRNA from alignment at D-dudresnayi_contig10308:2823..7623+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10308.337.1 ID=mRNA_D-dudresnayi_contig10308.337.1|Name=mRNA_D-dudresnayi_contig10308.337.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4801bp|location=Sequence derived from alignment at D-dudresnayi_contig10308:2823..7623+ (Desmarestia dudresnayi DdudBR16 monoicous)
GAAGGCGGGGATAACGACCAGAGCTCTAATGCTGGGGACTCTCCTTCTGT
CTTGGCGACGCCAACGGTAAGTAGACGTTGCTAAATATTTAAATATTAAG
CGTTTCGCACGGTGTGATGGTTTATATTTTGGTGACGTTACGTTTCTTCG
ACCCGCTTGTCATGGTCCATTCGAGAGCATAACGTAGTAAGAAAAAGCGA
AGTAACACCGACTAGATATGTAGACTAGTTCCGGCCCCTGTAGGTTGCAG
TTGGATGGTACTCGGCGACACTGCAATGTGTCCAACGCATTGACTGGGCC
TTGAGTTTTCCAGTCCCCTGTGTGGATGTGTGCCGACGGTGCGCATGGTG
TATGTCAGGGCACGGACTGTGTGTGAAGCACGTTGCAGCATTGACATAAG
AAGCTAATGATAAAGGGCTCGTATGAGCTAATATAATATGGATGCTCGTG
TATAAGGTACGTGTAGGGTCGGTCGATAGCTCAAGATACAGCATGACTCT
ACTGCTGCAGCTAGAATAATACCAGGTATTATATGACAAAAACATTACTT
TCATAATTCGTGATTAGCTGCTGCTACTATAGTACAAGTATACGAACAAG
CGCGTGCGACGACGGCGACCTTCGGACGGCCGCCTGGCCGACATCAGAGA
AGTAAAAAGAGAAGTGTGGAGGACGAATGAGTGTCGGGATTGGTGCCCTA
TCTTAGTATTTGTAGTGTATACGCACCCGACGAGCTCCAACCTGCAGTGA
ATAAAATCGTCGAGGTAAGTTTTCCTAGTGCTGGAAAGGCATTTTTCAAG
GTGTGTTTATTAATATATGAACGTGGCTGCCGTGGATTGCTTGTTTTCAG
AGGGGCGAGGGTGTCGGCTTAGGCGGTGGGATCGCGATTTTTTGTTTCCA
CTCTCTATAAAAACAAAACAAAACACCCCCCCACCACAGTAGTAATTGCG
ATAAGTAACAGTAAGTAGTAGTAGTAGGCCCCATGCTCTCTCTCTAGAGT
GCAGCTTGGCCGTCTTTTAGCTTTTGTCGGCTTAGGCGGTGGGATCGCGA
TTTTTTGTTTCCACTGTCTATAAAAACAAATCAAAACACCCCCCCCACCA
CAGTAGTAATTGCGATAACAGTAAGTAGTAGTGGTAGGCCCCATGCTCTC
TCTCTAGAGTGCAGCTGGGCCGTCTTTTGGCTTTTTTTCGATGCCAATAT
GACAGAGCTCGTGTCAACCCTGTTGTTGCTGCATTCCCTCTTTGTGGAAG
AAATTACATGCCAATCTTGTGTTTTTTGTGTGTGTGCCGGTATGCTATGT
ACTGCTGAGCTTTAATGTACAGTCTGTGCGCTGTTGTGTGTGAGGTTTTA
ACATCGAAATACCGTGTGTGACGCCTTCCCCCTTCCGACCTATCTGTCTC
TCTGTCGGCGTGTCTGTTGCTGGTTGCCCTGTCCGAAAACGTGTTGCTGT
GCTCTGTTTCTGAATCGCAGCGAGCTAGATCGGGACGATCAGTCGGCGCC
CCGCGTTCTGCCGGACGGAAAGCCCACCACCGTCCTAGGAGCAAGAAGGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTCTTGTGTGTGTG
TGCGCGCGCGTGTGTGAGAGAGATGGCGTTACCTGTTCCCGTCACCAAAA
GAGAGTAACAATGCTGGTGAGCAAGAAGGTGTGTATTTGTATGGGTGTTT
GTGTGTGTGAGAGAGAGATCGAGAGTACAGTACCTGTTTCCGTCGCCAAA
AGAGAGTACCGGTGCTGCTGATGAGCAAGAAGTTGTGTGTGTTTGTGTGT
GTGTGTGTGCGAGAGAGAGAGAGAGAGAGAGAGAGCGAAAAAGAATGCAA
TTGTTTCAGTCACCAAAAAAAGTAGCTACGGTACCTCGTACGTGCTTGCT
GTATCCGTTATTCTAGCGGGAGTAGAATTTCGTGGCGTTGAGTTTTTGAT
GGTACGCGACCGCATCTATCTACCGATTCACTTACTCTACACAAGAAGGA
ACGCAGCATTTTTGCGGCACAGTATGTAGACCGGCGTTGACGCGTGCGTG
TGCATTTTCGTGTGCGTGTTTATTTTTAATTTTTAATTTGGTAAGGCCAG
GGTGTGCGCGCGGGGGGGGGGTGGCGGGGGGGCAGCTTGTCGTTTCTCAG
CCCTGATTGTATGGGTTAGGTGCGTTGTGTTGCGACATCACCAGGTGGTT
GCATACCTTCAGGCGGGTTTAAAGTCGACTGCGCGGCACATACATTCCTA
GAGCGTCTTGGACTCCTCCTCTTCTTGTGTGCTATTATTCATTGGTAAGT
GCGTGATCTCGACAGGAAAAAAATTCGAGGGAGCATACCGAAAAAAAAAT
GCTGTCTCGATTCCACGCGGGAGGGCGACGAAAATGACTACGGTTGTCGG
CACGGTATGATAAGCGCGTGAGGCACCAGACACCAAAACATGTTGGTTGA
CGGTCAATCATCAAGCCGTCAAGGCCTTTCTCGCCGTTAATATACTATCA
CGAGGGCCCCTAATAAATAGGCCCAAAACACTTACGTTGACGTGTGTATC
GCGAGACAGACGCGGCGTGAGTCGCGGATCTCGTTCGTTTTTATCATGCG
GTGGCAGTAGCCTTATCAACGATGCTACATTTTCATTCTTCGGGGGGGGG
GGGGGGGGGGGGGAATAAGGATCCTTACTTGCGCTCGCCCTTTTTTACTT
TGTCCTTATCTGGATCTGTGCATTTTGTTTGTTGGGTGGGGGGGGGGGGG
GGGGGGGATCGGGAATAAGGATCCTTACTTGCGCTCGCCCTTTTTTACTT
TGTTTTGAGCCGATTTGTTATGGGCCTCTGTAATAGTTCTAGTGTAGGGC
TTCTTTGACTGGCCGTTCGTCAAGGTGTAAAACTGACGTCAACCGACATG
TCTTTGCCAGACACCGCTTCTACAAAGGCGGCCGATCGCCTTCACAAGTG
TTTTCAAGACACAAAAGAAGATGCAAGCACATTGGTATTAATAGTATCAT
AGCATCTTAGGGCTACTATAATATCATGGTTCGTTTGTGACTAATATAGC
GATTAGGCATTACAGAAGCGTGTGTGGACTCTCGGGGGGACCGGATCCGA
TGGTAAAAAAAAACTCGCCCTTCCCCCTCCTCTCGAATTGAGAAACTTTT
TTTTTTTGTCTCTCTCTCGAGGCTCTCTAACCTGTTTTTATTGTTATTGT
CGTCAAAGTTTGTTGTTTTGTTTTTGTTTTTTTAATGCTCCAGCGGGATG
AGTAAAACAAAGCGTACCCCCCACAAAAAATTTCCACGATTCAGCTTTTT
TTAAGGTTATGTTGTTTTTACGCTCTTCTCCTTCATTCCATTTTTCTCGA
GCCTTGTGACCTTTTTGGGTTTTTTTTAGCATTTTTACCGCTTTATATTT
TGCCGATTCCCTCCTTTTAGTTGTACAACACAACGTCCAGCAGGAGTGTC
GGAAGCCAATAGTAATTGGCCTTGGGGATAGCCACCCAGGGAGGCAACGT
TAATGACGTCACTTTCCCGGGGCAGTGTGGGTCTTGCCGAAGCTCACGTC
ACTTAACACAGTAATAACCCACAGGCTAATGCGCCACGCTCGCCGGACTC
GGTCCCGTTGCGGTCCACCCTAAATACCTGCCTGGTACCCGTTAGGGCGT
TTTGGTCCTCGGATTTTTTTTGTTTGTTTTTTTGCAGCAGTATTTTAGCA
CACACCTAACAGTACAGTATGTCGACCGGAGCTTTAGGCAAGTTTGTGTT
AAGGTTAGGGTTAGTTCTTGAAGTTGTTCCGACTTGCTGAACAGCCCGCG
TTGGTACTGTTGCTGTAGTACTAGTAGGCAACCACGGTGTTGCCCGTGCA
ATGTGCGCTCGAAGGGGGAGTGACATCGTACCCCAACCCAACCCAATCCG
AACAAAGCAGCCTCCGTGTAGAAAACAAGGAAAAGGACGAAGGACGGGGG
GGGGAAAAAACTTGATTTAAAGTACTAAAATCCGTGACCCTTACGGTAGA
GTAGGTTATAGAGATAATAAAACCAACATCCTAATGATCAGGTCGATAGG
TGTGTGCAAGGGGGGCTCTGTTTTTGTCGAGTGTGGGGGTGTATGTGGCG
TGGTCGGCCCGGCTCTGCCCGAACGAAACCTTGGCCTTCGCTTGCAGTTA
CGAGTATACTTTCAGTATACGAAGTATGATAAGTGTTGTGCGGAATATAG
AGTATCGAAGTATGATAAGTGTTGTGCGGAATATAGAGTATCGATTTGTT
CTTGTCGTAGTTTGTATTTTTACGTAAGTGCCTCTCGGTACGATTATTAG
ATGCATCGTGTGTGGTGTGTGTGTAATCTCGGTGGAGACAAGCAGTAGGG
AGTATGATAGGGACAGACCATCAGCCATGAAAATACGGGTATTTTTTTTT
TTGGTCGTTTAGCCGTATGCGCGCAAGAAGCGGCTTGGCCGGACAAAGCA
CCACACACACAAAAGCACTCACGGCTTATCTCACTTACGCGGAACAAGCA
CTAAAAGTCGCACAGAAAGTAGTTAAAACACAATCTGCGCCTGCCACGGA
AACCCCGTCGGCACCTAAGCTTTGCTTTTTTGCCTTTTCGTGACATTTTA
TTGACAACAAATTTTGGCTAATTATTGTTATGCTCTTGTCCTCCCATGAT
TTCCCGCCATACTTTTATTTATCTTGGCTGGCGCGCATAGCCGAGGGAGT
CTTACGGGGTTGTGGGTGGGGGCAACAGGCCCTCGGAAGAGGGGCAGGAA
GTCATCGAGCCGCCTGGCTCTCCCAGGAGGCGGTGGCAGCGCTGGATGGG
C
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10308:2823..7623+

>mRNA_D-dudresnayi_contig10308.337.1 ID=mRNA_D-dudresnayi_contig10308.337.1|Name=mRNA_D-dudresnayi_contig10308.337.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=510bp|location=Sequence derived from alignment at D-dudresnayi_contig10308:2823..7623+ (Desmarestia dudresnayi DdudBR16 monoicous)
GAAGGCGGGGATAACGACCAGAGCTCTAATGCTGGGGACTCTCCTTCTGT
CTTGGCGACGCCAACGGAAGGCGGGGATAACGACCAGAGCTCTAATGCTG
GGGACTCTCCTTCTGTCTTGGCGACGCCAACGCGAGCTAGATCGGGACGA
TCAGTCGGCGCCCCGCGTTCTGCCGGACGGAAAGCCCACCACCGTCCTAG
GAGCAAGAAGCGAGCTAGATCGGGACGATCAGTCGGCGCCCCGCGTTCTG
CCGGACGGAAAGCCCACCACCGTCCTAGGAGCAAGAAGCCGAGGGAGTCT
TACGGGGTTGTGGGTGGGGGCAACAGGCCCTCGGAAGAGGGGCAGGAAGT
CATCGAGCCGCCTGGCTCTCCCAGGAGGCGGTGGCAGCGCTGGATGGGCC
CGAGGGAGTCTTACGGGGTTGTGGGTGGGGGCAACAGGCCCTCGGAAGAG
GGGCAGGAAGTCATCGAGCCGCCTGGCTCTCCCAGGAGGCGGTGGCAGCG
CTGGATGGGC
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