mRNA_D-dudresnayi_contig10297.325.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10297.325.1
Unique NamemRNA_D-dudresnayi_contig10297.325.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: A0A7S0ST95_9STRA (Cilia- and flagella-associated protein 36 n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0ST95_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.900e-39
Identity = 66/100 (66.00%), Postives = 78/100 (78.00%), Query Frame = 1
Query:    4 FKQFFADHSHLFIDAPQELGGEQNLEYYALFQKYLQLYETVLSKYIESLDVSVNEFYRELMEVRDDPNIKDKKLLHFVNYIVASTDYESFYKIMGRAAKK 303
            FK F  DH  LFI+AP     EQNLEYY LFQ+YL+LYET+LS YI SLD +V EFY +L ++ +D NIKDKKLLHFVNY++A TDY SFYKIM RAA+K
Sbjct:   12 FKDFINDHCILFINAPTTPSEEQNLEYYELFQRYLKLYETILSDYINSLDCTVEEFYEQLADILNDTNIKDKKLLHFVNYLIACTDYPSFYKIMTRAARK 111          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: A0A482SYF5_9ARCH (ARL2_Bind_BART domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SYF5_9ARCH)

HSP 1 Score: 128 bits (321), Expect = 6.770e-36
Identity = 58/101 (57.43%), Postives = 81/101 (80.20%), Query Frame = 1
Query:    1 VFKQFFADHSHLFIDAPQELGGEQNLEYYALFQKYLQLYETVLSKYIESLDVSVNEFYRELMEVRDDPNIKDKKLLHFVNYIVASTDYESFYKIMGRAAKK 303
            V K+F+AD++  F++AP ++ GEQNLEYYA+FQ+YL+L+E  L +YI++  V   EFYR L  ++ +P IKDKKLL+FV+Y+VAS DYE+FYK+M RAAKK
Sbjct:   17 VLKKFYADNADAFLEAPLQIAGEQNLEYYAIFQRYLRLFEQSLQEYIDNAGVGTTEFYRALQTIQGNPEIKDKKLLYFVDYLVASADYEAFYKMMVRAAKK 117          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: A0A7S2AWK6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AWK6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.700e-18
Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 1
Query:    1 VFKQFFADHSHLFIDAPQELGG-EQNLEYYALFQKYLQLYETVLSKYIES-LDVSVNEFYRELMEVRD----DPNIKDKKLLHFVNYIVASTDYESFYKIMGRAAKK 303
            VF+Q+F DH+  F      +G  E +LE +A+FQ+YLQLYE  LS+YIES L  S  EFY EL + +D    DP   D     F+  +VAS DY+SFYK+M R A+K
Sbjct:   43 VFRQYFRDHASDFRGMKVGMGSSEHSLEQHAVFQEYLQLYEDRLSEYIESQLGGSSKEFYEELADAKDVQARDPESCDAGTALFIECLVASADYDSFYKVMVREAQK 149          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: D8LNP3_ECTSI (ARL2_Bind_BART domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP3_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.520e-11
Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 1
Query:    1 VFKQFFADHSHLFIDAPQELGGEQNLEYYALFQKYLQLYETVLSKYIESLDVSVNEFYRELMEVRDDPNIKDKKLLHFVNYIVASTDYESFYKIMGRAAKK 303
            VF+ +F  H+ +F         E  LEY  LF +YL ++E  L ++IE    ++NEFY     +RD     D ++  F+N ++AS DY+SF+ +M + A+K
Sbjct:   39 VFRAYFRKHAEVFEVMADGKSEEHALEYQELFNEYLLIFEGKLEEFIEREGSTINEFYN---VIRDHQTNPDPQVQLFINCLLASADYDSFFNVMKKEAEK 136          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: A0A7S2UYU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYU1_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 6.480e-10
Identity = 32/100 (32.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:    1 VFKQFFADHSHLFIDAPQELGGEQNLEYYALFQKYLQLYETVLSKYIESLDVSVNEFYRELMEVRDDPNIKDKKLLHFVNYIVASTDYESFYKIMGRAAK 300
            VF+ +F +H++ F +  +    E +L +  LF+ YL+LYE  LS ++     S  EFY E+   ++     D     F++ ++AS DY SF+++M + AK
Sbjct:   78 VFRNYFKEHAYHFTEYAEGRTEEHDLAWQELFEDYLKLYEDTLSDFLRQEGYSDKEFYAEVAAAKETAT--DPATKQFIHCLLASCDYNSFFRVMVQMAK 175          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: A0A7S2HVG4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HVG4_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.110e-9
Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = 1
Query:    1 VFKQFFADHSHLF--IDAPQELGGEQNLE-------YYALFQKYLQLYETVLSKYIESLD----VSVNEFYRELMEVRDDPNIKDKKLLHFVNYIVASTDYESFYKIMGRAA 297
            VF+QFF DH+  F  +     L GE +L+        +  F++YL+LYE+ L+ YIE+       +V EFYREL +   + +  D+    F++ +VAS DY+SFY +M R A
Sbjct:   50 VFRQFFKDHAAHFRGMKRKDPLTGEWSLDTGTHSHQQHEDFEEYLKLYESQLADYIENHPDGPGATVTEFYREL-KAAQECDFADEGTQMFIDCLVASADYDSFYSVMVREA 160          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: A0A8K1CG21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG21_PYTOL)

HSP 1 Score: 59.7 bits (143), Expect = 3.250e-9
Identity = 33/106 (31.13%), Postives = 60/106 (56.60%), Query Frame = 1
Query:    1 VFKQFFADHSHLFIDAPQELGG--EQNLEYYALFQKYLQLYETVLSKYIESLDVSVNEFYRELMEVRDDPN---IKDKKLLHFVNYIVASTDYESFYKIMGRAAKK 303
            +F  F  +H+  F DA +   G  E   EY AL  KYL+L+E+ LS+++ES   ++ +F+RE  ++ +       ++ +   FV +++A  DY+ FY +M   A++
Sbjct:   21 LFDDFAREHADAFTDAVESKDGDVEHKHEYKALHDKYLELFESELSEFVESECCTIEDFFRECRDIVEGNYTALFEEHQYSWFVEHLLACMDYKHFYGLMVNEARR 126          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: A0A7S1U8T2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8T2_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.240e-6
Identity = 34/105 (32.38%), Postives = 53/105 (50.48%), Query Frame = 1
Query:   10 QFFADHSHLFIDA----PQELGGEQNLEYYALFQKYLQLYETVLSKYIESLDVSVNEFYRELMEVRDD---PNIKDKKLLHFVNYIVASTDYESFYKIMGRAAKK 303
            +F  DH+  F D     P     E  LE+  L ++YL L+E  L+ ++   + S  EFY E    R D   P   + +   FV++++A+ +Y  F+K M R AKK
Sbjct:   56 RFAKDHARAFYDVADLDPDSEAVEHRLEWSELHREYLALFEHHLADFLAENNASEKEFYDECQWARQDMMEPLFSEHRHHWFVDWLLATLEYNHFFKKMQRVAKK 160          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: A0A7S1CNE6_9STRA (Cilia- and flagella-associated protein 36 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNE6_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.610e-6
Identity = 33/101 (32.67%), Postives = 54/101 (53.47%), Query Frame = 1
Query:    1 VFKQFFADHSHLFIDAPQ-ELGGEQN-LEYYALFQKYLQLYETVLSKYIESLDVSVNEFYRELMEVRDDPNIKDKKLLHFVNYIVASTDYESFYKIMGRAA 297
            V   F A+H   F+     ++ GE N LEY+A++QK+L L+E  L +++ +   S  EFY     V +  N        F+N ++A++DY SF ++M   A
Sbjct:   58 VIDGFIAEHCRKFVGCEDAQVEGEDNKLEYWAVYQKFLALFEEKLEEFLGAEGSSAREFYSMCKRVSNSGNNWGDDAT-FINLLIATSDYGSFIRLMKEEA 157          
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Match: K3WXW5_GLOUD (Cilia- and flagella-associated protein 36 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXW5_GLOUD)

HSP 1 Score: 49.3 bits (116), Expect = 8.830e-5
Identity = 28/95 (29.47%), Postives = 54/95 (56.84%), Query Frame = 1
Query:    4 FKQFFADHSHLFIDAPQELGGEQNLEYYALFQKYLQLYETVLSKYIESLDVSVNEFYRELMEVRDDPNIK-DKKLLHFVNYIVASTDYESFYKIM 285
            F+ FF  ++  F D       E  LEYYA++Q++ ++++  +  +++S +++  EF      VR    IK D+K   ++  ++AS DY++FY +M
Sbjct:   25 FEDFFLKNALKFTDEQ-----EHQLEYYAIYQRFQEMFDKRMEAFLQSENITEQEF-----GVRCQRAIKTDRKAEQYLEIVIASMDYDAFYSLM 109          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10297.325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A7S0ST95_9STRA2.900e-3966.00Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
A0A482SYF5_9ARCH6.770e-3657.43ARL2_Bind_BART domain-containing protein n=1 Tax=a... [more]
A0A7S2AWK6_9STRA1.700e-1847.66Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
D8LNP3_ECTSI1.520e-1134.65ARL2_Bind_BART domain-containing protein n=2 Tax=E... [more]
A0A7S2UYU1_9STRA6.480e-1032.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2HVG4_9STRA1.110e-937.50Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8K1CG21_PYTOL3.250e-931.13Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1U8T2_9STRA1.240e-632.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1CNE6_9STRA1.610e-632.67Cilia- and flagella-associated protein 36 (Fragmen... [more]
K3WXW5_GLOUD8.830e-529.47Cilia- and flagella-associated protein 36 n=1 Tax=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10297contigD-dudresnayi_contig10297:6100..6402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score68.2
Seed ortholog evalue2.6e-09
Seed eggNOG ortholog164328.Phyra97079
EggNOG free text desc.The ARF-like 2 binding protein BART
EggNOG OGs2C07X@1,2SBZW@2759,3QFQF@4776
COG Functional cat.S
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size303
Cds size303
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927528.506941-CDS-D-dudresnayi_contig10297:6099..64021622927528.506941-CDS-D-dudresnayi_contig10297:6099..6402Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10297 6100..6402 +
1690556793.834993-CDS-D-dudresnayi_contig10297:6099..64021690556793.834993-CDS-D-dudresnayi_contig10297:6099..6402Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10297 6100..6402 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10297.325.1prot_D-dudresnayi_contig10297.325.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10297 6100..6402 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10297.325.1

>prot_D-dudresnayi_contig10297.325.1 ID=prot_D-dudresnayi_contig10297.325.1|Name=mRNA_D-dudresnayi_contig10297.325.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=101bp
VFKQFFADHSHLFIDAPQELGGEQNLEYYALFQKYLQLYETVLSKYIESL
DVSVNEFYRELMEVRDDPNIKDKKLLHFVNYIVASTDYESFYKIMGRAAK
K
back to top

mRNA from alignment at D-dudresnayi_contig10297:6100..6402+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10297.325.1 ID=mRNA_D-dudresnayi_contig10297.325.1|Name=mRNA_D-dudresnayi_contig10297.325.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=303bp|location=Sequence derived from alignment at D-dudresnayi_contig10297:6100..6402+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTTTTCAAGCAGTTCTTTGCAGATCACTCTCATCTTTTTATTGATGCACC TCAAGAACTTGGTGGTGAACAAAATCTTGAATATTATGCTTTATTTCAAA AATACTTGCAATTATATGAAACCGTACTATCAAAGTATATTGAGTCTCTC GATGTCTCAGTAAATGAATTCTACAGAGAATTAATGGAAGTTAGAGATGA TCCTAATATCAAAGACAAGAAATTACTTCACTTTGTGAATTATATTGTTG CAAGTACAGATTACGAGAGTTTCTATAAGATTATGGGACGCGCTGCCAAG AAA
back to top

Coding sequence (CDS) from alignment at D-dudresnayi_contig10297:6100..6402+

>mRNA_D-dudresnayi_contig10297.325.1 ID=mRNA_D-dudresnayi_contig10297.325.1|Name=mRNA_D-dudresnayi_contig10297.325.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=606bp|location=Sequence derived from alignment at D-dudresnayi_contig10297:6100..6402+ (Desmarestia dudresnayi DdudBR16 monoicous)
GTTTTCAAGCAGTTCTTTGCAGATCACTCTCATCTTTTTATTGATGCACC
TCAAGAACTTGGTGGTGAACAAAATCTTGAATATTATGCTTTATTTCAAA
AATACTTGCAATTATATGAAACCGTACTATCAAAGTATATTGAGTCTCTC
GATGTCTCAGTAAATGAATTCTACAGAGAATTAATGGAAGTTAGAGATGA
TCCTAATATCAAAGACAAGAAATTACTTCACTTTGTGAATTATATTGTTG
CAAGTACAGATTACGAGAGTTTCTATAAGATTATGGGACGCGCTGCCAAG
AAAGTTTTCAAGCAGTTCTTTGCAGATCACTCTCATCTTTTTATTGATGC
ACCTCAAGAACTTGGTGGTGAACAAAATCTTGAATATTATGCTTTATTTC
AAAAATACTTGCAATTATATGAAACCGTACTATCAAAGTATATTGAGTCT
CTCGATGTCTCAGTAAATGAATTCTACAGAGAATTAATGGAAGTTAGAGA
TGATCCTAATATCAAAGACAAGAAATTACTTCACTTTGTGAATTATATTG
TTGCAAGTACAGATTACGAGAGTTTCTATAAGATTATGGGACGCGCTGCC
AAGAAA
back to top