mRNA_D-dudresnayi_contig10279.316.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10279.316.1
Unique NamemRNA_D-dudresnayi_contig10279.316.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: D8LDR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR8_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 2.060e-83
Identity = 218/515 (42.33%), Postives = 260/515 (50.49%), Query Frame = 1
Query:    1 GWTPLTKSTPSAMVPKNCKVNVTFPKKAAAAPSSDAPAGEQTRGR-TAVAKPVATN---------AALPAREFNSSSSRDNDN----AATVEGQERGWDRDA-------QVLALPWRRFDRDLDGGGFE---ILGRNLVVGGVPNSDEGTGLFTWDGSVLLAKYIEHQ--------------------------------VAVNTTSNAN--------------------SIFGTTEKLRA--IRVLELGCGTGLAGLAAAFAFGGRRGG--GDHNG----PLPPHAARL-----------------PSTEVEVVLTDLSYALNNARDNIVSNTESLEVVRAGVTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERLTEGWCGGGDRGHD----PVVETGRQQSESAQTFPEKAEKSASSSANDIENG---LQNGQRRRCWRWRRRRRVLLAYQWRSERTGRALLAELDKAFEVREIPPEECHPDYSPSRSLCLYEVVRRRQ 1221
            GWTPL+ ST S  +P+NC+V V    K         P    TR R T    P +++         A+LP+     +++ D       A TV+G     D  +       ++LALPWRRFD+DL G G E   I G  + +  V NS EGTGLFTWDG+VLLAKY+EH+                                V V    +A+                            +RA  IRVLELGCGTGLAGLAAAFAFG R  G  GD N     P PP   R                  P  +V VVLTDL YAL NAR N   N+ SLE V A V++ ELDWC+PLP+EL     FDLILAADVVWLD+LV PLVRTLERLT GW GGG         P    G Q+    +T    A   + +S  + E G    ++G R R    RR   VLLAYQWRSERTGRALL EL   F VREIP EECHPDY PS +LCL E VRR++
Sbjct:  103 GWTPLSVSTSSETIPRNCRVRVNIFAK---------PQATTTRCRQTTTEDPSSSSDGNSCKNLSASLPSGPARRNATFDGTAVPGAATTVDGTPLPEDESSLDPVAPGEMLALPWRRFDKDLGGEGEEGLKICGNRVAIRDVSNSSEGTGLFTWDGAVLLAKYLEHRAVAMRRDFCEQQPCHSTQPSYRHPEGAGHGSSVTVAAGDSADVXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAAPIRVLELGCGTGLAGLAAAFAFGRRHSGTSGDDNSEVNHPPPPSPCRRRNPLEGENDEGVAQCASPPAQVAVVLTDLEYALTNARANTFLNSSSLEAVGAEVSSIELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPGGGVDAWSAPLPPAPANGTQEERRNETGLA-ASFGSGASPQECELGGCAARSGGRPRPPAGRR---VLLAYQWRSERTGRALLEELGACFCVREIPAEECHPDYLPSSNLCLLEAVRRQE 604          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: A0A6H5L4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A1_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.620e-41
Identity = 91/175 (52.00%), Postives = 105/175 (60.00%), Query Frame = 1
Query:  739 ELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERLTEGWCGGGDRGH----DPVVETGRQQSESAQT----------FPEKAEKSASSSANDIENGLQNGQRRRCWRWRRRRRVLLAYQWRSERTGRALLAELDKAFEVREIPPEECHPDYSPSRSLCLYEVVRRRQ 1221
            ELDWC+PLP+EL     FDLILAADVVWLD+LV PLVRTLERLT GW  GG         P    G Q+ +  +T           P+K E    ++ +   +    G           RRVLLAYQWRSERTGRALL EL   F VREIPPEECHPDY PS +LCL E VRR++
Sbjct:    2 ELDWCRPLPRELSDKEAFDLILAADVVWLDDLVTPLVRTLERLTAGWPSGGVDASPAPLSPAAANGTQEEQRNETGLAARFGSGAVPQKCEGGGRAARSVGRSRPSAG-----------RRVLLAYQWRSERTGRALLEELGACFRVREIPPEECHPDYLPSTNLCLLEAVRRQE 165          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: A0A2R5GIM8_9STRA (Protein-lysine methyltransferase METTL21D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIM8_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.700e-29
Identity = 103/322 (31.99%), Postives = 143/322 (44.41%), Query Frame = 1
Query:  262 AQVLALPWRRFDRDLDGGGFEILGRNLVVGGVPNSDEGTGLFTWDGSVLLAKYIEHQVAVNTTSNANSIFGTTEKLRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVEVVLTDLSYALNNARDNIVSN---TESLEVVRAGVTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERLTEGWCGGGDRGHDPVVETGRQQSESAQTFPEKAEKSASSSANDIENGLQNGQRRRCWRWRRRRRVLLAYQWRSERTGRALLAELD-KAFEVREIPPEECHPDYSPSRSLCLYEVVRR 1215
            A VL L WR F  +   G  +I G+ L+V  V N+ EGTGL  WDGS++LAKY+EH V ++  +               RVLELGCGTG+ GLA+A    G                        V LTDL YAL NARDN   N   TE ++V     TA ELD     P+ +  G+    ILAADV+W+  LV P   TL R+            +P +E                                               +LLA+Q R+ RT   L AEL  ++F+++EI  ++ HP++  S+ + +Y + R+
Sbjct:    8 APVLLLGWREFAVNCSRGELKIAGKPLLVDEVANTGEGTGLVVWDGSIVLAKYVEHAVPLSPQA---------------RVLELGCGTGVVGLASAALGAGA-----------------------VYLTDLDYALGNARDNAARNEHLTERVQVFALDWTAEELD-----PRAVEHGN-LTHILAADVIWVPELVIPFADTLARIESA---------NPHIE----------------------------------------------HILLAHQTRAIRTDEILWAELKARSFQIQEISVQDFHPEFQ-SKRIKIYRLTRK 229          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: A0A8K1CNV0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNV0_PYTOL)

HSP 1 Score: 129 bits (324), Expect = 1.840e-29
Identity = 104/310 (33.55%), Postives = 141/310 (45.48%), Query Frame = 1
Query:  259 DAQVLALPWRRFDRDLDGGGFEILGRNLVVGGVPNSDEGTGLFTWDGSVLLAKYIEHQVAVNTTSNANSIFGTTEKLRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVEVVLTDLSYALNNARDNIVSNTESLEVVRAGVTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERLTEGWCGGGDRGHDPVVETGRQQSESAQTFPEKAEKSASSSANDIENGLQNGQRRRCWRWRRRRRVLLAYQWRSERTGRALLAELDK-AFEVREIPPEECHPDYSPSR 1185
            D   LALP R F  D   G F+I G  ++VG V NS  GTGL TWDGS++LAKY+EH+            FG  + L   RVLE+G GTGL G++A                       L   E +V+LTDL+Y ++N   N+    +  + ++A V   ELDW QP     +G  +FDLILA+DVVW++ LV PLV+TL+ L                                               ++N QR          RVL+++Q RS  T   L  EL+   F+ R +P  E HPD+   R
Sbjct:   97 DDTCLALPSRLFPVDTTQGEFQINGHAVLVGEVENSGLGTGLTTWDGSIVLAKYLEHR------------FGNGQ-LHGKRVLEVGAGTGLVGISAG----------------------LLGAE-QVLLTDLAYTMDNLARNVELTGQHAQQIKARVQPVELDWFQPRSD--LG--DFDLILASDVVWVEELVRPLVQTLQTL-----------------------------------------------VRNSQRST--------RVLMSHQTRSVLTDERLFRELEAHGFQRRLVPTAELHPDFVSDR 311          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: W7T984_9STRA (Nicotinamide N-methyltransferase, putative n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T984_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.290e-28
Identity = 90/225 (40.00%), Postives = 111/225 (49.33%), Query Frame = 1
Query:  259 DAQVLALPWRRFDRDLDGGGFEILGRNLVVGGVPNSDEGTGLFTWDGSVLLAKY-IEHQVAVNTTSNANSIFGTTEKLRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVEVVLTDLSYALNNARDNIVSNTESLEVVRAG----------VTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERLTEGWCGGGDRG 900
            D  VLALP RRF  DLDG G  +L   + V GV NS  GTGL TWDG+V+L+KY I+        S A +     E L+  +V+ELG GTGL GL+ A   G R                      EV+LTDL YAL N  DN+  N  +   +  G          V   E DW QP    L+ G   D+++AADVVWLD LV PL R L  +  G    G +G
Sbjct:  147 DKPVLALPGRRFPLDLDGEGIPVLDTRIFVKGVANSGLGTGLTTWDGAVVLSKYLIKQHTHATARSQAPTFDFEFEFLKGKKVVELGAGTGLVGLSCAV-LGAR----------------------EVILTDLPYALENLNDNVRRNVGAWRGLVQGPPGVGREEGRVAVEEGDWLQPPASSLVEG--VDVVVAADVVWLDELVPPLGRYLATILMGGGREGGKG 346          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: A0A2D4BQT1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQT1_PYTIN)

HSP 1 Score: 119 bits (299), Expect = 1.300e-26
Identity = 85/203 (41.87%), Postives = 107/203 (52.71%), Query Frame = 1
Query:  271 LALPWRRFDRDLDGGGFEILGRNLVVGGVPNSDEGTGLFTWDGSVLLAKYIEHQVAVNTTSNANSIFGTTEKLRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVEVVLTDLSYALNNARDNIVSNTESLEV----VRAGVTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERL 867
            LALP R FD D   GGF+I  R +VVG V NS  GTGL TWDGSV+LAKY+EH+          S F     ++  RVLE+G GTGL G++AA                      L +T+V  VLTDL Y + N + NI     + E     V A ++A  LDW  P           DLILA+DVVW+ +L+ PLV TL +L
Sbjct:   40 LALPARLFDVDTLSGGFKIKDRAVVVGEVENSGLGTGLTTWDGSVVLAKYLEHKY---------SAF-----MQGKRVLEVGAGTGLVGISAAL---------------------LGATDV--VLTDLEYVVANLQKNINMTLAAAEASAKPVDARISAQVLDWFNPRTDF----GRVDLILASDVVWVKDLIPPLVNTLRQL 201          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: A0A7S3Y8M1_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y8M1_9EUKA)

HSP 1 Score: 117 bits (294), Expect = 2.910e-25
Identity = 100/309 (32.36%), Postives = 135/309 (43.69%), Query Frame = 1
Query:  268 VLALPWRRFDRDLDGGGFEILGRNLVVGGVPNSD-EGTGLFTWDGSVLLAKYIEHQVAVNTTSNANSIFGTTEKLRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVEVVLTDLSYALNNARDNIVSNTESLEVVRAGVTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERLT-----EGWCGGGDRGHDPVVETGRQQSESAQTFPEKAEKSASSSANDIENGLQNGQRRRCWRWRRRRRVLLAYQWRSERTGRALLAEL-DKAFEVREIPPEECHPDY 1173
            +LALPW+ F  D   G   I G  LV+  + N+  +GTGL  WDGSV+LAKY+EH +A                ++   V+ELG GTGL GLAAA                            + VLTDL Y L N   NI +N  ++           LDW  P         + D I+A+DVVW+D LV PLV TL  L      +    G D   DP V   + + E  +      +KS++SS +D                R++  VLLA+Q RS  T   L   L D  F + E+  +  HP +
Sbjct:   81 ILALPWKIFPLDFASGELSIHGNPLVIREIANAGTDGTGLNIWDGSVVLAKYLEHSLAT--------------VIKGASVVELGSGTGLVGLAAAM------------------------LGAKTVLTDLPYTLKNIEANIKANAPAIAAHGGKANVKTLDWTTPQKHAKNLPKKIDFIIASDVVWVDWLVAPLVATLHYLVNQHNQQASPIGDD---DPAVPNSKPEKEVCEM-----KKSSASSRHDP--------------GRKKPLVLLAHQTRSTATDNHLWKLLSDGGFRIAEVNRDRHHPKF 329          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: A0A662YK58_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YK58_9STRA)

HSP 1 Score: 117 bits (292), Expect = 8.100e-25
Identity = 100/315 (31.75%), Postives = 133/315 (42.22%), Query Frame = 1
Query:  259 DAQVLALPWRRFDRDLDGGG-FEILGRNLVVGGVPNSDEGTGLFTWDGSVLLAKYIEHQVAVNTTSNANSIFGTTEKLRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVEVVLTDLSYALNNARDNIVSNTESLE----VVRAGVTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERLTEGWCGGGDRGHDPVVETGRQQSESAQTFPEKAEKSASSSANDIENGLQNGQRRRCWRWRRRRRVLLAYQWRSERTGRALLAELDK-AFEVREIPPEECHPDYSPSR 1185
            D + LALP R F  D++ G  F I G+ +V+G V NS +GTGL TWDGSV+LAKY+EHQ           I G+       RV+ELG GTGL G++AA   G R                      EV+LTDL Y ++N   N+    + L      V   V+   LDW  P P +L      D +LA+DVVW++ L+ PLV T + L           H  V                                              + R+L+AYQ RS  + R L  EL+        +P    HPD+S  R
Sbjct:  134 DQECLALPSRIFGLDIEAGERFAIDGKAVVIGEVGNSGQGTGLTTWDGSVVLAKYLEHQ-------RRRDIAGS-------RVVELGSGTGLVGISAAL-LGAR----------------------EVILTDLDYVVDNLAKNVAQTLQLLANEGGKVECKVSTQILDWFSP-PDDL---GNIDFLLASDVVWVEELIPPLVTTFDVLLR---------HSTV----------------------------------------------KTRILMAYQKRSIVSDRLLFHELESHGLTKARVPAASLHPDFSTDR 352          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: A0A1V9ZKV6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKV6_9STRA)

HSP 1 Score: 116 bits (290), Expect = 8.510e-25
Identity = 77/202 (38.12%), Postives = 97/202 (48.02%), Query Frame = 1
Query:  268 VLALPWRRFDRDLDGGGFEILGRNLVVGGVPNSDEGTGLFTWDGSVLLAKYIEHQVAVNTTSNANSIFGTTEKLRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVEVVLTDLSYALNNARDNIVSNTESLEVV--RAGVTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERL 867
            V A+  R F+ D + G   I G  L +G V N+ +GTGL  WDGSV+LAKY+E Q A           G    +  +RVLELG GTGL GLAAAF                            V+LTDL+Y L N   NI  N   L        V A ELDW  P         + D+IL +D+VW++ L+  LV T+ERL
Sbjct:  103 VAAIASRGFNYDFEAGEMTIHGEPLFIGEVGNTGQGTGLTIWDGSVVLAKYLEGQQA-----------GDAHNVAGLRVLELGAGTGLVGLAAAFCGAS-----------------------SVLLTDLAYTLPNTESNIARNEARLRAKFPDQNVDAAELDWFAPGDMP-----DVDIILGSDIVWVETLIPALVTTIERL 265          
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Match: A0A418B4Q7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B4Q7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.080e-24
Identity = 75/203 (36.95%), Postives = 108/203 (53.20%), Query Frame = 1
Query:  268 VLALPWRRFDRDLDGGGFEILGRNLVVGGVPNSDEGTGLFTWDGSVLLAKYIEHQVAVNTTSNANSIFGTTEKLRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVEVVLTDLSYALNNARDNIVSNTESLEVVRAGVTATELDWCQPLPQELIGGHEFDLILAADVVWLDNLVDPLVRTLERLTEG 876
            VLA+  R F    + G F + G  L +G V N+ +GTGL  WDGSV+LA+Y+EH V+++         G  + +R  RVLELG GTGL GLAA+        G  H                 V LTDL+YAL N   N+  N  ++    A V  +ELDW  P       G   D+++ +D+VW+++L++PLV+T+  L +G
Sbjct:  120 VLAIASRSFGFAFERGEFRVHGVPLYIGEVGNTGKGTGLTIWDGSVVLARYLEH-VSLSV--------GHDDNVRGKRVLELGAGTGLVGLAASLC------GASH-----------------VTLTDLAYALENLSRNVELNRGAISP--AAVAVSELDWFAPQSSSFTDG--VDMVVGSDIVWVESLIEPLVQTIAVLLKG 286          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10279.316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR8_ECTSI2.060e-8342.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4A1_9PHAE1.620e-4152.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2R5GIM8_9STRA1.700e-2931.99Protein-lysine methyltransferase METTL21D n=1 Tax=... [more]
A0A8K1CNV0_PYTOL1.840e-2933.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W7T984_9STRA1.290e-2840.00Nicotinamide N-methyltransferase, putative n=2 Tax... [more]
A0A2D4BQT1_PYTIN1.300e-2641.87Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S3Y8M1_9EUKA2.910e-2532.36Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A662YK58_9STRA8.100e-2531.75Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A1V9ZKV6_9STRA8.510e-2538.12Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A418B4Q7_9STRA1.080e-2436.95Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10279contigD-dudresnayi_contig10279:2783..6566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score118.6
Seed ortholog evalue6.5e-24
Seed eggNOG ortholog42099.EPrPV00000020168
Preferred nameVCPKMT
KEGG koko:K21804,ko:K21806
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0019899,GO:0032259,GO:0032780,GO:0032991,GO:0036211,GO:0043086,GO:0043170,GO:0043412,GO:0043414,GO:0043462,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051117,GO:0051336,GO:0051346,GO:0065007,GO:0065009,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.Rapid response to glucose protein. Source PGD
EggNOG OGs1ME1N@121069,KOG2793@1,KOG2793@2759
COG Functional cat.A
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-19_001710.1
Exons5
Model size1916
Cds size1194
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927527.6248114-UTR-D-dudresnayi_contig10279:2782..34681622927527.6248114-UTR-D-dudresnayi_contig10279:2782..3468Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10279 2783..3468 -
1690556793.3642905-UTR-D-dudresnayi_contig10279:2782..34681690556793.3642905-UTR-D-dudresnayi_contig10279:2782..3468Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10279 2783..3468 -
1622927527.7006648-UTR-D-dudresnayi_contig10279:6530..65661622927527.7006648-UTR-D-dudresnayi_contig10279:6530..6566Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10279 6531..6566 -
1690556793.4205978-UTR-D-dudresnayi_contig10279:6530..65661690556793.4205978-UTR-D-dudresnayi_contig10279:6530..6566Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10279 6531..6566 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927527.6386344-CDS-D-dudresnayi_contig10279:3468..35431622927527.6386344-CDS-D-dudresnayi_contig10279:3468..3543Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 3469..3543 -
1690556793.3766546-CDS-D-dudresnayi_contig10279:3468..35431690556793.3766546-CDS-D-dudresnayi_contig10279:3468..3543Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 3469..3543 -
1622927527.653793-CDS-D-dudresnayi_contig10279:4455..47121622927527.653793-CDS-D-dudresnayi_contig10279:4455..4712Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 4456..4712 -
1690556793.3886237-CDS-D-dudresnayi_contig10279:4455..47121690556793.3886237-CDS-D-dudresnayi_contig10279:4455..4712Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 4456..4712 -
1622927527.6668878-CDS-D-dudresnayi_contig10279:4901..50211622927527.6668878-CDS-D-dudresnayi_contig10279:4901..5021Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 4902..5021 -
1690556793.39908-CDS-D-dudresnayi_contig10279:4901..50211690556793.39908-CDS-D-dudresnayi_contig10279:4901..5021Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 4902..5021 -
1622927527.6783428-CDS-D-dudresnayi_contig10279:5397..57821622927527.6783428-CDS-D-dudresnayi_contig10279:5397..5782Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 5398..5782 -
1690556793.4063048-CDS-D-dudresnayi_contig10279:5397..57821690556793.4063048-CDS-D-dudresnayi_contig10279:5397..5782Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 5398..5782 -
1622927527.6884592-CDS-D-dudresnayi_contig10279:6173..65301622927527.6884592-CDS-D-dudresnayi_contig10279:6173..6530Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 6174..6530 -
1690556793.413359-CDS-D-dudresnayi_contig10279:6173..65301690556793.413359-CDS-D-dudresnayi_contig10279:6173..6530Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10279 6174..6530 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10279.316.1prot_D-dudresnayi_contig10279.316.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10279 3469..6530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10279.316.1

>prot_D-dudresnayi_contig10279.316.1 ID=prot_D-dudresnayi_contig10279.316.1|Name=mRNA_D-dudresnayi_contig10279.316.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=398bp
MVPKNCKVNVTFPKKAAAAPSSDAPAGEQTRGRTAVAKPVATNAALPARE
FNSSSSRDNDNAATVEGQERGWDRDAQVLALPWRRFDRDLDGGGFEILGR
NLVVGGVPNSDEGTGLFTWDGSVLLAKYIEHQVAVNTTSNANSIFGTTEK
LRAIRVLELGCGTGLAGLAAAFAFGGRRGGGDHNGPLPPHAARLPSTEVE
VVLTDLSYALNNARDNIVSNTESLEVVRAGVTATELDWCQPLPQELIGGH
EFDLILAADVVWLDNLVDPLVRTLERLTEGWCGGGDRGHDPVVETGRQQS
ESAQTFPEKAEKSASSSANDIENGLQNGQRRRCWRWRRRRRVLLAYQWRS
ERTGRALLAELDKAFEVREIPPEECHPDYSPSRSLCLYEVVRRRQRL*
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mRNA from alignment at D-dudresnayi_contig10279:2783..6566-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10279.316.1 ID=mRNA_D-dudresnayi_contig10279.316.1|Name=mRNA_D-dudresnayi_contig10279.316.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=3784bp|location=Sequence derived from alignment at D-dudresnayi_contig10279:2783..6566- (Desmarestia dudresnayi DdudBR16 monoicous)
GGCTGGACCCCTCTGACAAAGTCAACGCCGTCGGCGATGGTTCCCAAGAA CTGCAAGGTGAACGTTACTTTTCCGAAAAAAGCCGCCGCCGCCCCTTCGA GTGATGCGCCTGCCGGCGAGCAAACGAGGGGGAGGACTGCCGTCGCTAAA CCTGTCGCTACCAATGCCGCGTTGCCGGCGAGAGAGTTCAACAGCAGCAG TTCTCGTGACAACGACAACGCGGCGACGGTCGAAGGGCAGGAGCGGGGAT GGGACCGAGATGCCCAGGTACTCGCTCTTCCGTGGAGGCGTTTTGACCGA GATCTGGATGGGGGCGGGTTCGAGATTCTCGGGAGGAACCTAGTGGTAGG GGGCGTTCCGAACTCTGACGAAGGCACCGGATTATTTACATGGGTGAGTT CACGTGGTTGGGTTCGTACGTTAAGGACAGGGTGATGCGATATGGACCGT TACGCCTTCCTTTCGAACTTTGTGAACGCGTGTATTCGTTACTTGTAATG CTCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCGGC GGGGCGGGGGGGGGCGTGGCCCGGGCCACCCCAGGGGGGGCCCCGGGTGG CGCGGAAAGNNNNNNNNNNTGAGAAGCGGGGGGTTGGGTATGTCCCCTTT TCCCCCTCTTTCCCCTCTTTTTTACCGCGGTTTTTTTTTTTTTTTTTCTC TCCCCCCCCCCCCCCCCCCCCCCCTCCCTCCCCCCTTCTCCCTCGCGGCG CGCACGTTTGGGGATTTCCCGGGAAAACCCAAAGGATGGCTCCGTGTTGC TAGCGAAGTACATCGAGCACCAAGTCGCAGTCAACACAACCAGTAACGCC AACAGTATATTCGGCACCACCGAAAAGTTGCGGGCGATTCGGGTGCTAGA GCTCGGCTGCGGCACGGGTCTCGCAGGTCTTGCAGCAGCGTTTGCCTTTG GGGGGAGGCGGGGGGGTGGAGACCATAACGGCCCACTACCGCCCCACGCT GCCCGCCTTCCTTCAACGGAAGTGGAGGTTGTGTTGACGGATCTATCGTA CGCTCTAAACAACGCGCGGGACAATATTGTTTCCAACACGGAGTCGCTAG AAGTTGTCCGAGCGGGAGTTACAGCGACGGAGCTTGACTGGTGCCAACCG CTACCGCAAGAGCTCATCGGTGAGAGAGCCTGTAGTTTATCGCCACGCAC TGCACGCAAGCTTTTGAAAAGGAACACACACGCTGCTCTGCTTCTCCTCG TTCGTGATAAAAACAAAATCTACTCGTTTTGTACAGCGTCCGTCCCGAAT GGAGACGATGCCACGCTTGAATACGAAGTTACACGTTCTAGCGGCAAGAC CGCCCTACCCCCCTGTGACCACCCTGTTTTCCCGCTGCTGTCAACGATCT CCCTTCCCGCCACCATCATCGATGAAAACTACAAGAATGGCCCATCAAAC TGACCACTTGTGTTGTGCCGTTTCGAATCAATACTTGAAGTCTCTTATAC CTCATCTTTGGCCGTTCGCCCCGACCGGATCTTTCCTCTTCACAGGTGGC CACGAGTTCGACCTTATCCTCGCCGCCGATGTTGTGTGGCTGGATAATCT TGTGGACCCTCTAGTGCGCACGTTAGAGCGTCTCACCGAAGGCTGGTGCG GTGGTGGCGACAGGGGTGGCTGCGGCCGCGGCGATGAAGATTGCAGCAAA GAAGGCAACGGTAGCAGAAGAGGCGGTGAGGCGGCAATGCCAAAGGAAAG GCATGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGAGTTCAGGTCTCG GTCTTGGGCCCGTATTTCTGCCGGAAAGCAACTTTCGGACGGATGATACG GCAGGACACGACCCGGTAGTGGAGACCGGTCGACAGCAGAGTGAATCGGC GCAGACCTTTCCCGAGAAGGCCGAAAAATCCGCCTCGTCATCAGCGAACG ACATCGAGAACGGTCTGCAGAACGGTCAGCGGCGGAGGTGCTGGAGGTGG CGGCGGCGACGGCGGGTGTTGTTGGCGTACCAGTGGAGGAGCGAGCGTAC CGGCCGGGCGCTGCTCGCGGAACTGGATAAGGCCTTTGAAGTCCGAGAGA TTCCGCCCGAGGTATGGAGGCGTTTTGCCAATGTCAATAGACCAGTTGCA TTAAGAAAAGAAATGAAAAAACGCTCAGGGGGGAACTTGCGTGGGGAAAA AAGTTTTGTTCCGTGCGATTTCATTTCCTCCTATGGTGATTCTTGCAAGT GGTCTGTGCTACTCACATACGAAGTATGACCAACAGAACCGTGGTAGATA CACGCCAGCCCCGTGTGAGAGTGTTGTGTTGTGCTGTACTGTAGTATTAT ATGGCAGCTTTTTTGTCTGGTTTTTGGTTTTTCAGCTATTAATAACACAA TTGTTGAAATAATGTCGTGTTATGATTGGTAGCTCTATAGTCTAATATAG TAATAGTTGTGGCGTGAGTTTTGCCGGGAGAAAAATGAAGCATGAGCATA ATAGCCTACTTGTGGTACTGTATTTCCCTTTTTGCCAGACGATTTTTTTT CAGCAAACAAAACGTGAATATTTGCTGGTATACTTGGTATATATCATACC TGGTACATATATATATACTTCAAGTATGTGTTGCAGTGAACTAACCGTCT TTGGTGTGTTTTAAGTTTAAAACACGCTGTTAATAGGTGTACGGGGCCGC CTGCGGGGGGGGGAGGGGGTATAATATGTCAAAAACGAAAATTGCGCCGA AATGTTGGAGATGTCTCTATTAGGATTAGCATCGGGGATCGGTCTCGAAA GGGATGCGTGGTCAATGGTCAAATGACTAAGGCAAGCAACAAAATGAGGG ATACTGTCCTTTCTGTCACACATGACAGAATGGTCACCAACAGCTTGAAA AATGAAAAGGATTGACGAAAAAATGTTCAAAATACGAAATATGCAACTTT GTGTTTTTAACGAAATTTAATCCTTCCCCCCCCCTTCCTCGCTGCGCTTC CCACACCGCCTCATTATATGTAGGAGTGCCACCCGGACTACTCCCCATCC CGCAGCCTCTGTTTGTATGAGGTGGTGCGTCGACGGCAACGGTTGTGACG AACTTTTCTTTGTTTAACCATTGTCCTCCGGCAGATGGGCATGGATTGTT GAAGTCCAGTGAACCTATTGTCAGATATAAGTATCACACAGTAGTGAGGT TGACGATTATCCCCTGGCCCCCCGAACCAGTTTGGAACGTCACGGCTGAT GCATTTGTAGTAAAAAGTAATACCTGGTGGTAGTAGTTATGCTACGGAAT ATGTTGTGCACGTTGTCGGATGGCCGAAAAGAATGAATATAGTAATAATG ATAATGGGTTAAAATACGGTTTAAGGTCCACATGTTTCCGCGGCTTTCAG TGGCCGCTTCGTGATCAACCATTGCTGATTTAATCCTGTTCAACCATTGT AGAAACACAAACGTTGCGACTACAGCACGGTTGAGTACGTCGGAGGTCCG TTGACCTTGTTGGAGATGGTTACTGTGCCTGAAGAGACAAAACGTTGAAC GGACGTTACACCCCCGGGGTATTGTAGTGTGGAGTTTTGCTGCAAAAGCT CACCCCACTGACGACTAAACATGTCTTGCTGTCTGTTGTTACCGGAGTCA TGGAGAGTTTTTTGTTTTGTTTTTTATGCGCATGTTTTACCGGATAATTA CGGCGACTATCTCAGCTTGTCGTCGACTATTGGAAGATGACATATGAACT GATTGGTTAGTTGGTTGGTTGATCGGTTAGTTGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10279:2783..6566-

>mRNA_D-dudresnayi_contig10279.316.1 ID=mRNA_D-dudresnayi_contig10279.316.1|Name=mRNA_D-dudresnayi_contig10279.316.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2388bp|location=Sequence derived from alignment at D-dudresnayi_contig10279:2783..6566- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGGTTCCCAAGAACTGCAAGGTGAACGTTACTTTTCCGAAAAAAGCCGC
CGCCGCCCCTTCGAGTGATGCGCCTGCCGGCGAGCAAACGAGGGGGAGGA
CTGCCGTCGCTAAACCTGTCGCTACCAATGCCGCGTTGCCGGCGAGAGAG
TTCAACAGCAGCAGTTCTCGTGACAACGACAACGCGGCGACGGTCGAAGG
GCAGGAGCGGGGATGGGACCGAGATGCCCAGGTACTCGCTCTTCCGTGGA
GGCGTTTTGACCGAGATCTGGATGGGGGCGGGTTCGAGATTCTCGGGAGG
AACCTAGTGGTAGGGGGCGTTCCGAACTCTGACGAAGGCACCGGATTATT
TACATGGATGGTTCCCAAGAACTGCAAGGTGAACGTTACTTTTCCGAAAA
AAGCCGCCGCCGCCCCTTCGAGTGATGCGCCTGCCGGCGAGCAAACGAGG
GGGAGGACTGCCGTCGCTAAACCTGTCGCTACCAATGCCGCGTTGCCGGC
GAGAGAGTTCAACAGCAGCAGTTCTCGTGACAACGACAACGCGGCGACGG
TCGAAGGGCAGGAGCGGGGATGGGACCGAGATGCCCAGGTACTCGCTCTT
CCGTGGAGGCGTTTTGACCGAGATCTGGATGGGGGCGGGTTCGAGATTCT
CGGGAGGAACCTAGTGGTAGGGGGCGTTCCGAACTCTGACGAAGGCACCG
GATTATTTACATGGGATGGCTCCGTGTTGCTAGCGAAGTACATCGAGCAC
CAAGTCGCAGTCAACACAACCAGTAACGCCAACAGTATATTCGGCACCAC
CGAAAAGTTGCGGGCGATTCGGGTGCTAGAGCTCGGCTGCGGCACGGGTC
TCGCAGGTCTTGCAGCAGCGTTTGCCTTTGGGGGGAGGCGGGGGGGTGGA
GACCATAACGGCCCACTACCGCCCCACGCTGCCCGCCTTCCTTCAACGGA
AGTGGAGGTTGTGTTGACGGATCTATCGTACGCTCTAAACAACGCGCGGG
ACAATATTGTTTCCAACACGGAGTCGCTAGAAGTTGTCCGAGCGGGAGTT
ACAGCGACGGAGCTTGACTGGTGCCAACCGCTACCGCAAGAGCTCATCGG
ATGGCTCCGTGTTGCTAGCGAAGTACATCGAGCACCAAGTCGCAGTCAAC
ACAACCAGTAACGCCAACAGTATATTCGGCACCACCGAAAAGTTGCGGGC
GATTCGGGTGCTAGAGCTCGGCTGCGGCACGGGTCTCGCAGGTCTTGCAG
CAGCGTTTGCCTTTGGGGGGAGGCGGGGGGGTGGAGACCATAACGGCCCA
CTACCGCCCCACGCTGCCCGCCTTCCTTCAACGGAAGTGGAGGTTGTGTT
GACGGATCTATCGTACGCTCTAAACAACGCGCGGGACAATATTGTTTCCA
ACACGGAGTCGCTAGAAGTTGTCCGAGCGGGAGTTACAGCGACGGAGCTT
GACTGGTGCCAACCGCTACCGCAAGAGCTCATCGGTGGCCACGAGTTCGA
CCTTATCCTCGCCGCCGATGTTGTGTGGCTGGATAATCTTGTGGACCCTC
TAGTGCGCACGTTAGAGCGTCTCACCGAAGGCTGGTGCGGTGGTGGCGAC
AGGGGTGGCCACGAGTTCGACCTTATCCTCGCCGCCGATGTTGTGTGGCT
GGATAATCTTGTGGACCCTCTAGTGCGCACGTTAGAGCGTCTCACCGAAG
GCTGGTGCGGTGGTGGCGACAGGGGACACGACCCGGTAGTGGAGACCGGT
CGACAGCAGAGTGAATCGGCGCAGACCTTTCCCGAGAAGGCCGAAAAATC
CGCCTCGTCATCAGCGAACGACATCGAGAACGGTCTGCAGAACGGTCAGC
GGCGGAGGTGCTGGAGGTGGCGGCGGCGACGGCGGGTGTTGTTGGCGTAC
CAGTGGAGGAGCGAGCGTACCGGCCGGGCGCTGCTCGCGGAACTGGATAA
GGCCTTTGAAGTCCGAGAGATTCCGCCCGAGGACACGACCCGGTAGTGGA
GACCGGTCGACAGCAGAGTGAATCGGCGCAGACCTTTCCCGAGAAGGCCG
AAAAATCCGCCTCGTCATCAGCGAACGACATCGAGAACGGTCTGCAGAAC
GGTCAGCGGCGGAGGTGCTGGAGGTGGCGGCGGCGACGGCGGGTGTTGTT
GGCGTACCAGTGGAGGAGCGAGCGTACCGGCCGGGCGCTGCTCGCGGAAC
TGGATAAGGCCTTTGAAGTCCGAGAGATTCCGCCCGAGGAGTGCCACCCG
GACTACTCCCCATCCCGCAGCCTCTGTTTGTATGAGGTGGTGCGTCGACG
GCAACGGTTGTGAGAGTGCCACCCGGACTACTCCCCATCCCGCAGCCTCT
GTTTGTATGAGGTGGTGCGTCGACGGCAACGGTTGTGA
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