mRNA_D-dudresnayi_contig10278.314.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10278.314.1
Unique NamemRNA_D-dudresnayi_contig10278.314.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10278.314.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10278contigD-dudresnayi_contig10278:904..1985 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-18_004420.1
Exons3
Model size444
Cds size444
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10278.314.1prot_D-dudresnayi_contig10278.314.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10278 904..1985 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927527.4896817-CDS-D-dudresnayi_contig10278:903..10771622927527.4896817-CDS-D-dudresnayi_contig10278:903..1077Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10278 904..1077 -
1690556793.2941802-CDS-D-dudresnayi_contig10278:903..10771690556793.2941802-CDS-D-dudresnayi_contig10278:903..1077Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10278 904..1077 -
1622927527.5092318-CDS-D-dudresnayi_contig10278:1444..16141622927527.5092318-CDS-D-dudresnayi_contig10278:1444..1614Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10278 1445..1614 -
1690556793.3033218-CDS-D-dudresnayi_contig10278:1444..16141690556793.3033218-CDS-D-dudresnayi_contig10278:1444..1614Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10278 1445..1614 -
1622927527.527573-CDS-D-dudresnayi_contig10278:1885..19851622927527.527573-CDS-D-dudresnayi_contig10278:1885..1985Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10278 1886..1985 -
1690556793.312763-CDS-D-dudresnayi_contig10278:1885..19851690556793.312763-CDS-D-dudresnayi_contig10278:1885..1985Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10278 1886..1985 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10278.314.1

>prot_D-dudresnayi_contig10278.314.1 ID=prot_D-dudresnayi_contig10278.314.1|Name=mRNA_D-dudresnayi_contig10278.314.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=148bp
MSLDEFKRQVQNQFTVVLSWDEVRALQKLYGDPDSGTIDFLKFAVALGKS
PGHGHDKTRQAYNFLPKHTMENDLKAIEKKIVHKLEDRCEVAGNYQYQWA
RRMLCDSISTMAGGVDKAQLKLRLSGLLGVELSDGEMEVLFRKYADP*
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mRNA from alignment at D-dudresnayi_contig10278:904..1985-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10278.314.1 ID=mRNA_D-dudresnayi_contig10278.314.1|Name=mRNA_D-dudresnayi_contig10278.314.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1082bp|location=Sequence derived from alignment at D-dudresnayi_contig10278:904..1985- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCATTGGACGAATTCAAGCGGCAGGTGCAAAACCAATTCACCGTGGT
GCTTAGCTGGGACGAAGTGAGGGCCCTACAGAAGCTCTATGGCGACCCAG
GTACTGTACCAGTGTAGTATTTTGCATTGGCAAAACACTCACTCGACATA
AACCCATATCGCGTGTGGGCAGTGAATGACGCAGGATGCTTCCGCTACGG
GACCCGAACAGATATCTTGTTCATTTCTCAAACGGACACCATAATACAGA
ATTTTGTAGCTCGCTGCTATAGTTTATTTTTCCGTAATGTGTGATTTGAG
GCCCTGATGCAATTGACCGCACCGTGTGCTTCCGCCCTCTATCATTGTGT
ATTTGTATGCCCCCTCGGCAGACTCCGGAACCATCGACTTCTTGAAGTTC
GCCGTCGCCCTTGGAAAGTCGCCGGGCCACGGCCACGACAAGACCAGGCA
GGCGTACAATTTCCTTCCGAAGCATACGATGGAGAACGACCTCAAAGCTA
TCGAAAAGAAGATCGTCCATAAGCTCGAGGATCGGTGTGAGGTAAGTTTG
GCGCACACAGCAATACAAGTCGTGCTTGGATGACGACGATGTCCACTGAA
TTACTCTCAATCCAACGTTGCGCGGGTATGATGTACATACGCATGAAGTG
TTACGCACGCTGTGTGGAGCAACGCAGACTGTGCGCAGCATATATACGTG
AAACGGGGCCTTACGCACTCGCGGACAAACAGGAAACATTTGCTAAATTG
CTCGGGCGTCGGTTGAGGCGCCAAAAATTGACTGGACTTCTCCCTAGCAT
GTGCAGCCTTGCCCCCAAACGCAGCGACCGATAAAACCACCACAATGTGC
ACCATGAAATTTCCATCTTCCCCTCCATAGTTTAATATTGTTGCGTTCTT
GTATCCAGGTTGCAGGGAACTACCAGTATCAGTGGGCTCGACGCATGCTC
TGTGACTCGATATCGACTATGGCGGGGGGGGTGGACAAGGCGCAGCTTAA
ACTGAGGCTTAGTGGTTTGCTAGGGGTGGAGCTGAGCGATGGAGAAATGG
AAGTTCTCTTCCGCAAATACGCCGACCCGTGA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10278:904..1985-

>mRNA_D-dudresnayi_contig10278.314.1 ID=mRNA_D-dudresnayi_contig10278.314.1|Name=mRNA_D-dudresnayi_contig10278.314.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=888bp|location=Sequence derived from alignment at D-dudresnayi_contig10278:904..1985- (Desmarestia dudresnayi DdudBR16 monoicous)
ATGTCATTGGACGAATTCAAGCGGCAGGTGCAAAACCAATTCACCGTGGT
GCTTAGCTGGGACGAAGTGAGGGCCCTACAGAAGCTCTATGGCGACCCAG
ATGTCATTGGACGAATTCAAGCGGCAGGTGCAAAACCAATTCACCGTGGT
GCTTAGCTGGGACGAAGTGAGGGCCCTACAGAAGCTCTATGGCGACCCAG
ACTCCGGAACCATCGACTTCTTGAAGTTCGCCGTCGCCCTTGGAAAGTCG
CCGGGCCACGGCCACGACAAGACCAGGCAGGCGTACAATTTCCTTCCGAA
GCATACGATGGAGAACGACCTCAAAGCTATCGAAAAGAAGATCGTCCATA
AGCTCGAGGATCGGTGTGAGACTCCGGAACCATCGACTTCTTGAAGTTCG
CCGTCGCCCTTGGAAAGTCGCCGGGCCACGGCCACGACAAGACCAGGCAG
GCGTACAATTTCCTTCCGAAGCATACGATGGAGAACGACCTCAAAGCTAT
CGAAAAGAAGATCGTCCATAAGCTCGAGGATCGGTGTGAGGTTGCAGGGA
ACTACCAGTATCAGTGGGCTCGACGCATGCTCTGTGACTCGATATCGACT
ATGGCGGGGGGGGTGGACAAGGCGCAGCTTAAACTGAGGCTTAGTGGTTT
GCTAGGGGTGGAGCTGAGCGATGGAGAAATGGAAGTTCTCTTCCGCAAAT
ACGCCGACCCGTGAGTTGCAGGGAACTACCAGTATCAGTGGGCTCGACGC
ATGCTCTGTGACTCGATATCGACTATGGCGGGGGGGGTGGACAAGGCGCA
GCTTAAACTGAGGCTTAGTGGTTTGCTAGGGGTGGAGCTGAGCGATGGAG
AAATGGAAGTTCTCTTCCGCAAATACGCCGACCCGTGA
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