mRNA_D-dudresnayi_contig10260.303.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: A0A7S3M3I6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3I6_9STRA) HSP 1 Score: 176 bits (447), Expect = 3.480e-51 Identity = 85/137 (62.04%), Postives = 95/137 (69.34%), Query Frame = 1 Query: 202 SETTIQAQLFIKNLKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGLQGAHHWNTVVDFRWHKTTHSPHWYEI 612 S + AQLFIK+ KNC I VPSLLGSVRIE+T IL+HQLRIH C DCKLYV+V SHPIIEDC +MGFAPY+Y+YD+L DIQ AGLQ A HWNTV DFRWHKTTHSP+WYEI Sbjct: 78 SAAEVHAQLFIKDNKNCKITVPSLLGSVRIEYTSDCEIHLGACCTSVYLESVKNCTIYILTHQLRIHTCSDCKLYVRVNSHPIIEDCTNMGFAPYAYQYDTLEADIQAAGLQTATHWNTVKDFRWHKTTHSPNWYEI 214
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: A0A2I0VTI8_9ASPA (Tubulin-folding cofactor C n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VTI8_9ASPA) HSP 1 Score: 89.7 bits (221), Expect = 2.080e-17 Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 226 LFIKNLKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGLQG-AHHWNTVVDFRWHKTTHSPHWYEIP 615 LFI L+NC I +LGS+ IE + SHQ+RIH+ ++C Y++V+S PIIEDC + FAPY Y+ + D+ +GL+ +W V DFRW + SP+W IP Sbjct: 233 LFIHRLRNCRIFTGPVLGSILIEDVNNCLF-------------------MLASHQIRIHQARECDFYLRVRSRPIIEDCSGLRFAPYRLLYEGIDKDLSDSGLEEETRNWANVDDFRWLRAVQSPNWCLIP 344
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: UPI000C1CEB20 (tubulin-folding cofactor C n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CEB20) HSP 1 Score: 87.0 bits (214), Expect = 2.020e-16 Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 1 Query: 226 LFIKNLKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGL-QGAHHWNTVVDFRWHKTTHSPHWYEIP 615 LF+ L NC I V +++GSV IE + SHQ+RIH K+C Y++V+S PIIEDC + FAPY Y+ + D++ A L + +W V DFRW + SP+W +P Sbjct: 245 LFMDRLTNCRIYVGAVMGSVLIEGVEGCVFI-------------------LASHQIRIHNAKNCDFYLRVRSRPIIEDCNGVRFAPYCLNYERIEKDLEEANLGEETANWANVDDFRWLRAVQSPNWSILP 356
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: A0A2G9IAJ5_9LAMI (Beta-tubulin folding cofactor C n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9IAJ5_9LAMI) HSP 1 Score: 86.3 bits (212), Expect = 3.340e-16 Identity = 46/131 (35.11%), Postives = 66/131 (50.38%), Query Frame = 1 Query: 226 LFIKNLKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGL-QGAHHWNTVVDFRWHKTTHSPHWYEIP 615 LF+ L NC + V +++GSV IE + SHQ+RIH KDC Y++V+S PIIED + FAPY Y+ + D++ A L + +W V DFRW + SP+W +P Sbjct: 229 LFMDKLTNCKVYVGAVMGSVLIEGVEGCVFV-------------------LASHQIRIHNAKDCDFYLRVRSRPIIEDSTGVRFAPYCLSYEGIEEDLKEANLGEETGNWENVDDFRWLRAVQSPNWSILP 340
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: A0A7I8KWH4_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KWH4_SPIIN) HSP 1 Score: 86.3 bits (212), Expect = 4.000e-16 Identity = 48/131 (36.64%), Postives = 68/131 (51.91%), Query Frame = 1 Query: 226 LFIKNLKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGL-QGAHHWNTVVDFRWHKTTHSPHWYEIP 615 LFI LKNCH+ V +LGSV IE + SHQ+RIH+ + Y++V+S PIIED S+ FAPY Y+ L +++ +GL + +W V DFRW + SP+W +P Sbjct: 246 LFIHRLKNCHVFVGPVLGSVLIEEVEGCVF-------------------MLASHQIRIHQARATDFYLRVRSRPIIEDSSSVRFAPYMLTYEGLEGELKDSGLAEETGNWANVDDFRWLRAIQSPNWCVLP 357
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: T0QBN1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QBN1_SAPDV) HSP 1 Score: 84.3 bits (207), Expect = 2.480e-15 Identity = 39/123 (31.71%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 241 LKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGL-QGAHHWNTVVDFRWHKTTHSPHWY 606 L+NCH+ + GS+ +E + QLR+H C + + Y+++ SHPIIEDC +GFAPY+ ++D L ++ +G+ + + + V DF+WH+ SPHWY Sbjct: 290 LRNCHVLTGPIAGSLWLEDCTESSFT-------------------VACRQLRVHHCHNARFYLRISSHPIIEDCSKLGFAPYTLQFDGLGAQLEASGMDRPSPLYAQVHDFKWHRAQQSPHWY 393
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: A0A3L6USA1_9STRA (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6USA1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 9.300e-15 Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = 1 Query: 376 ILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGLQ-GAHHWNTVVDFRWHKTTHSPHWYEIP 615 ++ QLR+H Y++++SHPI+EDC +GFAPY Y+ L + AGL W+ V DF+W + T SPHW +P Sbjct: 36 VVCRQLRVHHTSASAFYLRIKSHPIVEDCDGLGFAPYGLAYEGLGAQLDAAGLACDTALWSQVDDFKWLRQTQSPHWRVLP 116
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: A0A4D9B4V5_SALSN (C-CAP/cofactor C-like domain-containing protein n=4 Tax=Salvia TaxID=21880 RepID=A0A4D9B4V5_SALSN) HSP 1 Score: 82.0 bits (201), Expect = 1.040e-14 Identity = 45/131 (34.35%), Postives = 65/131 (49.62%), Query Frame = 1 Query: 226 LFIKNLKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGL-QGAHHWNTVVDFRWHKTTHSPHWYEIP 615 LF+ N+ NC + V +++GSV IE + SHQ+RIH K+C Y++V+S PIIED + FAPY Y + D+ A L + +W V DFRW + SP+W +P Sbjct: 224 LFVDNVVNCKVYVGAVMGSVLIEGAEGCVFV-------------------LASHQIRIHNAKNCSFYLRVRSRPIIEDSNGVRFAPYCLSYRGIEEDLAEANLDEETGNWANVDDFRWLRALQSPNWSVLP 335
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: S8D4V0_9LAMI (C-CAP/cofactor C-like domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8D4V0_9LAMI) HSP 1 Score: 81.3 bits (199), Expect = 1.750e-14 Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = 1 Query: 226 LFIKNLKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGL-QGAHHWNTVVDFRWHKTTHSPHWYEIP 615 LFI L NC + V ++GSV I+ I SHQ+RIH ++C Y++++S PIIEDC + F+PY Y L + A L + + +W V DFRW K SP+W +P Sbjct: 211 LFIDQLMNCKVYVGVVMGSVLIDGAEDCIFI-------------------IASHQIRIHNARNCDFYLRLRSRPIIEDCRGVRFSPYRLSYQGLEKQLMEADLSEESGNWENVDDFRWLKGVRSPNWSVLP 322
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Match: A0A2Z7BPU3_9LAMI (Tubulin-folding cofactor C-like n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BPU3_9LAMI) HSP 1 Score: 80.9 bits (198), Expect = 3.020e-14 Identity = 45/131 (34.35%), Postives = 66/131 (50.38%), Query Frame = 1 Query: 226 LFIKNLKNCHIEVPSLLGSVRIEHTXXXXXXXXXXXXXXXXXXXXXXXXQILSHQLRIHECKDCKLYVQVQSHPIIEDCVSMGFAPYSYKYDSLATDIQTAGL-QGAHHWNTVVDFRWHKTTHSPHWYEIP 615 LF+ L NC + V + GSV IE + SHQ+RIH+ K+C Y++V+S PIIED + FAPY +Y+ + D++ A L + +W V DFRW + SP+W +P Sbjct: 233 LFVDKLINCKVYVGPVTGSVLIEGVEGCVLV-------------------LASHQIRIHDAKNCDFYLRVRSRPIIEDSHGVRFAPYCLEYEGIEADLKEANLGEETGNWMEVDDFRWLRAVPSPNWSILP 344 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10260.303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10260.303.1 >prot_D-dudresnayi_contig10260.303.1 ID=prot_D-dudresnayi_contig10260.303.1|Name=mRNA_D-dudresnayi_contig10260.303.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=228bp TAGTTTTVAENVTSSSNTDNNAAACLLPPGAFVLSNLSEENMLITTTMLHback to top mRNA from alignment at D-dudresnayi_contig10260:3448..4410+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10260.303.1 ID=mRNA_D-dudresnayi_contig10260.303.1|Name=mRNA_D-dudresnayi_contig10260.303.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=963bp|location=Sequence derived from alignment at D-dudresnayi_contig10260:3448..4410+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10260:3448..4410+ >mRNA_D-dudresnayi_contig10260.303.1 ID=mRNA_D-dudresnayi_contig10260.303.1|Name=mRNA_D-dudresnayi_contig10260.303.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at D-dudresnayi_contig10260:3448..4410+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |