mRNA_D-dudresnayi_contig10244.289.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10244.289.1
Unique NamemRNA_D-dudresnayi_contig10244.289.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: A0A1V9Z5Q5_9STRA (BolA-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5Q5_9STRA)

HSP 1 Score: 143 bits (361), Expect = 9.870e-42
Identity = 66/101 (65.35%), Postives = 82/101 (81.19%), Query Frame = 1 
Query:   61 PIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGGDK 363
            PI S+I+TKL +A  PT+ +V+NESY HNVPKGSE+HF VI+VSD+F+GKPLIQRHRMVN +L +EL   +HALSIQ+KTPAQW  NST+  +P C GG K
Sbjct:   23 PIFSAIQTKLASAFVPTHLEVLNESYMHNVPKGSETHFKVIVVSDLFEGKPLIQRHRMVNAVLEEELNGGVHALSIQSKTPAQWEANSTVRPSPTCQGGMK 123
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: UPI001AAD74AC (bolA-like protein 1 n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD74AC)

HSP 1 Score: 143 bits (361), Expect = 1.560e-41
Identity = 64/108 (59.26%), Postives = 84/108 (77.78%), Query Frame = 1 
Query:   40 SESILTKPIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGGDK 363
            S++ + KP+E+SIR+KL  +L P + +V NESY H VP GSE+HF V++VS+ F GKPLIQRHR+VN +L +EL  S+HALSIQAKTP QW EN T+ K+P C+GG K
Sbjct:   26 SQNTMEKPVETSIRSKLTQSLAPCHLEVHNESYMHAVPPGSETHFKVVVVSEAFSGKPLIQRHRLVNDVLKEELAGSVHALSIQAKTPEQWEENPTVTKSPGCMGGSK 133
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: UPI00083C09FC (bolA-like protein DDB_G0274169 n=1 Tax=Eufriesea mexicana TaxID=516756 RepID=UPI00083C09FC)

HSP 1 Score: 142 bits (358), Expect = 3.000e-41
Identity = 70/118 (59.32%), Postives = 86/118 (72.88%), Query Frame = 1 
Query:    4 SLRLFTITTRTMSESILTKPIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGG 357
            S R  +I  R M   I   PIE+SIRTKL   LNP+Y +VINESY HNVPKGSE+HF VI+VSD+F  KPLI+RHRMVN++L  EL+  +HALSI AKTP QWN+ + +  +P C GG
Sbjct:   11 SYRSTSILPRNMCSIIQNNPIETSIRTKLTDFLNPSYIEVINESYMHNVPKGSETHFKVIVVSDMFKDKPLIKRHRMVNELLQAELEGGVHALSILAKTPDQWNDKNNVTPSPVCRGG 128
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: H3AJZ9_LATCH (Uncharacterized protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AJZ9_LATCH)

HSP 1 Score: 141 bits (355), Expect = 1.310e-40
Identity = 63/106 (59.43%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:   46 SILTKPIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGGDK 363
            S + KP+E+SIR KL   L+PT+ +V+NESY H VPKGSE+HF V++V++ F G PLIQRHR+VN++L +EL  ++HALSIQAKTP QW EN +I+K+P C+GG K
Sbjct:   25 STMEKPVEASIRAKLTQHLDPTHLEVLNESYMHAVPKGSETHFKVLVVTEKFKGLPLIQRHRLVNEVLKEELAGTVHALSIQAKTPQQWEENPSISKSPPCMGGSK 130
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: UPI001479520C (bolA-like protein DDB_G0274169 isoform X3 n=2 Tax=Osmia TaxID=124287 RepID=UPI001479520C)

HSP 1 Score: 140 bits (353), Expect = 1.670e-40
Identity = 63/104 (60.58%), Postives = 83/104 (79.81%), Query Frame = 1 
Query:   46 SILTKPIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGG 357
            S++T PIE+SIR KL  +LNP+Y ++INESY HNVPKGSE+HF VI+VSD F  KPL++RH+M+N +L  EL+N +HALSI AKTP+QW +NS +  +P C GG
Sbjct:   24 SVVTNPIENSIRKKLMGSLNPSYIEIINESYMHNVPKGSETHFKVIVVSDKFTDKPLLKRHQMINNLLQVELENGVHALSIVAKTPSQWEDNSNVAPSPACRGG 127
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: A0A812ZJC8_SYMMI (BOLA1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812ZJC8_SYMMI)

HSP 1 Score: 139 bits (351), Expect = 2.900e-40
Identity = 67/98 (68.37%), Postives = 79/98 (80.61%), Query Frame = 1 
Query:   64 IESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGG 357
            I  SIRTKL++ LNP + DVINESYKHNVPKGSESHF VI+VS+ F+G PLI+RHR VN +L DEL   +HALSI AKTP QW EN T++ +PNCLGG
Sbjct:    7 IARSIRTKLSS-LNPVFLDVINESYKHNVPKGSESHFKVIVVSEEFEGLPLIKRHRTVNHMLADELAMGVHALSIVAKTPTQWEENMTVSPSPNCLGG 103
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: A0A2D4BZF7_PYTIN (BolA-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZF7_PYTIN)

HSP 1 Score: 139 bits (351), Expect = 3.480e-40
Identity = 63/110 (57.27%), Postives = 83/110 (75.45%), Query Frame = 1 
Query:   37 MSESILTKPIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGGDKK 366
            MS S    PI   IR KL  A  P + DV+NESY HNVPKG+E+HF V++V++ FDGKPL+QRHRMVN +L +EL + +HALSIQ+KTPAQW ++ST+  +P+C+GG  K
Sbjct:    1 MSSSTTDGPIAQRIRAKLADAFAPLHLDVLNESYMHNVPKGAETHFKVVVVAEAFDGKPLLQRHRMVNDVLAEELASGVHALSIQSKTPAQWAKSSTVQASPSCMGGMTK 110
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: F0W4P3_9STRA (BolAlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4P3_9STRA)

HSP 1 Score: 138 bits (348), Expect = 5.240e-40
Identity = 62/102 (60.78%), Postives = 79/102 (77.45%), Query Frame = 1 
Query:   61 PIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGGDKK 366
            P+   IR KL AALNP + DVINESY HNVPKG+ESHF VI+V++VF+GK L+QRHRM+N+ L +EL   +HALSI++KTP QW +N  +  +PNCLGG  K
Sbjct:    5 PVAKQIRAKLEAALNPQHLDVINESYMHNVPKGTESHFKVIVVAEVFEGKSLLQRHRMLNEALKEELVELVHALSIESKTPRQWEQNCNVRPSPNCLGGMAK 106
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: UPI001478322B (bolA-like protein DDB_G0274169 isoform X1 n=2 Tax=Osmia lignaria TaxID=473952 RepID=UPI001478322B)

HSP 1 Score: 140 bits (353), Expect = 5.270e-40
Identity = 63/104 (60.58%), Postives = 83/104 (79.81%), Query Frame = 1 
Query:   46 SILTKPIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINKTPNCLGG 357
            S++T PIE+SIR KL  +LNP+Y ++INESY HNVPKGSE+HF VI+VSD F  KPL++RH+M+N +L  EL+N +HALSI AKTP+QW +NS +  +P C GG
Sbjct:   62 SVVTNPIENSIRKKLMGSLNPSYIEIINESYMHNVPKGSETHFKVIVVSDKFTDKPLLKRHQMINNLLQVELENGVHALSIVAKTPSQWEDNSNVAPSPACRGG 165
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BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Match: A0A067CIG7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CIG7_SAPPC)

HSP 1 Score: 139 bits (349), Expect = 6.390e-40
Identity = 66/102 (64.71%), Postives = 81/102 (79.41%), Query Frame = 1 
Query:   61 PIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVIIVSDVFDGKPLIQRHRMVNQILGDEL-KNSIHALSIQAKTPAQWNENSTINKTPNCLGGDK 363
            PI S+I+TKL AA  PT+  V+NESY HNVPKGSE+HF VI+VSD F+GKPL+QRHRMVN +L DEL K  +HALSIQ+KTP+QW  N+T+  +P C GG K
Sbjct:   21 PIFSAIQTKLAAAFAPTHLQVLNESYMHNVPKGSETHFKVIVVSDHFEGKPLLQRHRMVNAVLDDELTKGGVHALSIQSKTPSQWEANNTVRPSPTCQGGMK 122
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10244.289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V9Z5Q5_9STRA9.870e-4265.35BolA-like protein n=1 Tax=Achlya hypogyna TaxID=12... [more]
UPI001AAD74AC1.560e-4159.26bolA-like protein 1 n=1 Tax=Rana temporaria TaxID=... [more]
UPI00083C09FC3.000e-4159.32bolA-like protein DDB_G0274169 n=1 Tax=Eufriesea m... [more]
H3AJZ9_LATCH1.310e-4059.43Uncharacterized protein n=1 Tax=Latimeria chalumna... [more]
UPI001479520C1.670e-4060.58bolA-like protein DDB_G0274169 isoform X3 n=2 Tax=... [more]
A0A812ZJC8_SYMMI2.900e-4068.37BOLA1 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A2D4BZF7_PYTIN3.480e-4057.27BolA-like protein n=1 Tax=Pythium insidiosum TaxID... [more]
F0W4P3_9STRA5.240e-4060.78BolAlike protein putative n=1 Tax=Albugo laibachii... [more]
UPI001478322B5.270e-4060.58bolA-like protein DDB_G0274169 isoform X1 n=2 Tax=... [more]
A0A067CIG7_SAPPC6.390e-4064.71Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10244contigD-dudresnayi_contig10244:9566..9956 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score143.7
Seed ortholog evalue5.3e-32
Seed eggNOG ortholog157072.XP_008865784.1
Preferred namebola1
KEGG koko:K02426,ko:K19307,ko:K22066
GOsGO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006790,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0030234,GO:0031163,GO:0031974,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050790,GO:0051186,GO:0051604,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0097428,GO:0098772,GO:0106035,GO:1901564
EggNOG free text desc.protein maturation by iron-sulfur cluster transfer
EggNOG OGsCOG0271@1,KOG2313@2759
EC2.1.1.313
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03029
Hectar predicted targeting categoryother localisation
Exons1
Model size391
Cds size336
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10244.289.1prot_D-dudresnayi_contig10244.289.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10244 9602..9937 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927525.353117-UTR-D-dudresnayi_contig10244:9565..96011622927525.353117-UTR-D-dudresnayi_contig10244:9565..9601Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10244 9566..9601 +
1690556792.2889676-UTR-D-dudresnayi_contig10244:9565..96011690556792.2889676-UTR-D-dudresnayi_contig10244:9565..9601Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10244 9566..9601 +
1622927525.38986-UTR-D-dudresnayi_contig10244:9937..99561622927525.38986-UTR-D-dudresnayi_contig10244:9937..9956Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10244 9938..9956 +
1690556792.308816-UTR-D-dudresnayi_contig10244:9937..99561690556792.308816-UTR-D-dudresnayi_contig10244:9937..9956Desmarestia dudresnayi DdudBR16 monoicousUTRD-dudresnayi_contig10244 9938..9956 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927525.3745563-CDS-D-dudresnayi_contig10244:9601..99371622927525.3745563-CDS-D-dudresnayi_contig10244:9601..9937Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10244 9602..9937 +
1690556792.29993-CDS-D-dudresnayi_contig10244:9601..99371690556792.29993-CDS-D-dudresnayi_contig10244:9601..9937Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10244 9602..9937 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10244.289.1

>prot_D-dudresnayi_contig10244.289.1 ID=prot_D-dudresnayi_contig10244.289.1|Name=mRNA_D-dudresnayi_contig10244.289.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=112bp
MSESILTKPIESSIRTKLNAALNPTYFDVINESYKHNVPKGSESHFNVII
VSDVFDGKPLIQRHRMVNQILGDELKNSIHALSIQAKTPAQWNENSTINK
TPNCLGGDKKL*
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mRNA from alignment at D-dudresnayi_contig10244:9566..9956+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10244.289.1 ID=mRNA_D-dudresnayi_contig10244.289.1|Name=mRNA_D-dudresnayi_contig10244.289.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=391bp|location=Sequence derived from alignment at D-dudresnayi_contig10244:9566..9956+ (Desmarestia dudresnayi DdudBR16 monoicous)
CGATCATTGCGTTTATTTACTATAACAACACGTACTATGAGTGAATCTAT
TCTAACAAAGCCAATTGAATCTAGTATTCGTACCAAATTAAATGCAGCAT
TAAATCCTACATATTTTGATGTGATCAATGAAAGTTACAAACACAATGTT
CCTAAAGGTTCAGAATCTCATTTTAATGTTATTATTGTTTCTGATGTATT
TGATGGAAAACCATTAATACAAAGACATCGTATGGTGAATCAGATTCTTG
GAGATGAATTAAAGAATTCGATTCATGCTTTATCAATACAAGCCAAAACA
CCTGCACAATGGAATGAAAATTCTACTATTAATAAAACACCAAATTGTTT
AGGTGGTGATAAGAAATTGTAATATCTTGACATTAATATGA
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10244:9566..9956+

>mRNA_D-dudresnayi_contig10244.289.1 ID=mRNA_D-dudresnayi_contig10244.289.1|Name=mRNA_D-dudresnayi_contig10244.289.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at D-dudresnayi_contig10244:9566..9956+ (Desmarestia dudresnayi DdudBR16 monoicous)
ATGAGTGAATCTATTCTAACAAAGCCAATTGAATCTAGTATTCGTACCAA
ATTAAATGCAGCATTAAATCCTACATATTTTGATGTGATCAATGAAAGTT
ACAAACACAATGTTCCTAAAGGTTCAGAATCTCATTTTAATGTTATTATT
GTTTCTGATGTATTTGATGGAAAACCATTAATACAAAGACATCGTATGGT
GAATCAGATTCTTGGAGATGAATTAAAGAATTCGATTCATGCTTTATCAA
TACAAGCCAAAACACCTGCACAATGGAATGAAAATTCTACTATTAATAAA
ACACCAAATTGTTTAGGTGGTGATAAGAAATTGTAAATGAGTGAATCTAT
TCTAACAAAGCCAATTGAATCTAGTATTCGTACCAAATTAAATGCAGCAT
TAAATCCTACATATTTTGATGTGATCAATGAAAGTTACAAACACAATGTT
CCTAAAGGTTCAGAATCTCATTTTAATGTTATTATTGTTTCTGATGTATT
TGATGGAAAACCATTAATACAAAGACATCGTATGGTGAATCAGATTCTTG
GAGATGAATTAAAGAATTCGATTCATGCTTTATCAATACAAGCCAAAACA
CCTGCACAATGGAATGAAAATTCTACTATTAATAAAACACCAAATTGTTT
AGGTGGTGATAAGAAATTGTAA
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