mRNA_D-dudresnayi_contig10147.201.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: D7G0M6_ECTSI (Nucleoporin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M6_ECTSI) HSP 1 Score: 132 bits (332), Expect = 6.100e-34 Identity = 73/90 (81.11%), Postives = 76/90 (84.44%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQVRRTNFRASTDGVSMLKITAHPNGRVFMAGK 270 QVIVTVALVPPK+GVF + V+HVLAVATTVEVILLAVTY K GS RNRRIQVRRTNFRASTDGVSMLKI AHPNGRVFMAGK Sbjct: 125 QVIVTVALVPPKKGVFNKEVEHVLAVATTVEVILLAVTYHEKPQE----TGSPRNRRIQVRRTNFRASTDGVSMLKIAAHPNGRVFMAGK 210
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: A0A7R9YE90_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE90_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.950e-15 Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQVRRTNFRASTDGVSMLKITAHPNGRVFMAG 267 Q+IV+VALVPP+ GVF+E VK++LAVAT VE++LLAV +E + G N + +R T+F S+D V+M+K+ +GR+FM G Sbjct: 89 QIIVSVALVPPRPGVFREKVKYLLAVATAVEIVLLAVAFEEPEGTGVLGQPLGLNGTMTLRPTSFSVSSDNVTMMKLCGTNSGRIFMGG 177
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: A0A835YRU3_9STRA (Nup133 N terminal like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU3_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.370e-14 Identity = 47/90 (52.22%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQVRRTNFRASTDGVSMLKITAHPNGRVFMAGK 270 QVIV V L P++GVF+ VK++L VAT VEV+L+AVT G DG R+ VR T F AS+DGV+M I HP GR+FMAGK Sbjct: 130 QVIVAVGLAVPRQGVFKPLVKYLLVVATPVEVVLVAVTDGG--------DG-----RLDVRPTQFSASSDGVNMNAIRGHPCGRIFMAGK 206
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: A0A2V3ITS1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITS1_9FLOR) HSP 1 Score: 70.1 bits (170), Expect = 4.740e-12 Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQVRRTNFRASTDGVSMLKITAHPNGRVFMAG 267 Q+IV+VALVPP+ VF ESV++++ VATTVEV LL VT+ A+G + + T+ TD + MLKI A P GR+FMAG Sbjct: 117 QIIVSVALVPPRPSVFVESVQYLVVVATTVEVTLLGVTFS---ASGE----------LSLLPTHISIPTDNIMMLKIVATPEGRIFMAG 192
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: A0A2G5BCU2_COERN (Nucleoporin-domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCU2_COERN) HSP 1 Score: 69.3 bits (168), Expect = 8.820e-12 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQVRRTNFRASTDGVSMLKITAHPNGRVFMAG 267 Q+IV+VA+V PK GVF +S+KHVL VAT +EV LL V+Y + G DG + + T DGV+M + +GRVFM+G Sbjct: 115 QIIVSVAMVKPKPGVFVDSIKHVLVVATPLEVFLLGVSYNIGRLGGARGDGGE----VTLYATQISVPADGVAMTSVVGTADGRVFMSG 199
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: A0A437AZ50_CHISP (Uncharacterized protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A437AZ50_CHISP) HSP 1 Score: 68.9 bits (167), Expect = 1.210e-11 Identity = 40/91 (43.96%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQ-VRRTNFRASTDGVSMLKITAHPNGRVFMAGK 270 + IV+V LV PK GVFQ VK++L + TTVE+++L VT+ + DGSS + I V F TDG+SM+ + + NGR+FM GK Sbjct: 124 ETIVSVGLVKPKAGVFQSFVKYLLVLTTTVEIVVLGVTFSSSKT-----DGSSELQEILLVPEPVFVLPTDGISMMSVKSTANGRIFMGGK 209
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: S4P1V5_9NEOP (Nucleoporin 154 (Fragment) n=1 Tax=Pararge aegeria TaxID=116150 RepID=S4P1V5_9NEOP) HSP 1 Score: 67.4 bits (163), Expect = 1.570e-11 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQ-VRRTNFRASTDGVSMLKITAHPNGRVFMAGK 270 + IV+V LV PK GVFQ VK++L + TTVE+++L VT+ + N +DGS+ I V F TDGVSML + + GR+FM GK Sbjct: 37 ETIVSVGLVKPKSGVFQSFVKYLLVLTTTVEIVVLGVTF-----SSNKQDGSTEFEEIHLVPEPVFVLPTDGVSMLCVKSTSKGRIFMGGK 122
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: UPI001C363799 (Uncharacterized protein n=2 Tax=Manduca sexta TaxID=7130 RepID=UPI001C363799) HSP 1 Score: 68.2 bits (165), Expect = 2.250e-11 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQVRRTNFRASTDGVSMLKITAHPNGRVFMAGK 270 + IV+V LV PK GVFQ VK++L + TTVE+++L VT+ A+ ND G + + V F TDGVSM+ +TA GR+FM GK Sbjct: 143 ETIVSVGLVKPKAGVFQSFVKYLLVLTTTVEIVVLGVTFS---ASKNDMSGEFQEIHL-VPEPVFVLPTDGVSMMCVTATAKGRIFMGGK 228
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: UPI00188E5FD2 (LOW QUALITY PROTEIN: nuclear pore complex protein Nup154-like n=2 Tax=Manduca sexta TaxID=7130 RepID=UPI00188E5FD2) HSP 1 Score: 68.2 bits (165), Expect = 2.250e-11 Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQVRRTNFRASTDGVSMLKITAHPNGRVFMAGK 270 + IV+V LV PK GVFQ VK++L + TTVE+++L VT+ A+ ND G + + V F TDGVSM+ +TA GR+FM GK Sbjct: 144 ETIVSVGLVKPKAGVFQSFVKYLLVLTTTVEIVVLGVTFS---ASKNDMSGEFQEIHL-VPEPVFVLPTDGVSMMCVTATAKGRIFMGGK 229
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Match: A0A821MTB3_9NEOP (Hypothetical protein n=4 Tax=Pieris TaxID=7115 RepID=A0A821MTB3_9NEOP) HSP 1 Score: 67.0 bits (162), Expect = 5.740e-11 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 1 QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDGSSRNRRIQ-VRRTNFRASTDGVSMLKITAHPNGRVFMAGK 270 + IV+V LV PK GVFQ VK++L + TTVE+++L VT+ + N +DGSS I V F TDG+SML + + GR+FM GK Sbjct: 142 ETIVSVGLVKPKPGVFQSFVKYLLVLTTTVEIVVLGVTF-----SSNKQDGSSEFEEIHLVPEPVFVLPTDGISMLCVKSTCRGRIFMGGK 227 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10147.201.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10147.201.1 >prot_D-dudresnayi_contig10147.201.1 ID=prot_D-dudresnayi_contig10147.201.1|Name=mRNA_D-dudresnayi_contig10147.201.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=90bp QVIVTVALVPPKRGVFQESVKHVLAVATTVEVILLAVTYEGKQANGNDRDback to top mRNA from alignment at D-dudresnayi_contig10147:9508..10808- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10147.201.1 ID=mRNA_D-dudresnayi_contig10147.201.1|Name=mRNA_D-dudresnayi_contig10147.201.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1301bp|location=Sequence derived from alignment at D-dudresnayi_contig10147:9508..10808- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10147:9508..10808- >mRNA_D-dudresnayi_contig10147.201.1 ID=mRNA_D-dudresnayi_contig10147.201.1|Name=mRNA_D-dudresnayi_contig10147.201.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at D-dudresnayi_contig10147:9508..10808- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |