mRNA_D-dudresnayi_contig10004.42.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: D7FNR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR3_ECTSI) HSP 1 Score: 276 bits (705), Expect = 1.540e-84 Identity = 155/308 (50.32%), Postives = 182/308 (59.09%), Query Frame = 3 Query: 3 GVDANGAMLADARPADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHN------------------NKDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELCGVEHHRSICKEAFKAFETPDENNAGRRPRSSGLDGPRHTTGNMTAHTDEATEKEVL--------PYGQAWFETTMSYLRCLDGAG--VAGVHVMAPGPGPRRRTKSLIDAGIFGPRR 842 GVDA GA + + RPADALLL+SGSHPGR LP LPDVYDELRLAT MR+SG LP+GLA WAVANPL EA + GVDR+R+KV+LGAEVILTQPPLAW+ FERWL+GVH SGAL N S + + H A E + A +L+G+PVITSPKGLRFWL+LCG+ +CK+ F+AF P A TG+ H A EK+ PYGQ W ETTM L+ LDG+G VAGVH+MAPG PRRR L G FG R Sbjct: 163 GVDAEGAKVRNVRPADALLLVSGSHPGRRLPFAKSFLPDVYDELRLATSMRNSGRLPKGLALWAVANPLAEADEAGVDRVRKKVELGAEVILTQPPLAWELFERWLQGVHASGALGRSAAARNAGLTKPGEGTDATVKIFETSGSTGEERSTRHPLAAAEGRRGGDPAARILVGLPVITSPKGLRFWLDLCGLHDKPGVCKQVFEAFGQPSSVVA--------------RTGSEEPHAHPAGEKQATAVAGSPPSPYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIELAATGFFGKPR 456
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A6H5L748_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L748_9PHAE) HSP 1 Score: 275 bits (702), Expect = 4.060e-84 Identity = 155/308 (50.32%), Postives = 183/308 (59.42%), Query Frame = 3 Query: 3 GVDANGAMLADARPADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNN------------------KDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELCGVEHHRSICKEAFKAFETPDENNAGRRPRSSGLDGPRHTTGNMTAHTDEATEKEVL--------PYGQAWFETTMSYLRCLDGAG--VAGVHVMAPGPGPRRRTKSLIDAGIFGPRR 842 GVDA GA + + RPADALLL+SGSHPGR LP L DVYDELRLAT MR+SG LP+GLA WAVANPLTE + G+DR+R+KV+LGAEVILTQPPLAW+ FERWL+GVH SGAL G N+ S + + A E Q A +L+G+PVIT+PKGLRFWL LCG+ + +CK+AF+AF P A TG H A EK+ PYGQ W ETTM L+ LDG+G VAGVH+MAPG PRRR L AG FG R Sbjct: 161 GVDAEGAKVPNVRPADALLLVSGSHPGRRLPFAKSFLMDVYDELRLATSMRNSGHLPKGLALWAVANPLTEVDEAGIDRVRKKVELGAEVILTQPPLAWELFERWLQGVHTSGALGGSAAARNDGLAKPGEGTDATMKMFEASGSTGEERSTRRPTAAAEGQRGGDSTARILVGLPVITAPKGLRFWLNLCGLHDNPGVCKQAFEAFGHPSSVVA--------------RTGTEEPHGHPAGEKQASAVAGSTPSPYGQEWLETTMLKLKSLDGSGLGVAGVHLMAPGRAPRRRAIQLAAAGFFGEPR 454
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A8J9WJA9_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WJA9_9CHLO) HSP 1 Score: 115 bits (288), Expect = 5.600e-25 Identity = 70/173 (40.46%), Postives = 86/173 (49.71%), Query Frame = 3 Query: 3 GVDANGAMLADARPADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNNKDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELC 521 G++ +G A RPADALLL+SGSHP R + L D L LA +RD GLLP + WAVANPL + D L RKV GAEVILTQPPL + FE W GV G A A ++IG+P++TS + + FWLELC Sbjct: 133 GLEEDGRSAAGVRPADALLLVSGSHPLRRALAWSGVLQDSVSALHLAHSLRDQGLLPPQTSLWAVANPLVDTPDT----LERKVAAGAEVILTQPPLIYSKFESWFDGVDRLGV---------------------------------ASKAKIVIGIPMLTSSRSMLFWLELC 268
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A2K3CVC3_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CVC3_CHLRE) HSP 1 Score: 110 bits (275), Expect = 1.140e-22 Identity = 85/277 (30.69%), Postives = 119/277 (42.96%), Query Frame = 3 Query: 15 NGAMLADARPADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNNKDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELCGVEHH---RSICKEAFKAFETPDENNAGRRPRSSGLDGPRHTTGNMTAHTDEATEKEVLPYGQAWFETTMSYLRCLDGAGVAGVHVMAPGPGPRRRTKSLIDAGIFGP 836 +GA A + A+ LL +SGSHP R LP L D LR+A R+R G +P W VANP TE G L RK +LGA +LTQPPL W+ + WL G L +P N++ +T+ S + SAG L++G P+ +S L FW+ L G R + +A +A AG G + A+ + E +VL +G GVAG+HVM G + ++ G P Sbjct: 221 DGAEAAGGQRANVLLCVSGSHPVRTLPGVASLLRSSLDTLRIADRLRQRGYIPPCTQLWVVANPNTE---RGAGLLERKTELGANAVLTQPPLDWEAYLAWLEDARRRGLLNEQLPPGNSR-----STSLSSSGXXXXXXXXSAGPLRLIVGHPMASSAANLSFWVSLAGCGGSAAARQLVADALRA-------EAG---------GKEAAAAHAAAYNSKLVE-QVLAHG-----------------GVAGLHVMPIGKASKALALRMLAEGALPP 455
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A835WUH7_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WUH7_9CHLO) HSP 1 Score: 110 bits (274), Expect = 1.400e-22 Identity = 83/277 (29.96%), Postives = 114/277 (41.16%), Query Frame = 3 Query: 15 NGAMLADARPADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNNKDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELCGVEHH---RSICKEAFKAFETPDENNAGRRPRSSGLDGPRHTTGNMTAHTDEATEKEVLPYGQAWFETTMSYLRCLDGAGVAGVHVMAPGPGPRRRTKSLIDAGIFGP 836 +GA+ A + AD LL +SGSHP R LP L D LRLA R+R +G +P W VANP TE G L RK +LGA +LTQPPL W + WL G L +P + S S T + + G L++G P+ +S L FW+ L G R + +A +A G + TA + ++VL +G GVAG+HVM G + ++ G P Sbjct: 210 DGAVAAGGQRADVLLCVSGSHPVRTLPGVSSLLRSSLDTLRLADRLRQAGYIPPSTQLWVVANPNTE---RGAGLLERKSELGANAVLTQPPLDWNAYLAWLEDARSRGLLNEQLPMPGSSSSS------SSTGXXXXXGSSTGGPVRLIVGHPMASSAANLSFWVSLAGCGGSVAARQLVADAMRAEA-----------------GGKEAAAAHTASYNRKLVEQVLAHG-----------------GVAGLHVMPIGKASKGLALRMLADGSLPP 443
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A835YF65_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YF65_9CHLO) HSP 1 Score: 108 bits (269), Expect = 3.840e-22 Identity = 68/176 (38.64%), Postives = 88/176 (50.00%), Query Frame = 3 Query: 45 ADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNNKDSVHKATAPSHTPLADEQQ----------------NKSAGGATLLIGMPVITSPKGLRFWLELCG 524 A ALL +SGSHP R LP+ D LR+ATR+R +G +P WAVANP TE G L RKV+LGA+V+LTQPPL W+ + WL G L +P ++APS + A E + + GA LL+G P+ +S L FWL L G Sbjct: 159 ARALLCVSGSHPVRSLPLVPSLFRSSLDTLRIATRLRAAGAIPPDTQLWAVANPNTE---RGAGLLERKVELGAQVVLTQPPLDWEAYLAWLGDAERRGLLLPALP---------SSSAPSPSAPASEAAGADXXXXXXXXXXXTPSPTDAGARLLVGHPMASSAGNLSFWLALSG 322
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A061R353_9CHLO (Methylenetetrahydrofolate reductase (NAD(P)H) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R353_9CHLO) HSP 1 Score: 105 bits (261), Expect = 5.180e-22 Identity = 63/160 (39.38%), Postives = 80/160 (50.00%), Query Frame = 3 Query: 45 ADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNNKDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELCG 524 A+ALL +SGSHP R L I G LP D L +A M+ G LP L WAV NPL E + RLRRK++ GAEV++TQPPL W F+RW G L EQ L++G+P+++S L FWL+LCG Sbjct: 61 ANALLCVSGSHPVRQLSIMGRLLPSSLDTLAMAGEMKARGNLPGSLRLWAVENPLLEYDAQ---RLRRKIEAGAEVVVTQPPLDWDSFQRWADDADRLGLL--------------------------EQ-------CQLVVGLPMLSSAGNLAFWLQLCG 184
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A2P6VAW2_9CHLO (5,10-methylenetetrahydrofolate reductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAW2_9CHLO) HSP 1 Score: 105 bits (262), Expect = 2.660e-21 Identity = 65/177 (36.72%), Postives = 86/177 (48.59%), Query Frame = 3 Query: 3 GVDANGAMLADARPADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNNKDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELCGVEH 533 GVDA+G ADALL +SGSHP RHLP L +D L LA+ MR+ G LP L+ WAV NP+ V RL +K++ GAEVI+TQPPL W W AD+Q + + +++G+P++ S L FWL LCGV + Sbjct: 164 GVDASGDPKPGGSSADALLFVSGSHPARHLPGATKWLQSSFDLLLLASAMREEGYLPPSLSLWAVENPMLSP----VSRLDKKIENGAEVIITQPPLLWNRTALWFE-------------------------------QADKQ--RLSQNVKVVLGLPIVPSVGNLEFWLRLCGVRN 303
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A7J7Q9T3_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q9T3_9CHLO) HSP 1 Score: 104 bits (259), Expect = 5.010e-21 Identity = 67/182 (36.81%), Postives = 90/182 (49.45%), Query Frame = 3 Query: 3 GVDANGAMLA--DARP-ADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNNKDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELCGVEHHR 539 GV +G +A + RP ADALLL+SGSHP R LP+ LP LR A++++ G+LP+ LA WAVANP+ E ++ K+ GAEVILTQPPL W F W+ D QQ + A LL+G P+++S + FW LCG +R Sbjct: 45 GVTPSGMRMAVGEQRPHADALLLVSGSHPVRTLPLLQQFLPGSVAMLRQASQLKQCGVLPQQLALWAVANPVMEPDASYAEQ---KIAAGAEVILTQPPLDWAKFVAWME---------------------------------DAQQRQLHTAARLLVGFPLLSSAANMTFWAALCGAGGNR 190
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Match: A0A2V0PHH2_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHH2_9CHLO) HSP 1 Score: 102 bits (255), Expect = 3.910e-20 Identity = 60/161 (37.27%), Postives = 75/161 (46.58%), Query Frame = 3 Query: 42 PADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPEGLAFWAVANPLTEASDEGVDRLRRKVQLGAEVILTQPPLAWQPFERWLRGVHLSGALRGGMPGHNNKDSVHKATAPSHTPLADEQQNKSAGGATLLIGMPVITSPKGLRFWLELCG 524 PADALLL+SGSHP R +P LP LR AT +R +G +P + WAVANP+TE R KV+ GAE ILTQPPL W FERW AD ++ A +++G P ++S FWL L G Sbjct: 230 PADALLLVSGSHPARQVPGIASVLPGSISMLRTATGLRAAGAIPAATSLWAVANPVTERD---ASRTEAKVEAGAEAILTQPPLDWPAFERW---------------------------------WADAERRGLTRAAKIVVGFPALSSAANATFWLALAG 354 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10004.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10004.42.1 >prot_D-dudresnayi_contig10004.42.1 ID=prot_D-dudresnayi_contig10004.42.1|Name=mRNA_D-dudresnayi_contig10004.42.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=275bp MLADARPADALLLLSGSHPGRHLPIFGWSLPDVYDELRLATRMRDSGLLPback to top mRNA from alignment at D-dudresnayi_contig10004:7620..9594- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10004.42.1 ID=mRNA_D-dudresnayi_contig10004.42.1|Name=mRNA_D-dudresnayi_contig10004.42.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1975bp|location=Sequence derived from alignment at D-dudresnayi_contig10004:7620..9594- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10004:7620..9594- >mRNA_D-dudresnayi_contig10004.42.1 ID=mRNA_D-dudresnayi_contig10004.42.1|Name=mRNA_D-dudresnayi_contig10004.42.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at D-dudresnayi_contig10004:7620..9594- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |