mRNA_D-dudresnayi_contig10.28.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: A0A6H5K311_9PHAE (PSP1 C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K311_9PHAE) HSP 1 Score: 122 bits (305), Expect = 4.470e-28 Identity = 70/161 (43.48%), Postives = 97/161 (60.25%), Query Frame = 2 Query: 95 IYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVVEVLGMQTFMERRMNLPRSAAQQDQDDQ-NVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLD 574 +Y VQFKR R+F LA ++ V D+V VE DRGEDLG+VV + + E LP +A Q+ Q I+R AT E QM+ DK E+ +++ C LP+ V+DAE Q+DR KLT F++ RIDFR+ VR L++ YKTRIWM++L+ Sbjct: 62 VYHVQFKRSARNFLLAKTCQRDIQVGDYVKVEADRGEDLGMVVTIFPVP---EAGRPLPATAGQKRGFGQFEKEHIIRAATEDEVQMVKDKLRDEERVLEVCRTKVLQR-SLPMRVMDAEFQYDRHKLTFFFEAEGRIDFRELVRDLFSLYKTRIWMQQLE 218
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: B8BVJ8_THAPS (PSP1 C-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVJ8_THAPS) HSP 1 Score: 121 bits (303), Expect = 1.280e-27 Identity = 71/168 (42.26%), Postives = 100/168 (59.52%), Query Frame = 2 Query: 92 LIYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVVEVLGMQTFM----ERRMNLPRSAAQQDQDDQNVGC---ILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLD 574 L+Y V+FKR R+F L R +V + +V VE DRGEDLGIV ++ M+ ++ + N S DQ + G I+R+AT E +L K E +++ C A + GLP+ V+DAE QFDR KLT F++ RIDFR+ VR L++ YKTRIWM++LD Sbjct: 108 LVYNVKFKRSQRNFILGQRITRDVKLGCYVKVEADRGEDLGIVFSIVSMEKYLASNRSKSDNDTGSGEGPDQPAVSAGDLKRIMRVATNDEISLLEVKREDEDALLKICRTKA-HQRGLPMTVVDAEYQFDRNKLTFFFEADTRIDFRELVRDLFSIYKTRIWMQQLD 274
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: A0A448YV94_9STRA (PSP1 C-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV94_9STRA) HSP 1 Score: 124 bits (312), Expect = 8.070e-27 Identity = 73/175 (41.71%), Postives = 106/175 (60.57%), Query Frame = 2 Query: 95 IYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVV-----EVLGMQTFMERRMNLPRSAAQQDQDDQNVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLDQQQSEVQPFA 604 +Y V+FKR R+F + PR N ++ V +V VE DRGEDLGIV+ + +F ++P + A D + I+RLAT E Q+L K E+++++ C G+P+VV+DAE QFDR KLT F++ + RIDFR+ VR L++ YKTRIWM++LD+ S P A Sbjct: 593 VYNVKFKRTQRTFEIGPRLNRHLEVGTYVKVEADRGEDLGIVIGKAKNPLARSSSFGAGMGDIPTAGAGGGGD---LKKIIRLATHDEVQLLGMKRKEEEELLEVCRHKVIQR-GMPMVVVDAEYQFDRHKLTFFFEANTRIDFRELVRDLFSIYKTRIWMQQLDKSTSATCPTA 763
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: B5Y510_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y510_PHATC) HSP 1 Score: 124 bits (311), Expect = 1.130e-26 Identity = 77/201 (38.31%), Postives = 116/201 (57.71%), Query Frame = 2 Query: 68 MGMPHLQDLIYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVVEVLGMQTF-MERRMNL-----PRSAAQQDQDDQNVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLDQQQSEVQPFAAMALATGVQFSQGQGS 652 M MP ++Y V+FKR R+F L PR + ++ + +V VE DRGEDLGIVV ++ + + R + P ++ + ++ CI+RLAT E +L K E+++++ C GLP+ V+DAE QFDR KLT F++ R+DFR+ VR L++ YKTRIWM++LD+ S P AM + T F G+ Sbjct: 619 MAMP---KVVYNVKFKRSQRNFVLGPRISRDLKIGTYVKVEADRGEDLGIVVGMVPAERYSFSSRSSFSSGVGPAPSSIGSSNIADLKCIIRLATHDEVSLLTIKRDEEEELLKICRGKVRQR-GLPMHVVDAEYQFDRHKLTFFFEAEGRVDFRELVRDLFSMYKTRIWMQQLDKTTSTSSP--AMMVPTSQNFQMDFGT 813
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: A0A7S2RAB1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAB1_9STRA) HSP 1 Score: 119 bits (298), Expect = 5.080e-25 Identity = 70/171 (40.94%), Postives = 102/171 (59.65%), Query Frame = 2 Query: 95 IYQVQFKRGCRSFTLAPRANL--NVSVHDFVVVEGDRGEDLGIVVEVLGMQTFMERRMNL----PRSAAQQDQDDQNVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLDQQQSE 589 +YQV+FKR R+F L+ + +V+ VVVE DRGEDLG+VV + ++ F+E PR QD + V LRLAT +E+ L +K E+ +++ C LP+ V+DAE QFDR KLT F++ RIDFR+ VR L++ YKTRIW++++D S+ Sbjct: 496 VYQVKFKRNQRNFLLSGGNSCRGSVTTGSIVVVEADRGEDLGVVVSKMPLEQFVEESATTAGHKPRGFGSMFQDTKRV---LRLATEEEKVKLREKNEEEEQVLRVCRNKVKQR-SLPMYVIDAEYQFDRHKLTFFFEAERRIDFRELVRDLFSVYKTRIWLQQIDMNASQ 662
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: A0A836CPR8_9STRA (PSP1 C-terminal conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR8_9STRA) HSP 1 Score: 108 bits (271), Expect = 2.330e-24 Identity = 65/169 (38.46%), Postives = 97/169 (57.40%), Query Frame = 2 Query: 95 IYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVVEVLGMQ---------TFMERRMNLPRSAAQQDQDDQNVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLD 574 +Y VQFKRG R+F LA ++++ D+V VE DRGEDLG++V + + T R+ + Q +++ ILR A+ E +L +K E+ ++ C A LP+ V+DAE Q+DR KLT ++ RIDFR+ VR L+A YKTRIWM+++D Sbjct: 1 MYTVQFKRGARTFLLARACERSLTIGDYVKVEADRGEDLGVIVAIAPLPDAGVAPKPPTAGHRQRGGGGALGQCERER-----ILRGASDDEIALLKEKMSDEERVLLVCRAKALQR-NLPMEVIDAEFQYDRHKLTFYFQADGRIDFRELVRDLFALYKTRIWMQQVD 163
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: A0A418AIP1_9STRA (PSP1 C-terminal domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AIP1_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.570e-23 Identity = 62/161 (38.51%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 89 DLIYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVVEVLGMQTFMERRMNLPRSAAQQDQDDQNVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKL 571 D Y+VQFKR + F R +V D+V VEGDRGED+G V+ V+ ++++++L +A V I+RLA+ E +L + E++++ C LP+ V+DAE QFDR KLT +++ RIDFR+ VR L+A YKTRIW++++ Sbjct: 15 DTTYEVQFKRSRKDFFAGIRG---YNVGDYVKVEGDRGEDVGHVLGVVSFDHSIKKKVDLTHTAM-------GVKRIMRLASEAECDLLRQQHKEEQEVLHVCRTKVRQRM-LPMNVIDAEYQFDRHKLTFYFEADRRIDFRELVRDLFAIYKTRIWLQQV 164
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: A0A7S3DVM7_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DVM7_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.020e-23 Identity = 73/201 (36.32%), Postives = 109/201 (54.23%), Query Frame = 2 Query: 56 ASPAMGMPHLQDLIYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVVEVLGMQTF-----MERRMNLPRSAAQQDQDDQNVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLDQQQSEVQPFAAMALATGVQFSQG 643 A A+ +P ++Y V+FKR R+F L PR ++ + +V VE DRGEDLGIV+ + F + + ++ I+RLAT E +L K E+++++ C GLP+ V+DAE QFDR KLT F++ R+DFR+ VR L++ YKTRIWM++LD+ + P A MA +Q G Sbjct: 583 AGAALPLP---KVVYNVKFKRTQRNFVLGPRITRDLKIGTYVKVEADRGEDLGIVIGKVPADKFNFASRTQYTAGMGPPGGMGGSSAADLKRIIRLATHDEVSLLGVKRDEEEELLKICRGKVRQR-GLPMNVVDAEYQFDRHKLTFFFEAEGRVDFRELVRDLFSMYKTRIWMQQLDKNTATSSP-AIMAPQQHLQMDYG 778
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: A0A7S2K1T8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1T8_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.050e-23 Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 89 DLIYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVVEVLGMQTFMERRMNLPRSAAQQDQDDQNVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLDQQQSEVQP 598 D IY V+FKR RSF LA +V V +V VE DRGEDLG+V+ A ++ ILRLA++ E L +K E +++ C + LP+++LDAE QFDR KLT F++ R+DFR+ VR L++ YKTRIWM+ LD ++++ P Sbjct: 182 DWIYVVKFKRTQRSFILARGFIGDVKVGHYVKVEADRGEDLGLVIS----------------KNANNYENSSKFKNILRLASVGEVHALSEKKQEEAILLKICRKKVLER-KLPMLILDAEYQFDRHKLTFFFEAETRVDFRELVRDLFSIYKTRIWMQHLDSNRAKLAP 334
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Match: A0A7S3Q058_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q058_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.980e-23 Identity = 65/173 (37.57%), Postives = 101/173 (58.38%), Query Frame = 2 Query: 95 IYQVQFKRGCRSFTLAPRANLNVSVHDFVVVEGDRGEDLGIVVEVLGMQTFME-RRMNLPRSAAQQDQDDQNVGCILRLATLQERQMLPDKFHTEKDIVQSCNELACYGFGLPIVVLDAELQFDRRKLTLFYDCSVRIDFRDFVRQLYATYKTRIWMKKLDQQQSEVQPFAAM 610 +Y V+FKR ++F L+ ++ + +V VE DRGEDLGIV+ + ++ F R+N P D + I RLA+ +E +L K E ++++ C GLP+ V+DAE QFDR KLT F++ + R+DFR+ VR L++ YKTRIWM+++D+ P +M Sbjct: 552 VYTVKFKRSQKNFFLSDHLKGDIKIGSYVKVEADRGEDLGIVLSRIPIEKFNPGARLNAPNLGI----PDLQLKRINRLASDEEIALLSLKKEEEAELLKICKSKTLQR-GLPMNVVDAEYQFDRHKLTFFFEANCRVDFRELVRDLFSIYKTRIWMQQIDKVPGSPLPLGSM 719 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10.28.1 >prot_D-dudresnayi_contig10.28.1 ID=prot_D-dudresnayi_contig10.28.1|Name=mRNA_D-dudresnayi_contig10.28.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=227bp MQHAQHHYQQQHQYQASPAMGMPHLQDLIYQVQFKRGCRSFTLAPRANLNback to top mRNA from alignment at D-dudresnayi_contig10:76249..77719+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10.28.1 ID=mRNA_D-dudresnayi_contig10.28.1|Name=mRNA_D-dudresnayi_contig10.28.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1471bp|location=Sequence derived from alignment at D-dudresnayi_contig10:76249..77719+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10:76249..77719+ >mRNA_D-dudresnayi_contig10.28.1 ID=mRNA_D-dudresnayi_contig10.28.1|Name=mRNA_D-dudresnayi_contig10.28.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1362bp|location=Sequence derived from alignment at D-dudresnayi_contig10:76249..77719+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |