mRNA_C-australica_Contig_10.14.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10.14.1
Unique NamemRNA_C-australica_Contig_10.14.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: A0A836CFD2_9STRA (Mitochondrial carrier protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFD2_9STRA)

HSP 1 Score: 305 bits (781), Expect = 5.510e-98
Identity = 156/288 (54.17%), Postives = 209/288 (72.57%), Query Frame = 1
Query:  208 AIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWEGCP-----PESLRAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGTGAAA--KALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHLGDG---KPLQSSPKLLIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFKHML 1041
            A+AG +AGA++T +LHP+DTAKT++Q+NP  F G+ QA+ H+ KT GP ++YAGVG A++GSMPSSALYFGAYE VK RL     +RW G       P  +RA V +++A CGNAASS++F PKE++KQSLQ    A     A   A+ LV  T+R  G++GLYRGY+A L RN+PSA+LRFTLYEE K+HL       P + SP  L+AGA+AGA+ASGLTTP DV+KTQV+TGRL  +LG I+ LT + ++ G + LY G QPR+++S++FTA+GF SF+  K +L
Sbjct:    2 ALAGAMAGAISTVTLHPIDTAKTLRQSNPQAFKGTIQALSHMLKTHGPGSIYAGVGAAVVGSMPSSALYFGAYESVKARLTRAAGRRWGGGSAQLVLPPGVRAGVHVISAACGNAASSLVFVPKEYVKQSLQAQKGAAMRGQATLNAVALVKATLRQQGIRGLYRGYWATLSRNVPSAILRFTLYEEIKLHLRPNLANMPGKLSPAFLLAGAVAGAVASGLTTPFDVVKTQVATGRLDRNLGVIKSLTKLGREGGIRGLYVGAQPRMLLSSLFTAVGFGSFEAMKTLL 289          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: D7G8X0_ECTSI (Mitochondrial carrier protein-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X0_ECTSI)

HSP 1 Score: 302 bits (774), Expect = 3.770e-96
Identity = 160/310 (51.61%), Postives = 213/310 (68.71%), Query Frame = 1
Query:  187 IVRDGKAAIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWE---GCPPE-----------SLRAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGTGAAAK-ALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHLGDGKPLQSSPKLLIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFKHML--DPVIAEEA 1065
            +VRD K A+AG +AGA+ATA+L P+DTAKT++QANP  F G+  A+ H+C+T+GP A+Y G+ TA++G+MPSSALYFG YE VK RL  V +  +    G P E           + RA    VAA CGNAASS+IF PKE++KQ+LQ S     G A + A  +V  T++  GV+GLYRGY+A L RN+PSA++RF+LYEE K+ +G  + + + P  L+AGALAGA ASG+TTP DVLKT+V+TG L G  G  + + TI    GWK LYAG QPR+VMS +FTA+GF SF+  K +L   P+  +EA
Sbjct:   21 LVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGTRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGGPREGEGXXXXXVHPAARAAAHAVAAACGNAASSLIFVPKEYVKQTLQASGMGAAGGARETAKEIVRRTVKEKGVKGLYRGYWATLSRNVPSAIIRFSLYEEIKLFIGPARLMSAPPAYLLAGALAGACASGMTTPFDVLKTRVATGSLEGGRGFAKNMATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKVVLGVSPLPPDEA 330          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: A0A6H5JI22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI22_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 4.280e-96
Identity = 161/313 (51.44%), Postives = 215/313 (68.69%), Query Frame = 1
Query:  187 IVRDGKAAIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWE---GCPPE-----------SLRAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGTGAAAK-ALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHLGDGKPLQSSPKLLIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFKHML--DPVIAEEAEVC 1074
            +VRD K A+AG +AGA+ATA+L P+DTAKT++QANP  F GS  A+ H+C+T+GP A+Y G+ TA++G+MPSSALYFG YE VK RL  V +  +    G P E           + RA    VAA CGNAASS+IF PKE++KQ+LQ S     G A + A  ++  T+R  GV+GLYRGY+A L RN+PSA++RF+LYEE K+ +G  + + + P  L+AGALAGA ASG+TTP DVLKT+V+TG L G  G ++ + TI    GWK LYAG QPR+VMS +FTA+GF SF+  K +L   P+  ++A V 
Sbjct:  149 LVRDVKMAVAGAMAGAIATAALFPIDTAKTLRQANPKAFKGSRDALAHICRTRGPWAIYTGIPTAVVGAMPSSALYFGTYEAVKTRLMRVAANNFPAGPGGPREGEGXXXXXVHPAARAAAHAVAAACGNAASSLIFVPKEYVKQTLQASGMGAVGGARETAKEIIRRTVREKGVRGLYRGYWATLSRNVPSAIIRFSLYEEIKLFIGPARLMSAPPAYLLAGALAGACASGMTTPFDVLKTRVATGSLEGGRGFVKNMATIVADDGWKGLYAGFQPRVVMSGLFTAVGFGSFEAIKAVLGVSPLPPDKATVA 461          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: A0A7R9UPS8_DIALT (Hypothetical protein (Fragment) n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UPS8_DIALT)

HSP 1 Score: 213 bits (542), Expect = 5.100e-62
Identity = 119/285 (41.75%), Postives = 179/285 (62.81%), Query Frame = 1
Query:  196 DGKAAIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWEGCPPESL--RAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGTGAAAKALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHLG-DGKPLQSSPKLLIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFKHML 1041
            D +  ++G LAGA+    LHPLDT KT++QAN   F G+++ ++ + +  GP  LY G+GTA++G+MPSS ++FG YE +K RL  +        P  SL  RA + +V+A CGNAASS+IF PKE +KQ LQ +  AG     + +  VS  ++ HGV+GLY  Y A + RNIP+ VL+F +YEE ++ L    +      + +  GA++GA +S L TPLDV+KT+++TG+    LG  R L  +A + G   L+AG + R+V +A+F+AIG S ++  K +L
Sbjct:   20 DFRRGLSGSLAGALTNGLLHPLDTVKTVRQANRAQFPGTFRTIRRIWQQNGPRGLYGGLGTAMVGAMPSSFVFFGTYEFMKARLQALK-------PDCSLDERARIHVVSAACGNAASSLIFVPKEMVKQRLQAARVAGVSTGVRQV--VSTIVKEHGVRGLYAAYSATIMRNIPTTVLKFLIYEELRLRLAASDESATLRVRSMACGAISGACSSVLMTPLDVVKTRLATGQYAATLGMRRSLVKLATEEGLSGLFAGAKARMVGAALFSAIGLSCYEACKQLL 295          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: A0A7S2STS4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STS4_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.780e-61
Identity = 126/305 (41.31%), Postives = 183/305 (60.00%), Query Frame = 1
Query:  202 KAAIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWE---------------GCPPES-LRAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNS-AGTGAAAKALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHLGDGKPLQSSPKLLIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFKHMLDPVIAEEA 1065
            ++A+AG +AG V    LHPLDT KT++Q +P  +  +  A+    +T+G  ALY GV  A IG+MPSSALYFG Y+ VKRRL   ++ R +               G P ES +R  V M AA+CGNAASS++F PKEF+KQ LQ +    G G A +   +V+ T++T GV  +Y GY A L RNIPSA +RF +YEE K+ L          +  +AGA++G +AS  TTP+DV+KT+ +TG L    G +  +  + ++ G   L  G+Q RI+ S +F++IGF++F+  K +L    + +A
Sbjct:   31 RSALAGAIAGGVTNTILHPLDTCKTLRQRHPQQYKSTLAALSSTLRTRGIGALYRGVIPAAIGAMPSSALYFGFYDIVKRRLTRFVANRDQQVNSRGGXXXXXXQGGSPLESGIRPVVHMTAAVCGNAASSLVFVPKEFVKQQLQTNTKYRGLGGAFQ---VVAHTVKTKGVGAVYAGYTATLLRNIPSAAIRFVIYEEAKILLESRLGSVGPREFFLAGAVSGLVASSCTTPMDVMKTKFATGALDRSRGLLTCVAEVVRREGAVGLLTGLQGRILWSTLFSSIGFAAFESAKSVLGVPSSSQA 332          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: A0A4D9D8F7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F7_9STRA)

HSP 1 Score: 208 bits (529), Expect = 5.430e-60
Identity = 135/298 (45.30%), Postives = 181/298 (60.74%), Query Frame = 1
Query:  208 AIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWEGCPPESL---------RAPV------SMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGTGAAAKALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHLGD----GKPLQSSPKL-LIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFKHML 1041
            A+AG LAG  +   L+P+D AKT++QA P   A    ++    +  G  +L+AG+  A++GSMPSSALYFG YE VKRRL   +  R E     S          RA V        +AA  GN ASS+IF PKE +KQ LQ+  +A  GA+     + +  +R  GV+GLY GY A L RNIPSAVLRF LYEEFK++LG     G    S P++ ++AGALAGA++S  TTPLDV+KT+++    P     +  L  +AQK G   LYAGV+ R++ SA+FTA+GFSSF+  K +L
Sbjct:    8 ALAGALAGGFSNMVLYPIDVAKTLRQAGP---ASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSVSSDGSKELYQRRAQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALWGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALL 302          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: A0A2V3J0Y3_9FLOR (Protein MITOFERRINLIKE 1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Y3_9FLOR)

HSP 1 Score: 207 bits (526), Expect = 1.690e-59
Identity = 123/283 (43.46%), Postives = 174/283 (61.48%), Query Frame = 1
Query:  208 AIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWEGCPPESLRAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGT--GAAAKALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHL------GDGKPLQSSPKLLIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFK 1032
            A AGG+AG +    LHPLDT KT++QA+P  F G    +  + +T+GP ALYAG+  A+IGS  SSALYFGAYE VK  L ++    ++   P + R P++ ++A CGN ASS++F PKE +KQ +Q +   G   GAA   L          G+ GLYRGY A L RNIPS +LRF +YEE K+ +         KPL + P+++ AG++AG  +S  TTP+DVLKT+ +TG +      +  +  I  + G   L+ G++PRIV +A+F AIGFSS++  K
Sbjct:   23 AAAGGMAGMLTNTLLHPLDTVKTVRQADPTHFRGMAPTLLKIIRTRGPFALYAGIVPALIGSAFSSALYFGAYEMVKGALAQMSPYSFQ--KPRT-RIPLTALSAACGNVASSVLFVPKEVVKQRMQSAVDPGNFFGAAKNVLA-------ASGISGLYRGYKATLLRNIPSTMLRFAIYEEAKLAIRRLKRENSDKPL-TFPEVIAAGSIAGVASSACTTPMDVLKTRFATGAIKPGTAILPAIRDIVGRDGVPGLFVGIRPRIVWAALFAAIGFSSYEVCK 294          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: W7TPC7_9STRA (S-adenosylmethionine carrier 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPC7_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.900e-59
Identity = 137/315 (43.49%), Postives = 185/315 (58.73%), Query Frame = 1
Query:  208 AIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWEGCPPESL---------------RAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGTGAAAKALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHLG----DGKPLQSSPKL-LIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFKHMLDPVIAEEAEVCKK*GQN 1092
            A+AG LAG  +   L+P+D AKT++QA P   A    ++    +  G  +L+AG+  A++GSMPSSALYFG YE VKRRL   +  R E     S                R     +AA  GN ASS+IF PKE +KQ LQ+  +A  GA+     + +  +R  GV+GLY GY A L RNIPSAVLRF LYEEFK++LG     G    S P++ ++AGALAGA++S  TTPLDV+KT+++    P     +  L  +AQK G   LYAGV+ R++ SA+FTA+GFSSF+  K +L    A   E  K  G++
Sbjct:  115 ALAGALAGGFSNMVLYPIDVAKTLRQAGP---ASRGASLSSQARIYGLGSLWAGLTPAVLGSMPSSALYFGVYEYVKRRLVAGIRPRTEASSSISSDGSKELYHRRVQVLRRWTAHALAAAAGNTASSLIFVPKEVLKQQLQMYRNAHGGASLGFPGVFASILREKGVRGLYSGYRATLLRNIPSAVLRFALYEEFKLYLGGQALSGAISLSGPRVAVVAGALAGALSSAATTPLDVIKTRMAINACPPGRDVLGCLLDVAQKEGVPGLYAGVRFRVMYSALFTAVGFSSFEASKALLGVGEAGGEEDAKGSGRH 426          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: A0A7S2DQE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQE7_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.640e-55
Identity = 109/232 (46.98%), Postives = 153/232 (65.95%), Query Frame = 1
Query:  196 DGKAAIAGGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWEGCPPESL-------RAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGTGAAAKALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFKVHLGDG-KPLQSSPKLLIAGALAGAIASGLTTPLDVLKT 867
            D ++A+AGGLAG+  T  LHPLDTAK ++Q NP  +AG+ QA+    + +G   LY+G+  + +GS+PSSALYFG YE VKRRL   L++  +    E +       R  + +V+A  GNA SS++F PKEF+KQ LQ +++   G  A  L ++  T++T G+ GLY GY A L RNIPSA +RF LYEE KV  G     + SS K L+AGA++G ++SG+TTP+DV+KT
Sbjct:   23 DIRSALAGGLAGSFTTGILHPLDTAKVLRQKNPTQYAGTLQALVVTARERGIRPLYSGLWASALGSLPSSALYFGTYECVKRRLY-ALARGCQDAQDEGVARVSARVRPAIHLVSAASGNAVSSLLFVPKEFVKQQLQTASALTNGGKASTLGVIRTTLKTRGIGGLYAGYGATLLRNIPSAGIRFILYEELKVLFGASCDDINSSLKFLLAGAMSGIVSSGITTPMDVIKT 253          
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Match: A0A1Z5JCJ0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCJ0_FISSO)

HSP 1 Score: 195 bits (496), Expect = 3.110e-54
Identity = 120/279 (43.01%), Postives = 165/279 (59.14%), Query Frame = 1
Query:  217 GGLAGAVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTAIIGSMPSSALYFGAYEGVKRRLNEVLSKRWEGCPPESL--RAPVSMVAAICGNAASSIIFAPKEFIKQSLQVSNSAGTGAAAKALPLVSETIRTHGVQGLYRGYFACLKRNIPSAVLRFTLYEEFK--VHLGDGKPLQSSPKLLIAGALAGAIASGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIVMSAMFTAIGFSSFDFFKHML 1041
            GG+AGAV T  L+P+D+AKT++QANP  F   W A+    +       Y GV  A +G++P+SALYFGAYE +K  L +V  +R     P ++  R  +   AA  GN  SS+IF PKEFIKQ LQ  +S            +   +  HG++GLYRGY A L RNIPSA LRF LYEE K  ++   G+    S +L  AGA++GA+ASG  TP+DVLKT++S G+ P DL        +   +GW +LYAG   R++ S +F+A GF +F+  K  +
Sbjct:  126 GGIAGAVGTTLLYPIDSAKTLRQANPEQFPSVWAALWSSRQW------YRGVVPAAVGAIPASALYFGAYEAMKSLLLQVQVQRQPAHQPPTVSSRLLLHASAAASGNILSSMIFVPKEFIKQQLQYGSSTS----------IQHCLAQHGLRGLYRGYQATLLRNIPSAALRFVLYEELKYALYTSRGEEAVGSWRLFAAGAVSGALASGFLTPMDVLKTRMSVGQCPVDLPGC--FHHVLDTAGWTALYAGAGSRMLFSGLFSAAGFGTFETVKRWM 386          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFD2_9STRA5.510e-9854.17Mitochondrial carrier protein-like protein n=1 Tax... [more]
D7G8X0_ECTSI3.770e-9651.61Mitochondrial carrier protein-like n=1 Tax=Ectocar... [more]
A0A6H5JI22_9PHAE4.280e-9651.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9UPS8_DIALT5.100e-6241.75Hypothetical protein (Fragment) n=3 Tax=Diacronema... [more]
A0A7S2STS4_9STRA3.780e-6141.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D8F7_9STRA5.430e-6045.30Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2V3J0Y3_9FLOR1.690e-5943.46Protein MITOFERRINLIKE 1, chloroplastic n=1 Tax=Gr... [more]
W7TPC7_9STRA4.900e-5943.49S-adenosylmethionine carrier 1 n=1 Tax=Nannochloro... [more]
A0A7S2DQE7_9STRA1.640e-5546.98Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A1Z5JCJ0_FISSO3.110e-5443.01Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10contigC-australica_Contig_10:41091..43794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8X0
PFAMsMito_carr
Model size1381
Max annot lvl2759|Eukaryota
KEGG koko:K15111,ko:K15113
KEGG TC2.A.29.18,2.A.29.5
Hectar predicted targeting categorysignal peptide
GOsGO:0000041,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006839,GO:0008150,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0010035,GO:0010038,GO:0010039,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0030001,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0055085
Exons12
Evalue1.27e-98
EggNOG OGsKOG0768@1|root,KOG0768@2759|Eukaryota
Ec32 ortholog descriptionmitochondrial carrier protein-like
Ec32 orthologEc-15_004550.1
DescriptionS-adenosyl-L-methionine transmembrane transport
Cds size1002
COG categoryU
BRITEko00000,ko02000,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586731.7526648-UTR-C-australica_Contig_10:41090..413881682586731.7526648-UTR-C-australica_Contig_10:41090..41388Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 41091..41388 -
1682586731.8896716-UTR-C-australica_Contig_10:43713..437941682586731.8896716-UTR-C-australica_Contig_10:43713..43794Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10 43714..43794 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586731.7679608-CDS-C-australica_Contig_10:41388..414651682586731.7679608-CDS-C-australica_Contig_10:41388..41465Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 41389..41465 -
1682586731.7820556-CDS-C-australica_Contig_10:41636..416791682586731.7820556-CDS-C-australica_Contig_10:41636..41679Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 41637..41679 -
1682586731.7938762-CDS-C-australica_Contig_10:41817..419101682586731.7938762-CDS-C-australica_Contig_10:41817..41910Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 41818..41910 -
1682586731.8019817-CDS-C-australica_Contig_10:42132..422071682586731.8019817-CDS-C-australica_Contig_10:42132..42207Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 42133..42207 -
1682586731.8101132-CDS-C-australica_Contig_10:42289..424021682586731.8101132-CDS-C-australica_Contig_10:42289..42402Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 42290..42402 -
1682586731.8203118-CDS-C-australica_Contig_10:42485..425791682586731.8203118-CDS-C-australica_Contig_10:42485..42579Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 42486..42579 -
1682586731.8297575-CDS-C-australica_Contig_10:42657..427401682586731.8297575-CDS-C-australica_Contig_10:42657..42740Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 42658..42740 -
1682586731.839413-CDS-C-australica_Contig_10:42879..429461682586731.839413-CDS-C-australica_Contig_10:42879..42946Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 42880..42946 -
1682586731.8491607-CDS-C-australica_Contig_10:43070..431391682586731.8491607-CDS-C-australica_Contig_10:43070..43139Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 43071..43139 -
1682586731.858913-CDS-C-australica_Contig_10:43278..434031682586731.858913-CDS-C-australica_Contig_10:43278..43403Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 43279..43403 -
1682586731.869465-CDS-C-australica_Contig_10:43473..435771682586731.869465-CDS-C-australica_Contig_10:43473..43577Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 43474..43577 -
1682586731.879595-CDS-C-australica_Contig_10:43654..437131682586731.879595-CDS-C-australica_Contig_10:43654..43713Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10 43655..43713 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10.14.1prot_C-australica_Contig_10.14.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10 41389..43713 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10.14.1

>prot_C-australica_Contig_10.14.1 ID=prot_C-australica_Contig_10.14.1|Name=mRNA_C-australica_Contig_10.14.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=334bp
MRLQILLLVAQLAWSALGSRSAQPAVAVAPADRWAIVRDGKAAIAGGLAG
AVATASLHPLDTAKTIKQANPGIFAGSWQAVQHVCKTKGPLALYAGVGTA
IIGSMPSSALYFGAYEGVKRRLNEVLSKRWEGCPPESLRAPVSMVAAICG
NAASSIIFAPKEFIKQSLQVSNSAGTGAAAKALPLVSETIRTHGVQGLYR
GYFACLKRNIPSAVLRFTLYEEFKVHLGDGKPLQSSPKLLIAGALAGAIA
SGLTTPLDVLKTQVSTGRLPGDLGTIRGLTTIAQKSGWKSLYAGVQPRIV
MSAMFTAIGFSSFDFFKHMLDPVIAEEAEVCKK*
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mRNA from alignment at C-australica_Contig_10:41091..43794-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10.14.1 ID=mRNA_C-australica_Contig_10.14.1|Name=mRNA_C-australica_Contig_10.14.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2704bp|location=Sequence derived from alignment at C-australica_Contig_10:41091..43794- (Chrysoparadoxa australica CS_1217)
GGTCACCATCCCAGAAACCCCCTCTCCCTAGGCTTGCACCTTGCAGCCTC TCACTACATTTGGACTGGAGAGTGACAAGCAATGCGTCTTCAGATCTTGC TGCTTGTCGCTCAACTGGCATGGTCAGCGCTCGGTTCGAGGTACTCCGCG CTATGCCTTGGGATTTGCGGCTCTGCTCTGCTCCCTCACTTGCCCTCCTC CCCATTGGTTGCATCAGATCTGCCCAGCCTGCAGTTGCCGTGGCGCCAGC GGACCGGTGGGCGATCGTAAGGGATGGGAAGGCCGCAATTGCAGGAGGTC TAGCTGGGGCTGTAGCTACAGGTGAGAACTGAGATCACTCACTTCCTTTC ACTTACCCCTAACCTTTCGTTCATGTCATCACTCTCGCCAGCATCCCTTC ACCCTCTGGACACTGCTAAGACCATCAAGCAGGCCAACCCTGGCATCTTT GCGGGCTCTTGGCAAGCGGTTCAACATGTCTGCAAGACCAAAGGACCATT GGCACTGTATGCTGGAGTAAGTTACAAAGGAAAAAGAAACATGTGGGCAA GACATCCTCAGCAGTTTGCTGTATCATAGTCCATGCTCTGCCCGAAAGGT GAATCAGGCGTTGCTGACCTCACGTTACCCTCTGCTCCTGCCCTATGCTA CCCAGGTGGGCACGGCCATCATTGGCTCGATGCCATCTAGTGCTCTATAC TTTGGTGCTTATGAAGGAGTGAAGGTGATCACCCACCTACTCATCACTAG GTCAACTTCACGTCCCAGTGCAGCATAGCCTCAGCACATCGCACCTGCTG ATGTCTCGCTTGCAGAGCATGCAATCACTTCCTTCTCCTCCACTGCAGAG ACGACTAAATGAGGTTCTATCAAAGCGTTGGGAAGGCTGCCCACCAGAGT CACTGAGGGCACCAGGTGAGTTAGATGGAAAAGTAAACCAAATAAGCAAA TGGCTTTCTCTCCTCTGGTGTGTCTTGGCTCTAAGTTTGAACCTGCAGAT TAGAAAGCGTGCTCTTCATTAATTGCCTTACCTCTCTCTTTCTCTCTGTG CCAGTGAGCATGGTGGCAGCAATATGTGGGAATGCAGCAAGCAGCATCAT ATTTGCCCCAAAGGAGTTCATCAAGCAGTCGCTGCAGGTCAGCCAGCTTG CGTTATATGCATCACCTTACCATCATCATCCTAACCTTTCCTTTCCTCTG GTGCCATCACAACAGGTCTCGAACAGTGCGGGCACAGGGGCGGCGGCAAA GGCACTGCCTCTGGTGAGCGAAACCATCAGAACCCACGGCGTGCAAGGGT TGTATAGAGGTAACATGAAGAGTCTAAAGCAATGAGGAGTCTGCCCTGCC TCAAGCCTCGAGTGAGTCACTGACCATTCAGGGGGTTTGCAGGTTACTTC GCGTGTTTGAAGCGGAACATTCCATCTGCAGTGCTGAGATTCACGCTGTA TGAGGAGTTCAAGGTTCACCTAGGAGATGGGAAGCCGTTGCAGTCCTCAC CAAAGGTGAGTTAGTAGTTTCTGACTTGAGTGAGGCTTGGGGAGAAGTGA TATGGCTGCTGCCTAATCTCCCCACTTCTTCCAGCAGCTACTGATAGCAG GTGCACTGGCTGGGGCAATAGCCAGCGGTCTCACAACCCCTTTAGATGTG CTCAAGACGCAGGTAGCATCATGACTCATGACCAAGGGGCACACATTGCC AGTATTGATCCTCCGCTATAGCGCGCCTTCTTTACCCAACCCACTCTCTT ATGCCCGCAACACAGCCTGCCTTCCACCACCACAGCCTCTGCACTTGCTT CAACTGCTTCAACTGCTTCAACTGCTTCAATAGACTTGCACATCCCCGTT TGTCAACTCAATGGCCCTTCGGCTTGGCCTTCAGGTATCAACTGGCAGAT TACCAGGGGATCTCGGAACAATCAGAGGCTTGACCACGATAGCCCAAAAA AGTGGCTGGAAGAGCTTATATGCAGGGGTAAGCTTTGTCTGATCACTACC TGCTGTTTGAGCTTTGATGTTTTCTTCAATGCCTTTCTTGAGCTGCCATG CTGCCATCCCGCATCTCATCTTACTCCTCTGGCTTAATTGGCTTTCTGCT TCCTCCTAATGACAGGTCCAGCCCCGTATAGTGATGAGTGCTATGTTTAC AGCAATAGGTGAGCTTGACAGCCACAACCACAACCAACCACAAAGAAAGC CTGCATTAGCCAAATCTGACTGTGCAGGGCACTACCTTGCTGGCATACTA GAGCTCTTTTTGGGCCCATGGAGCGCTCAATTTACAAATATGACATGCTC ACTTCTCCCTTGCTGTTGTTTGTTCTCAGGCTTCAGCAGCTTTGATTTCT TCAAGCACATGTTAGACCCGGTGATTGCGGAGGAGGCCGAGGTGTGTAAA AAGTGAGGGCAGAACCAGAAGAAGAGCTCGTGATGATGAGGGCCAGTAGA GCAGGCAAAGACTCACAAGTCTCAAGACTGCAAGCTATCATCAGGGATGG GTGAGAACTATCATCAGGGAAGCATGAAAGCTGTCACAGGGATGGGTGAG AGCTGTAGGCCCTGCTGCCCGCTATGGGGATGGCTCCCTATGCCGCAATT GCAGCACCCAAAGATAGGAGGACAGGGGAATAGAATGAGAAGTGGTATGA GGGAGAGCGGACGCCTTGGCGTGTGGGAGATAGAACAGAGGGCAAGTGGG GGAG
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Coding sequence (CDS) from alignment at C-australica_Contig_10:41091..43794-

>mRNA_C-australica_Contig_10.14.1 ID=mRNA_C-australica_Contig_10.14.1|Name=mRNA_C-australica_Contig_10.14.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1002bp|location=Sequence derived from alignment at C-australica_Contig_10:41091..43794- (Chrysoparadoxa australica CS_1217)
ATGCGTCTTCAGATCTTGCTGCTTGTCGCTCAACTGGCATGGTCAGCGCT
CGGTTCGAGATCTGCCCAGCCTGCAGTTGCCGTGGCGCCAGCGGACCGGT
GGGCGATCGTAAGGGATGGGAAGGCCGCAATTGCAGGAGGTCTAGCTGGG
GCTGTAGCTACAGCATCCCTTCACCCTCTGGACACTGCTAAGACCATCAA
GCAGGCCAACCCTGGCATCTTTGCGGGCTCTTGGCAAGCGGTTCAACATG
TCTGCAAGACCAAAGGACCATTGGCACTGTATGCTGGAGTGGGCACGGCC
ATCATTGGCTCGATGCCATCTAGTGCTCTATACTTTGGTGCTTATGAAGG
AGTGAAGAGACGACTAAATGAGGTTCTATCAAAGCGTTGGGAAGGCTGCC
CACCAGAGTCACTGAGGGCACCAGTGAGCATGGTGGCAGCAATATGTGGG
AATGCAGCAAGCAGCATCATATTTGCCCCAAAGGAGTTCATCAAGCAGTC
GCTGCAGGTCTCGAACAGTGCGGGCACAGGGGCGGCGGCAAAGGCACTGC
CTCTGGTGAGCGAAACCATCAGAACCCACGGCGTGCAAGGGTTGTATAGA
GGTTACTTCGCGTGTTTGAAGCGGAACATTCCATCTGCAGTGCTGAGATT
CACGCTGTATGAGGAGTTCAAGGTTCACCTAGGAGATGGGAAGCCGTTGC
AGTCCTCACCAAAGCTACTGATAGCAGGTGCACTGGCTGGGGCAATAGCC
AGCGGTCTCACAACCCCTTTAGATGTGCTCAAGACGCAGGTATCAACTGG
CAGATTACCAGGGGATCTCGGAACAATCAGAGGCTTGACCACGATAGCCC
AAAAAAGTGGCTGGAAGAGCTTATATGCAGGGGTCCAGCCCCGTATAGTG
ATGAGTGCTATGTTTACAGCAATAGGCTTCAGCAGCTTTGATTTCTTCAA
GCACATGTTAGACCCGGTGATTGCGGAGGAGGCCGAGGTGTGTAAAAAGT
GA
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