prot_C-australica_Contig_10323.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10323.1.1
Unique Nameprot_C-australica_Contig_10323.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length211
Homology
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A222E2K0_9RHOB (HTH-type transcriptional regulator LutR n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E2K0_9RHOB)

HSP 1 Score: 399 bits (1025), Expect = 9.930e-140
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query:    1 MAGKIKPIEQQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211
            MAGKIKPIEQQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD
Sbjct:    1 MAGKIKPIEQQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A1F8SI98_9CHLR (GntR family transcriptional regulator n=1 Tax=Chloroflexi bacterium RBG_16_72_14 TaxID=1797663 RepID=A0A1F8SI98_9CHLR)

HSP 1 Score: 192 bits (489), Expect = 1.820e-58
Identity = 102/197 (51.78%), Postives = 143/197 (72.59%), Query Frame = 0
Query:   16 VAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDAD-DAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211
            ++ E+ + LL +LL+GDIKPG+R+P ERKLA ALGVGR+V+RE LKSLT+LGLV+ RQGDG YL+ TESE LP++IEWG++LG K T DL+E+R+ LE  +  LAA R TD+++  L EL+++MR A  D  +F  ADVAFHL + +AA NETL  ++  + SLL+VW  RV+     +   + +H+ ++ AL A D
Sbjct:    1 MSTEIARRLLSYLLAGDIKPGERIPSERKLAVALGVGRSVVREALKSLTLLGLVDVRQGDGTYLRGTESELLPQSIEWGLMLGQKRTRDLVEARRYLEEVLAGLAATRRTDEDLVALAELVEEMRAASADPDRFVAADVAFHLRVTRAAGNETLGGVIRGIRSLLQVWISRVMHSADSYAPSVAEHAAVLAALEAGD 197          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: UPI001F3F8845 (FadR family transcriptional regulator n=1 Tax=Spiractinospora alimapuensis TaxID=2820884 RepID=UPI001F3F8845)

HSP 1 Score: 185 bits (469), Expect = 3.940e-55
Identity = 98/193 (50.78%), Postives = 131/193 (67.88%), Query Frame = 0
Query:   15 SVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEAL 207
            S   E+   L+  +L+GDI PG +LPPER+LAE LGVGR+ +RE LK+L +LGL+E RQGDG YL    S  LP+ +EWGMLLG   T DLIE+R  LE+ + RLAAERITD E   L   + +M  A+ AA FARAD  FHL I  AARN+ L  I++++ SLL VW  RV+ +  + + +I+QH  I++A+
Sbjct:   25 SAVSEIVSQLVSRILAGDIPPGGKLPPERRLAENLGVGRSAIREALKALDLLGLIEIRQGDGTYLSQGTSSLLPQVVEWGMLLGTPQTLDLIETRSHLEVILARLAAERITDDEASALRTCLTRMGFAESAADFARADTEFHLTIAAAARNQVLSDILSSIKSLLHVWVLRVIRQTGERESVIEQHQAILDAV 217          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A4Q9DEU8_9BACL (FadR family transcriptional regulator n=1 Tax=Paenibacillus thalictri TaxID=2527873 RepID=A0A4Q9DEU8_9BACL)

HSP 1 Score: 182 bits (462), Expect = 3.540e-54
Identity = 98/209 (46.89%), Postives = 143/209 (68.42%), Query Frame = 0
Query:    4 KIKPIEQQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAK-FARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211
            K  PIE++   ++  E+TKNLL +LLSG +KPGD++P ER L+EALGVGR+ LRE LK+LTVLGL+E RQGDG YLK  +S+ LP+ IEWG+LLG K T  LIE+R+ +EL +  +AAER  + E+ +L +++++MR++   +K F  ADVAFHL + + A N  L  I++++ +LL+ W R V+    +     D+H  I  A+   D
Sbjct:   10 KFNPIERK---TIVTEITKNLLDYLLSGQVKPGDKIPTERSLSEALGVGRSSLREALKALTVLGLLEVRQGDGTYLKRADSDLLPQVIEWGLLLGEKQTLHLIEAREKIELMLAGMAAERRQENEVLELKQILERMRNSTGNSKEFVEADVAFHLKLAEMANNTVLRDILSSIQALLRAWIRSVIEAAGNAQFSYDEHLPIYLAVEKGD 215          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A8I1S6T0_9ACTN (FadR family transcriptional regulator n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A8I1S6T0_9ACTN)

HSP 1 Score: 181 bits (460), Expect = 5.110e-54
Identity = 95/207 (45.89%), Postives = 135/207 (65.22%), Query Frame = 0
Query:    5 IKPIEQQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211
            +KP+E +R+ +   E+ + LL +LLSG  +PG RLP ER LA  L VGR+V+RE LKSL +LG+VE RQGDG +L++ ES+ LP  IEWG+LLG + T DLIE R+ +E+    LAAER  ++ + K+   +D M  A +   F  AD+ FHL I  AA N  LLQIM ++ +LL+VW  + +    D   + D+H  +VEA++A D
Sbjct:    1 MKPLEVERREATTTEIARRLLRYLLSGAFEPGHRLPSERTLASELAVGRSVIREALKSLVLLGIVEVRQGDGTFLRSAESDLLPNVIEWGLLLGTRSTRDLIEIRRYMEVLTAGLAAERRDERALEKMWSELDAMYAASNPTAFVAADIGFHLAIAAAAGNGVLLQIMTSVRTLLRVWITKNVENLDDTKSIADEHKPVVEAIQAGD 207          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A3L7A316_9MICO (FadR family transcriptional regulator n=1 Tax=Mycetocola tolaasinivorans TaxID=76635 RepID=A0A3L7A316_9MICO)

HSP 1 Score: 180 bits (457), Expect = 2.010e-53
Identity = 92/200 (46.00%), Postives = 140/200 (70.00%), Query Frame = 0
Query:   12 RQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211
            R+ SV+V V++ L    LSG++ PG +LPPER LAEALGVGR+ +RE LK+L +LGL+E RQGDG YL+++ S  LP+ +EWG++LG+  T++L+E+R  LE+++  LAAER + +EI ++      M +ADD A FARAD+ FHL +  AA N  L  +++N+ SLL+VW  R + +  +    +DQH+ +++A+ A D
Sbjct:   20 RESSVSVLVSQ-LASRFLSGEVVPGGKLPPERALAEALGVGRSAVREALKALDLLGLIEIRQGDGTYLRSSASSLLPQVVEWGLMLGSTQTDELVEARYHLEITLAGLAAERASAEEIAEITRWFQAMGEADDVADFARADIEFHLAVAAAAHNGVLAGVLSNVKSLLEVWVVRAIRQSGERASTLDQHAAVLQAITAGD 218          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A1M4Y848_9BACL (GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex n=1 Tax=Seinonella peptonophila TaxID=112248 RepID=A0A1M4Y848_9BACL)

HSP 1 Score: 178 bits (452), Expect = 9.570e-53
Identity = 96/203 (47.29%), Postives = 140/203 (68.97%), Query Frame = 0
Query:   10 QQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDAD-DAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211
            ++R+P +A+E+T  ++ +L SG + PGDRLP ER+LA+ LGVGR+V+R+ LKSL++LG++E RQGDG Y ++  SE LPR IEWG+LLG K   DL E R  +E++IV+LAAER   + I +L  L++ M++A  D   FA AD+ FH+ I KA++N  L  I+++M SLL  W +RV+A   D     D+H  I EA++  D
Sbjct:    9 KKREP-LALEITNQIIEYLQSGKVNPGDRLPSERQLAQNLGVGRSVVRDALKSLSLLGILEIRQGDGTYFQSISSELLPRTIEWGLLLGKKRVLDLAECRHYIEIAIVKLAAERRDQQTIEELSALLETMKNARFDTETFAEADLQFHMKIAKASQNTALHDILSSMRSLLDFWIKRVIAAAGDSQYSYDRHLAIFEAIKEGD 210          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A840P7I5_9ACTN (DNA-binding FadR family transcriptional regulator n=2 Tax=Thermocatellispora tengchongensis TaxID=1073253 RepID=A0A840P7I5_9ACTN)

HSP 1 Score: 178 bits (451), Expect = 1.770e-52
Identity = 92/199 (46.23%), Postives = 134/199 (67.34%), Query Frame = 0
Query:   12 RQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAH 210
            ++ S  V++ + LL  LLSG + PG RLP ER+L+E+LGVGR+ +RE LK+L VLG+++ RQGDG YLK + S  LP AIEWG++LG     DLIE+R+ +E+ I  LAAER  ++ I +L   ++ MR A D+  F  ADVAFHL + +AA N  L  I+ ++ SLL+VW RR + E  + +  I +H+ ++EA+  H
Sbjct:   25 QRESAVVDIARQLLSQLLSGHLAPGTRLPSERQLSESLGVGRSTIREALKALDVLGIIDVRQGDGTYLKQSTSSLLPSAIEWGLMLGQPQVLDLIEARRHIEIVIAELAAERAGEEVIAELRHHLEDMRSAADSVAFVEADVAFHLALAQAADNSVLNDILGSIRSLLRVWIRRAIHEAGETETTIAEHAAVLEAVERH 223          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A7W0TWM6_9CHLR (FadR family transcriptional regulator n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0TWM6_9CHLR)

HSP 1 Score: 177 bits (450), Expect = 3.750e-52
Identity = 99/215 (46.05%), Postives = 142/215 (66.05%), Query Frame = 0
Query:    1 MAGKIKPIEQQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADD----AAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211
            M+G +  IE  R+  +A+E+ + L+ +LLSG+I PG R+P ER+LAEA GVGR+ +RE +KSL++LGLV+ R GDG YL+  ++  LP+ IEWG+LLG   T DL+E+RQ +E  I  LAAER TD ++ +L  L+ +M  A +    AA F  ADVAFHL + +AARN  L  ++  + +LL+VW  RV+A   D D    +H  I+EA+   D
Sbjct:    1 MSGLLAGIEPIRREPIAIEIARRLVDYLLSGEIGPGQRMPSERQLAEAFGVGRSAMREAIKSLSLLGLVDVRHGDGTYLRKADASLLPQVIEWGLLLGEPRTRDLVEARQKIEEVIAALAAERRTDDDVGELRVLLARMETAAEPEVAAAVFVEADVAFHLRLAEAARNTALRDVLGGIQALLRVWISRVIAAG-DRDVSYREHVPILEAVERGD 214          
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Match: A0A1H7B463_9MICC (GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex n=3 Tax=Arthrobacter TaxID=1663 RepID=A0A1H7B463_9MICC)

HSP 1 Score: 177 bits (449), Expect = 5.310e-52
Identity = 90/207 (43.48%), Postives = 134/207 (64.73%), Query Frame = 0
Query:    5 IKPIEQQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALGVGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAKVTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFARADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQHSGIVEALRAHD 211
            +KP+        + EV K LL ++ SG + PG++LP ER+L+E+ GVGR+V+REG+KSL +LGLVE R G G +L+   SE LPR IEWG++LG + T+DL+E+RQ +E     LAA R TD +++++ + +D M DA    +F  ADV FHL +  A+ N  L  ++ N+ +LL+VW  RV+  E  FD    +H+ + EA+ A D
Sbjct:   31 LKPVSVVHAEPASSEVAKALLDYIFSGQVAPGEKLPSERQLSESFGVGRSVVREGIKSLGLLGLVEFRHGGGTFLRNANSELLPRVIEWGLMLGERRTSDLVEARQHIERVTAGLAATRRTDADLKRIKKALDAMGDAKTTEEFVSADVDFHLAVADASGNTVLANMLKNIAALLRVWIHRVMDAETSFDGSHAEHTPVYEAILAGD 237          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10323.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E2K0_9RHOB9.930e-140100.00HTH-type transcriptional regulator LutR n=2 Tax=Ro... [more]
A0A1F8SI98_9CHLR1.820e-5851.78GntR family transcriptional regulator n=1 Tax=Chlo... [more]
UPI001F3F88453.940e-5550.78FadR family transcriptional regulator n=1 Tax=Spir... [more]
A0A4Q9DEU8_9BACL3.540e-5446.89FadR family transcriptional regulator n=1 Tax=Paen... [more]
A0A8I1S6T0_9ACTN5.110e-5445.89FadR family transcriptional regulator n=1 Tax=Acti... [more]
A0A3L7A316_9MICO2.010e-5346.00FadR family transcriptional regulator n=1 Tax=Myce... [more]
A0A1M4Y848_9BACL9.570e-5347.29GntR family transcriptional regulator, transcripti... [more]
A0A840P7I5_9ACTN1.770e-5246.23DNA-binding FadR family transcriptional regulator ... [more]
A0A7W0TWM6_9CHLR3.750e-5246.05FadR family transcriptional regulator n=1 Tax=Chlo... [more]
A0A1H7B463_9MICC5.310e-5243.48GntR family transcriptional regulator, transcripti... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availablePANTHERPTHR43537:SF34PYRUVATE DEHYDROGENASE COMPLEX REPRESSORcoord: 10..211
NoneNo IPR availablePANTHERPTHR43537TRANSCRIPTIONAL REGULATOR, GNTR FAMILYcoord: 10..211
IPR000524Transcription regulator HTH, GntRPRINTSPR00035HTHGNTRcoord: 53..69
score: 35.65
coord: 39..53
score: 45.86
IPR000524Transcription regulator HTH, GntRSMARTSM00345gntr3coord: 20..79
e-value: 3.8E-12
score: 56.3
IPR000524Transcription regulator HTH, GntRPFAMPF00392GntRcoord: 21..77
e-value: 2.0E-15
score: 56.1
IPR000524Transcription regulator HTH, GntRPROSITEPS50949HTH_GNTRcoord: 14..82
score: 20.449358
IPR000524Transcription regulator HTH, GntRCDDcd07377WHTH_GntRcoord: 29..80
e-value: 9.37484E-15
score: 64.3908
IPR011711GntR, C-terminalSMARTSM00895FCD_2coord: 104..211
e-value: 1.8E-10
score: 50.8
IPR011711GntR, C-terminalPFAMPF07729FCDcoord: 104..211
e-value: 4.1E-23
score: 82.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 5..79
e-value: 3.1E-16
score: 60.9
IPR008920Transcription regulator FadR/GntR, C-terminalGENE3D1.20.120.530coord: 102..211
e-value: 2.0E-25
score: 91.5
IPR008920Transcription regulator FadR/GntR, C-terminalSUPERFAMILY48008GntR ligand-binding domain-likecoord: 104..211
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 12..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10323contigC-australica_Contig_10323:193..825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10323.1.1mRNA_C-australica_Contig_10323.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10323 193..825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10323.1.1 ID=prot_C-australica_Contig_10323.1.1|Name=mRNA_C-australica_Contig_10323.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=211bp
MAGKIKPIEQQRQPSVAVEVTKNLLGFLLSGDIKPGDRLPPERKLAEALG
VGRTVLREGLKSLTVLGLVEGRQGDGNYLKATESEFLPRAIEWGMLLGAK
VTNDLIESRQVLELSIVRLAAERITDKEIRKLDELMDKMRDADDAAKFAR
ADVAFHLVIVKAARNETLLQIMNNMLSLLKVWTRRVLAEEVDFDELIDQH
SGIVEALRAHD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000524Tscrpt_reg_HTH_GntR
IPR011711GntR_C
IPR036388WH-like_DNA-bd_sf
IPR008920TF_FadR/GntR_C
IPR036390WH_DNA-bd_sf