prot_C-australica_Contig_10319.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10319.1.1
Unique Nameprot_C-australica_Contig_10319.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length232
Homology
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A2E5AHL0_9PROT (Replication-associated recombination protein A n=3 Tax=Oceanicaulis TaxID=153232 RepID=A0A2E5AHL0_9PROT)

HSP 1 Score: 389 bits (998), Expect = 2.200e-132
Identity = 193/227 (85.02%), Postives = 206/227 (90.75%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 227
            DGRY+LNLAEE+ AL PE PL++ DL+ VLQ+RAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML+AGEDP+YLARRIVRMANE+IGLAD GAVHAALAAKDVYEFLGSPEGDLALAQAVVH+ACAPKSNAVY AWK ALRTAK TGSLMPP HILNAPTKLMK  GYGKGYEYDHD EGGVSGQNYFP EM + P FYEP  +GREAAL ERLERFRA+R
Sbjct:  204 DGRYMLNLAEELIALKPETPLDLKDLSSVLQKRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLSAGEDPLYLARRIVRMANEEIGLADPGAVHAALAAKDVYEFLGSPEGDLALAQAVVHIACAPKSNAVYTAWKAALRTAKGTGSLMPPAHILNAPTKLMKEVGYGKGYEYDHDVEGGVSGQNYFPTEMGKPPTFYEPKPQGREAALLERLERFRAVR 430          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: UPI001F1EC238 (replication-associated recombination protein A n=1 Tax=Hyphobacterium sp. SN044 TaxID=2912575 RepID=UPI001F1EC238)

HSP 1 Score: 388 bits (997), Expect = 3.010e-132
Identity = 189/227 (83.26%), Postives = 212/227 (93.39%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 227
            DGRYLLNLAEEVF   P+ PL+ +++A +LQ+RAPAYDKDREEHYNLISALHK+VRGSDPDAALYWLARML AGEDP++LARRIVRMA EDIGLAD  A+HAALAAKDVY+FLGSPEG+LALAQAVVHLACAPKSNAVY AWKGA++TA++TGSLMPPKHILNAPTKLMKSEGYG GYEYDHDAEGGVSGQ+YFPDEM+ERPVFY PT+RGREA + ERLER+R+IR
Sbjct:  204 DGRYLLNLAEEVFESEPDHPLDPAEIAELLQKRAPAYDKDREEHYNLISALHKAVRGSDPDAALYWLARMLGAGEDPLFLARRIVRMAIEDIGLADPTAIHAALAAKDVYDFLGSPEGELALAQAVVHLACAPKSNAVYTAWKGAMKTARETGSLMPPKHILNAPTKLMKSEGYGSGYEYDHDAEGGVSGQDYFPDEMKERPVFYRPTDRGREAVIAERLERWRSIR 430          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A2U2BRQ3_9PROT (Replication-associated recombination protein A n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BRQ3_9PROT)

HSP 1 Score: 377 bits (967), Expect = 1.000e-127
Identity = 188/230 (81.74%), Postives = 207/230 (90.00%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIRRGR 230
            DGRYLLNLAEEV AL  E+PLE++DL  VLQRRAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML  GEDP++LARRIVRMANEDIGLAD  AVHAALAAK+VY+FLGSPEG+LALAQAVVHLACAPKSNAVYKA+  A+R AK TGSLMPPKHILNAPTKLMKSEGYG GYEYDH  EGGVSGQ+YFP+ M +RPVFY PT+ GREAA++ERLER+R +R+ R
Sbjct:  204 DGRYLLNLAEEVLALDAEQPLELADLGEVLQRRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLAGGEDPLFLARRIVRMANEDIGLADPTAVHAALAAKEVYDFLGSPEGELALAQAVVHLACAPKSNAVYKAYGAAMRAAKQTGSLMPPKHILNAPTKLMKSEGYGSGYEYDHAVEGGVSGQDYFPEAMTDRPVFYSPTDHGREAAIRERLERWRGLRKDR 433          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: UPI001EDDCC42 (replication-associated recombination protein A n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDDCC42)

HSP 1 Score: 376 bits (966), Expect = 1.470e-127
Identity = 185/230 (80.43%), Postives = 210/230 (91.30%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIRRGR 230
            DGRYLLNLAE+VFA AP+ PL+ + L  ++QRRAP+YDK  + HYNLISALHKS+RGSDPDAALYWLARML AGEDP++LARR+VRMANEDIGLAD GAVHAALAAKDVY+FLGSPEG+LALAQAVVHLACAPKSNAVYKAWK A+R+AK TGSL PPKHILNAPTKLMK+EGYG+GYEYDHDA GGVSGQ+YFPDEM +RPVFYEP + GREA LKERL+R+RA+R+ R
Sbjct:  204 DGRYLLNLAEQVFAAAPDAPLDPAGLGQLVQRRAPSYDKAGDSHYNLISALHKSIRGSDPDAALYWLARMLEAGEDPLFLARRLVRMANEDIGLADPGAVHAALAAKDVYDFLGSPEGELALAQAVVHLACAPKSNAVYKAWKAAVRSAKATGSLSPPKHILNAPTKLMKAEGYGQGYEYDHDAAGGVSGQDYFPDEMTDRPVFYEPKDGGREAQLKERLDRWRALRKER 433          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A3C2E430_9PROT (Replication-associated recombination protein A n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A3C2E430_9PROT)

HSP 1 Score: 375 bits (963), Expect = 4.330e-127
Identity = 184/227 (81.06%), Postives = 204/227 (89.87%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 227
            DGRYLLNLAEEVF   P   LE  ++A +LQ+RAPAYDKDR+EHYNLISALHKS+RGSDPDAALYWLARML AGEDP+YLARR+VRMANEDIGLAD  A+HAALAAKDVY+FLGSPEG+LALAQAVVHLA APKSNAVY AWKGA+R A++TGSLMPPKHILNAPTKLMKSEGYG GYEYDHDA GG+SGQ+YFPDEMR+RPV Y PT+RGREAA+ ERL  +R IR
Sbjct:  204 DGRYLLNLAEEVFESPPGHNLEPGEIAELLQKRAPAYDKDRDEHYNLISALHKSIRGSDPDAALYWLARMLGAGEDPLYLARRLVRMANEDIGLADPTAIHAALAAKDVYDFLGSPEGELALAQAVVHLAAAPKSNAVYTAWKGAMRLARETGSLMPPKHILNAPTKLMKSEGYGSGYEYDHDAAGGISGQDYFPDEMRDRPVLYSPTDRGREAAIAERLAHWRGIR 430          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A5M6ZI18_9PROT (Replication-associated recombination protein A n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZI18_9PROT)

HSP 1 Score: 374 bits (961), Expect = 8.430e-127
Identity = 188/230 (81.74%), Postives = 204/230 (88.70%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIRRGR 230
            DGRYLLNLAE+VF   PE  L+ + L  ++QRRAP YDKDRE HYNLISALHKSVRGSDPDAALYWLARML AGEDP+YLARR+VRMANEDIGLAD GAVHAALAAKDVY+FLGSPEG+LALAQAVVHLACAPKSNAVY AWK A RTAK TGSL PPKHILNAPTKLMK+EGYG GYEYDHDA  GVSGQ+YFPDEM ERPVFY+P +RGREA LKERL R+RA+R+ R
Sbjct:  204 DGRYLLNLAEQVFTAEPEAALDPAGLGALVQRRAPVYDKDREGHYNLISALHKSVRGSDPDAALYWLARMLEAGEDPLYLARRLVRMANEDIGLADPGAVHAALAAKDVYDFLGSPEGELALAQAVVHLACAPKSNAVYAAWKAAQRTAKATGSLNPPKHILNAPTKLMKAEGYGAGYEYDHDAPDGVSGQDYFPDEMGERPVFYQPGDRGREAQLKERLARWRALRKER 433          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A4S2H3A3_9PROT (Replication-associated recombination protein A n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2H3A3_9PROT)

HSP 1 Score: 373 bits (958), Expect = 1.980e-126
Identity = 189/227 (83.26%), Postives = 203/227 (89.43%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 227
            DGRYLLNLAEEV AL P+ PL ++DL+GVLQRRAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML  GEDP+YLARRIVRMANEDIGLAD  AVHAALAAKDVY+FLGSPEG+LALAQAVVHLA APKSNAVY AWK A R AK+TGSLMPPKHILNAPT+LMK EGYGKGY YDHD EGGVSGQNYFP+EM ERP FY P + GREAA+KERLER+  +R
Sbjct:  204 DGRYLLNLAEEVLALQPDAPLGLADLSGVLQRRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLAGGEDPLYLARRIVRMANEDIGLADPTAVHAALAAKDVYDFLGSPEGELALAQAVVHLASAPKSNAVYTAWKAAQRAAKETGSLMPPKHILNAPTRLMKEEGYGKGYRYDHDVEGGVSGQNYFPEEM-ERPRFYAPKDVGREAAIKERLERWGKLR 429          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A550K784_9PROT (Replication-associated recombination protein A n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550K784_9PROT)

HSP 1 Score: 372 bits (955), Expect = 6.850e-126
Identity = 186/227 (81.94%), Postives = 204/227 (89.87%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 227
            DGRY+LNLAEE  AL P  PL  +DLA +LQ+RAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML  GEDP+YLARRIVRMANEDIGLAD  AVHAALAAKDVY+FLGSPEG+LALAQAVVHLA APKSNAVY AWK A+R+A++TGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQ+YFP+EM++RP FY+P   GREAA+KERLE +  IR
Sbjct:  204 DGRYILNLAEEALALDPPAPLTPADLARMLQKRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLAGGEDPLYLARRIVRMANEDIGLADPTAVHAALAAKDVYDFLGSPEGELALAQAVVHLAAAPKSNAVYVAWKAAMRSARETGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQDYFPEEMKDRPRFYDPKPVGREAAIKERLEAWGKIR 430          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A4S2H806_9PROT (Replication-associated recombination protein A n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2H806_9PROT)

HSP 1 Score: 366 bits (939), Expect = 1.500e-123
Identity = 186/228 (81.58%), Postives = 206/228 (90.35%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIRR 228
            DGRYLLNLAEE+F+L  E+PL ++DLA VLQRRAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML  GEDP++LARRIVRMANEDIGLAD  AVHAALAAK+VY+FLGSPEG+LALAQAVVHLACAPKSNAVY A+K A+R+AK TGSLMPPKHILNAPTKLMKSEGYG+GY YDH+  GGVSGQNYFP+ M ER  FYEPT+RGREAA+KERLE +  +RR
Sbjct:  204 DGRYLLNLAEELFSLKLEKPLGLADLADVLQRRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLAGGEDPLFLARRIVRMANEDIGLADPTAVHAALAAKEVYDFLGSPEGELALAQAVVHLACAPKSNAVYTAYKAAMRSAKSTGSLMPPKHILNAPTKLMKSEGYGEGYRYDHNEAGGVSGQNYFPEGM-ERERFYEPTDRGREAAIKERLEHWDKLRR 430          
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A3D5ZV54_9PROT (Replication-associated recombination protein A n=5 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3D5ZV54_9PROT)

HSP 1 Score: 359 bits (921), Expect = 9.460e-121
Identity = 178/227 (78.41%), Postives = 196/227 (86.34%), Query Frame = 0
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 227
            DGRYLLNLAEEV  L  E PL  ++L   LQRRAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML AGEDP++LARRIVRMANEDIGLAD  A+HAALAAK+ Y+FLGSPEG+LALAQAVVHLACAPKSNAVY AWK A R A  TGSLMPP HILNAPT+LMK +GYGKGYEYDHDA GG+SGQ+Y PD M++RP  YEP + GREAA+ ERLER+RA+R
Sbjct:  204 DGRYLLNLAEEVLRLEAETPLSTAELGRFLQRRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLGAGEDPLFLARRIVRMANEDIGLADPTAIHAALAAKETYDFLGSPEGELALAQAVVHLACAPKSNAVYTAWKAAQRLAGQTGSLMPPAHILNAPTRLMKEQGYGKGYEYDHDAPGGMSGQDYLPDAMKDRPRLYEPKDSGREAAIAERLERWRALR 430          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5AHL0_9PROT2.200e-13285.02Replication-associated recombination protein A n=3... [more]
UPI001F1EC2383.010e-13283.26replication-associated recombination protein A n=1... [more]
A0A2U2BRQ3_9PROT1.000e-12781.74Replication-associated recombination protein A n=1... [more]
UPI001EDDCC421.470e-12780.43replication-associated recombination protein A n=1... [more]
A0A3C2E430_9PROT4.330e-12781.06Replication-associated recombination protein A n=2... [more]
A0A5M6ZI18_9PROT8.430e-12781.74Replication-associated recombination protein A n=1... [more]
A0A4S2H3A3_9PROT1.980e-12683.26Replication-associated recombination protein A n=1... [more]
A0A550K784_9PROT6.850e-12681.94Replication-associated recombination protein A n=1... [more]
A0A4S2H806_9PROT1.500e-12381.58Replication-associated recombination protein A n=1... [more]
A0A3D5ZV54_9PROT9.460e-12178.41Replication-associated recombination protein A n=5... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.272.10coord: 31..134
e-value: 2.1E-41
score: 142.0
NoneNo IPR availableGENE3D1.10.3710.10coord: 135..230
e-value: 2.4E-31
score: 109.8
NoneNo IPR availablePANTHERPTHR13779WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBERcoord: 1..214
IPR032423AAA C-terminal domainPFAMPF16193AAA_assoc_2coord: 1..56
e-value: 3.1E-13
score: 49.8
IPR021886MgsA AAA+ ATPase C-terminalPFAMPF12002MgsA_Ccoord: 57..223
e-value: 4.1E-67
score: 225.2
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 42..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10319contigC-australica_Contig_10319:2..697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10319.1.1mRNA_C-australica_Contig_10319.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10319 2..697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10319.1.1 ID=prot_C-australica_Contig_10319.1.1|Name=mRNA_C-australica_Contig_10319.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=232bp
DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISA
LHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAV
HAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAK
DTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRE
RPVFYEPTERGREAALKERLERFRAIRRGRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032423AAA_assoc_2
IPR021886MgsA_C
IPR008921DNA_pol3_clamp-load_cplx_C