mRNA_C-australica_Contig_1026.6.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1026.6.1
Unique NamemRNA_C-australica_Contig_1026.6.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A835YZP2_9STRA (Threonylcarbamoyl-AMP synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZP2_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.080e-75
Identity = 139/307 (45.28%), Postives = 185/307 (60.26%), Query Frame = 2
Query:   83 CLLEGTFLTQAFMTPLSPPSREG---STLLEAKRGGTK----APHKCLEIECLEES-DYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQKKPLSLLCNSISTINQYTGGVDKSLFKRLKKALPGPYTLILPATHE------------VPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPH--ANASDEDEGEDDHTPVRDPVELLTWKKNPK-----------------VDFIVDAGVVEPQPGFTSIGFSTVVDFMGPEPLVIREGLGDPSFL 886
            CL   +    AF  PL   +R G   ++    +  GTK    A  KCL++E   E  D WKL P ++ L+ GG+GV+P D+CYVFACD+HSR GV++IF LK++  ++KPLSLLC  ISTI++++ G+DK LFK LK+ALPGPYT I+PATH+            VPR+LL HK+HKKTWKRRE+GVR+PDQP+   +L+ LE+PL+CSSVP   +NA  +D+         D      W K  +                 VDFIV+AG +      TS G STVV+ M   P V+R+GLGDP  L
Sbjct:   13 CLACSSRCVTAFTAPLQQTARTGKVRTSTTVCRAAGTKSRGAAASKCLQVEVDPEGFDNWKLAPIIETLQNGGVGVLPTDTCYVFACDVHSRRGVDRIFQLKQYVGKRKPLSLLCKDISTISKHSDGIDKDLFKVLKRALPGPYTFIVPATHQARTSMSDNHTARVPRMLLDHKSHKKTWKRREVGVRIPDQPVLHAVLEALENPLICSSVPARLSNAPHDDDXXFXXXXXXD----AEWSKAARAQLATDPQQIADAWGHAVDFIVNAGPI------TSAGVSTVVNCMARPPEVLRQGLGDPGLL 309          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7S4D661_HETAK (Threonylcarbamoyl-AMP synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D661_HETAK)

HSP 1 Score: 196 bits (499), Expect = 2.310e-57
Identity = 105/241 (43.57%), Postives = 148/241 (61.41%), Query Frame = 2
Query:  152 STLLEAKRGGTKAPHKCLEIECLEES-DYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQKKPLSLLCNSISTINQYTGGVDKSLFKRLKKALPGPYTLILPATHEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPHANASDEDEGEDDHTPVRDPVELLTWKKNPKVDFIVDAGVVEPQPGFTSIGFSTVVDFMGPEPLVIREGLG 871
            +T L AK+ G       L ++  + S D W+L+P +D+++ G +GVIP D+ Y F CD+H+  GVE++  LK   + KKPL+LLC  IS I++YT   DK++FK LK+  PGPYTLI+ A+ EVP+  ++ K H++ WKRRE+GVR+PDQ +C  IL  L+ PLLCSSVP   +S E+     +        +  W    +VDF+VD G +          FSTVVD   PEP V+REG G
Sbjct:   46 NTRLHAKKYGNTYGGDPLYVQIEDPSYDGWRLDPVIDLIKQGAVGVIPTDTSYAFVCDVHNTNGVERMMRLKHAESVKKPLALLCKDISMISKYTKSTDKTVFKLLKQCFPGPYTLIMSASPEVPKGFVESKTHRRLWKRREVGVRVPDQEVCSLILSELDDPLLCSSVP---SSKEEYNMPSYIHREASSIMEAWYN--QVDFVVDCGPIP-----ADFKFSTVVDLTLPEPAVLREGSG 276          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7S0ZI44_9RHOD (Threonylcarbamoyl-AMP synthase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI44_9RHOD)

HSP 1 Score: 195 bits (496), Expect = 3.210e-57
Identity = 106/251 (42.23%), Postives = 150/251 (59.76%), Query Frame = 2
Query:  140 SREGSTLLEAKRGGTKAPHKCLEIECLEESDY--WKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQKKPLSLLCNSISTINQYTGGVDKSLFKRLKKALPGPYTLILPATHEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPHANASDEDEGEDDHTPVRDPVELLTWKKNPKVDFIVDAGVVEPQPGFTSIGFSTVVDFMGPEPLVIREGLGDPSFL 886
            S++ S  L AKR G+ +  K  E   + E +Y  WKL+    +L+ G LG+IP DS Y F C + +R G+++I+ LK  +  KKPLSL+C+++S + +YT  +DK +FK L+ ALPGPYT ILPA   VPRV+L+HK H+K WKRRE+G+R+P+   CL IL+ LE PLL SS+         + E++ +  +D    L  +    VDFIV  G  +  P       ST++D       VIREG GD S L
Sbjct:   31 SKDSSIYLAAKRSGSASTAKVAEYVDITEGEYDLWKLDSIPKMLKEGALGIIPTDSSYSFVCTMSNREGMDRIYQLKNLSGTKKPLSLICSNLSMVQKYTHSIDKPMFKMLRAALPGPYTFILPANSSVPRVILEHKVHRKVWKRREVGIRVPNDMYCLAILEQLEEPLLVSSI---------QDEENESKSQDCPGALLDRWGSSVDFIVGVGERKKHP-------STIIDCTKIPYEVIREGSGDLSIL 265          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7J7IFU6_9RHOD (Threonylcarbamoyl-AMP synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFU6_9RHOD)

HSP 1 Score: 186 bits (473), Expect = 1.570e-53
Identity = 114/253 (45.06%), Postives = 157/253 (62.06%), Query Frame = 2
Query:  146 EGSTLLEAKRGGTKAPHKCLEIECLEE-SDYWKLEPALDILR---AGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQ-KKPLSLLCNSISTINQYTGGVDKSLFKRLKKALPGPYTLILPATHEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLES-PLLCSSVPHANASDEDEGEDDHTPVRDPVELLT-WKKNPKVDFIVDAGVVEPQPGFTSIGFSTVVDFMGPEPLVIREGLGDPSF 883
            EG+   +A R G K   + L IE   E +D W+LEP  ++LR    G +G++P D+ Y F C++HSR GVE+I+ LKK     +KPLSLLC + STI +YT  +DK  FK L+  LPGPYT ILPATHEVPRV+++++ H+K WKRRE+G+R P +P C  ++  L+   LL SSVP  + S+EDE         DP ++L  W++  +VDFI+ AG        +S   STVVD +     V+REGLG   F
Sbjct:   23 EGNLTSDASRTGKKRETR-LHIEVSGEGNDLWRLEPVFELLRDPSRGAVGILPTDTSYAFVCNLHSRAGVERIYALKKTPPSVRKPLSLLCRNHSTIQRYTTVMDKRTFKVLRSLLPGPYTFILPATHEVPRVMIENRTHRKMWKRREVGIRWPREPHCQAVMDALDGVALLASSVPDID-SEEDEL------AGDPAKILAQWER--QVDFIISAG------SLSSDMKSTVVDVLRGWQ-VLREGLGYKEF 258          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7S0Y1Y4_HEMAN (Threonylcarbamoyl-AMP synthase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y1Y4_HEMAN)

HSP 1 Score: 188 bits (477), Expect = 3.140e-53
Identity = 108/239 (45.19%), Postives = 153/239 (64.02%), Query Frame = 2
Query:  167 AKRGGTKAPHKCLEIECLE-ESDYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQK--KPLSLLCNSISTINQYTGGVD-KSLFKRLKKALPGPYTLILPATHEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPHANASDEDEGEDDHTPVRDPVELLTWKKNPKVDFIVDAGVVEPQPGFTSIGFSTVVDFMGPEPLVIREGLG 871
            AK GGTK+  K + +E  + + D W+LE A+DI++ GGLGV+P DSCY F  D+ SR GV++++ L +   +K  KPL+LLC+SIS I+ YT  V+ K +FK LK  LPGPYT I P+T+E+PRV+L+HK H  TWKR+EIGVR+PD   CL  L+GL++P+L  SVP        E + +  P    + L  W+   ++DF++  G   P+    S   +TVVD    EP ++REG G
Sbjct:  133 AKGGGTKS-RKAIYVEIEDADQDAWRLEQAIDIIKQGGLGVVPTDSCYSFVTDVQSRKGVDRLYALVRLENEKVKKPLALLCHSISQISSYTTAVNFKKVFKMLKATLPGPYTFIFPSTNELPRVILEHKKH--TWKRKEIGVRVPDDDCCLSFLKGLDNPVLVYSVPR-------EAKGEMQPFDPALVLDRWEN--EIDFVIANG---PRTEGMS---TTVVDMTNDEPELLREGEG 353          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7S3Z127_9EUKA (Threonylcarbamoyl-AMP synthase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z127_9EUKA)

HSP 1 Score: 180 bits (457), Expect = 5.480e-51
Identity = 105/252 (41.67%), Postives = 150/252 (59.52%), Query Frame = 2
Query:  134 PPSREGSTLLEAKRGGTKAPHK--CLEIECLEESDYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQ-KKPLSLLCNSISTINQYTGGVD-KSLFKRLKKALPGPYTLILPATHEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPHANASDEDEGEDDHTPVRDPVELLTWKKNPKVDFIVDAGVVEPQPGFTSIGFSTVVDFMGPEPL-VIREGLGD 874
            PP    S     +RG    P       IE   E D+WKL+ A+  ++ GG+ V+P DSCY F  D++S+  V++I+ LK    + KKPLSLLC+SIS I+ +T G+  K+ FK LK  LPGPYT ILPA++++PR++L+HK HKK WKR+EIGVR+P   +C + L+ + +P+LCSSVP    S++         V       TW    +VDFI+D G  + +P       +TVVD    + L V+REG G+
Sbjct:   53 PPLSSSSPARTTRRGLAVTPRAKYAPTIEIEGEWDFWKLDSAVKAVKDGGIVVLPTDSCYAFVADVNSKEAVQRIYALKNIDPETKKPLSLLCHSISQISDFTSGMQSKAAFKILKSTLPGPYTYILPASNKLPRMILEHKEHKKVWKRKEIGVRVPQDSVCQEFLKLMGNPVLCSSVPSDTESNQ-------LAVEGSEIERTWAH--RVDFIIDNGYRQTEP-------TTVVDMTIEDGLKVLREGAGE 288          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7S2TTY3_9EUKA (Threonylcarbamoyl-AMP synthase n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TTY3_9EUKA)

HSP 1 Score: 175 bits (443), Expect = 5.050e-50
Identity = 81/152 (53.29%), Postives = 114/152 (75.00%), Query Frame = 2
Query:  209 IECLEESDYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQ-KKPLSLLCNSISTINQYTGGVD-KSLFKRLKKALPGPYTLILPATHEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVP 658
            IE   E D+WKL+ A+  ++ GG+ V+P DSCY F  D++S+  V++I+ LK    + KKPLSLLC+SIS I+ YT G+  K+ FK LK  LPGPYT ILPA++++PR++L+HK HKK WKR+EIGVR+PD P+C + L+ + +P+LCSSVP
Sbjct:   25 IEVEGEWDFWKLDSAVKAVKEGGIVVLPTDSCYAFVADVNSKEAVQRIYALKNIDPETKKPLSLLCHSISQISDYTSGMQSKAAFKILKSTLPGPYTYILPASNKLPRMILEHKEHKKVWKRKEIGVRVPDDPVCQEFLKLIGNPVLCSSVP 176          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7S2H7I3_9STRA (Threonylcarbamoyl-AMP synthase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H7I3_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.100e-48
Identity = 91/183 (49.73%), Postives = 120/183 (65.57%), Query Frame = 2
Query:  227 SDYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQKKPLSLLCNSISTINQYTGGVDKSLFKRLKKALPGPYTLILPATHEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPHANASDEDEGEDDHTPVRDPVELLTWKKNPKVDFIVDAG 775
            SD W+ + A+ +L AGG GVIP D+ Y F   + SR G+E+I  +K   + KKPLSLLC  ++TI++YT G+DK LFK LKK LPGPYT ILPA+ ++P+++ Q    KK WKR EIGVR+PD PIC  I++ +  PLLCSSV  A   D D   D    +   +E  TW K  KVDF++D G
Sbjct:    4 SDVWRADKAVRLLSAGGCGVIPTDTSYSFVTPVSSREGIERILRIKGAESSKKPLSLLCPDLATIDKYTYGIDKQLFKMLKKNLPGPYTFILPASSDLPKMIYQDG--KKKWKRSEIGVRIPDDPICQAIVEQIGEPLLCSSV--APDIDPDNDSDPAFLLCSAMEGDTWCK--KVDFVIDGG 180          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7S0EEL6_9CRYP (Threonylcarbamoyl-AMP synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EEL6_9CRYP)

HSP 1 Score: 172 bits (435), Expect = 4.850e-48
Identity = 106/276 (38.41%), Postives = 162/276 (58.70%), Query Frame = 2
Query:   86 LLEGTFLTQA--FMTPL--SPPSREG-STLLEAKRGGTKAPHKCLEIECLEESDYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKF-AAQKKPLSLLCNSISTINQYTGGVD-KSLFKRLKKALPGPYTLILPATHEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPHANASDEDEGEDDHTPVRDPVELLTWKKNPKVDFIVDAGVVEPQPGFTSIGFSTVVDFMGPEPLVIREGLGDPSFLVE 892
            LL  TF + +   ++PL  SP  R   S+L  A +   +A    +EIE +     WKL+P   IL+ GGLG++P D+ Y F   I SR GV +++ LK+  + +KKP ++LC+SIS I++YT  ++ KS+FK LK+ LPGPYT I P+T+++PR+++ HK H K WKR+EIGVR+P   +CL+++  + +PLLC+ V   + +DE+     H        +    KN  +DF+V AG    +        ST+VD      +++REG GD   L E
Sbjct:   11 LLLATFTSSSSFLLSPLPPSPTCRPAVSSLSRAAKSRQEAGPVFVEIEDIGHG-AWKLDPVAAILKEGGLGIVPTDTSYAFVTSIESREGVSRLYDLKQQDSIKKKPFAILCDSISQISKYTTAINFKSVFKMLKEVLPGPYTFICPSTNDLPRMIIDHKKHAKIWKRKEIGVRIPKDQVCLELISKVGTPLLCAGV---HKTDEESFSVGH--------VFAENKN-LIDFMVAAGERNAES-------STIVDLTKEPAVILREGAGDIDILQE 266          
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Match: A0A7S2SRN1_9STRA (Threonylcarbamoyl-AMP synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRN1_9STRA)

HSP 1 Score: 172 bits (436), Expect = 8.490e-48
Identity = 99/225 (44.00%), Postives = 139/225 (61.78%), Query Frame = 2
Query:  227 SDYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTLKKFAAQKKPLSLLCNSISTINQYTGGVDKSLFKRLKKALPGPYTLILPATHEVPRVLLQHK-AHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPHANASDEDEGED-----DHTPVRDPVELLTWKKNPKVDFIVDAGVVEPQPGFTSIGFSTVVDFMGPEPLVIREGLGDPSF 883
            SD W+    +D+L++GG+GV+P D  Y F   + SR GVE+I  LK  A  KKPLSLLC  +S I++YT G+D+  FK LK+ LPGP+T ILPA+ E+P+++ Q K   KK WKR EIG+R+P+  + L IL+ L+ PLLCS++P     DED G        H+ +RD  +  +     +VDFI+DAG   P  G      ST+ D     P+++REGLGD + 
Sbjct:   97 SDAWRASKVVDLLQSGGVGVLPTDVSYSFVTPVSSRSGVERILRLKGAAGGKKPLSLLCRDLSEIDKYTYGIDRITFKLLKRNLPGPFTFILPASSELPKMIYQDKRGAKKKWKRSEIGIRVPNDGVLLSILEQLDEPLLCSTLP----VDEDSGAQIVCHVSHS-LRDGADWCS-----QVDFILDAGE-RPVDG------STIYDLTQESPVLVREGLGDTTL 304          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1026.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZP2_9STRA2.080e-7545.28Threonylcarbamoyl-AMP synthase n=1 Tax=Tribonema m... [more]
A0A7S4D661_HETAK2.310e-5743.57Threonylcarbamoyl-AMP synthase n=1 Tax=Heterosigma... [more]
A0A7S0ZI44_9RHOD3.210e-5742.23Threonylcarbamoyl-AMP synthase n=1 Tax=Timspurckia... [more]
A0A7J7IFU6_9RHOD1.570e-5345.06Threonylcarbamoyl-AMP synthase n=1 Tax=Cyanidiococ... [more]
A0A7S0Y1Y4_HEMAN3.140e-5345.19Threonylcarbamoyl-AMP synthase n=2 Tax=Hemiselmis ... [more]
A0A7S3Z127_9EUKA5.480e-5141.67Threonylcarbamoyl-AMP synthase n=1 Tax=Lotharella ... [more]
A0A7S2TTY3_9EUKA5.050e-5053.29Threonylcarbamoyl-AMP synthase n=2 Tax=Lotharella ... [more]
A0A7S2H7I3_9STRA1.100e-4849.73Threonylcarbamoyl-AMP synthase (Fragment) n=1 Tax=... [more]
A0A7S0EEL6_9CRYP4.850e-4838.41Threonylcarbamoyl-AMP synthase n=1 Tax=Hanusia phi... [more]
A0A7S2SRN1_9STRA8.490e-4844.00Threonylcarbamoyl-AMP synthase n=1 Tax=Rhizochromu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1026contigC-australica_Contig_1026:14406..16376 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog55529.EKX50266
PFAMsSua5_yciO_yrdC
Model size1017
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons8
Evalue9.89e-48
EggNOG OGsCOG0009@1|root,KOG3051@2759|Eukaryota
Ec32 ortholog descriptiontranslation factor
Ec32 orthologEc-24_001520.1
DescriptionL-threonylcarbamoyladenylate synthase
Cds size834
COG categoryJ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1026.6.1prot_C-australica_Contig_1026.6.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1026 14467..16254 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586763.0729077-UTR-C-australica_Contig_1026:14405..144661682586763.0729077-UTR-C-australica_Contig_1026:14405..14466Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1026 14406..14466 +
1682586763.1476822-UTR-C-australica_Contig_1026:16254..163761682586763.1476822-UTR-C-australica_Contig_1026:16254..16376Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1026 16255..16376 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586763.0822845-CDS-C-australica_Contig_1026:14466..146451682586763.0822845-CDS-C-australica_Contig_1026:14466..14645Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1026 14467..14645 +
1682586763.0902188-CDS-C-australica_Contig_1026:14709..149031682586763.0902188-CDS-C-australica_Contig_1026:14709..14903Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1026 14710..14903 +
1682586763.0980985-CDS-C-australica_Contig_1026:15055..151381682586763.0980985-CDS-C-australica_Contig_1026:15055..15138Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1026 15056..15138 +
1682586763.1059756-CDS-C-australica_Contig_1026:15283..153991682586763.1059756-CDS-C-australica_Contig_1026:15283..15399Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1026 15284..15399 +
1682586763.1138036-CDS-C-australica_Contig_1026:15620..157111682586763.1138036-CDS-C-australica_Contig_1026:15620..15711Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1026 15621..15711 +
1682586763.1216884-CDS-C-australica_Contig_1026:15851..158911682586763.1216884-CDS-C-australica_Contig_1026:15851..15891Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1026 15852..15891 +
1682586763.1295927-CDS-C-australica_Contig_1026:16047..161171682586763.1295927-CDS-C-australica_Contig_1026:16047..16117Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1026 16048..16117 +
1682586763.1390352-CDS-C-australica_Contig_1026:16193..162541682586763.1390352-CDS-C-australica_Contig_1026:16193..16254Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1026 16194..16254 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1026.6.1

>prot_C-australica_Contig_1026.6.1 ID=prot_C-australica_Contig_1026.6.1|Name=mRNA_C-australica_Contig_1026.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=278bp
MWLWWLVCLLEGTFLTQAFMTPLSPPSREGSTLLEAKRGGTKAPHKCLEI
ECLEESDYWKLEPALDILRAGGLGVIPVDSCYVFACDIHSRGGVEKIFTL
KKFAAQKKPLSLLCNSISTINQYTGGVDKSLFKRLKKALPGPYTLILPAT
HEVPRVLLQHKAHKKTWKRREIGVRMPDQPICLKILQGLESPLLCSSVPH
ANASDEDEGEDDHTPVRDPVELLTWKKNPKVDFIVDAGVVEPQPGFTSIG
FSTVVDFMGPEPLVIREGLGDPSFLVE*
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mRNA from alignment at C-australica_Contig_1026:14406..16376+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1026.6.1 ID=mRNA_C-australica_Contig_1026.6.1|Name=mRNA_C-australica_Contig_1026.6.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1971bp|location=Sequence derived from alignment at C-australica_Contig_1026:14406..16376+ (Chrysoparadoxa australica CS_1217)
GTAGCTTCCCTTAAACCTGGCAACCAAGCCCCCTCGCCCCTCGCCCCAGC CCCTCTCTCCAATGTGGCTGTGGTGGTTGGTGTGCTTACTAGAGGGAACT TTCCTTACACAGGCCTTCATGACACCACTTTCACCACCTTCTCGAGAAGG GAGCACGCTCCTGGAAGCCAAGAGGGGGGGGACAAAGGCTCCACACAAAT GCCTGGAGATTGAGTGCTTGGAGGAGTCAGACTATTGGAAGTAATAATAA ATCACCCTACCTCATGCCTTGGCCTTCTCTTAACCGGAGCTGCTGCTGTG CCAGGCTTGAGCCTGCACTTGATATTCTGCGAGCGGGCGGGCTGGGGGTG ATTCCTGTTGATAGTTGCTACGTGTTTGCTTGTGATATCCATAGCCGGGG TGGTGTCGAGAAGATTTTTACACTAAAAAAGTTCGCAGCGCAGAAGAAGC CGTTGAGTTTGTTGTGCAATTCGATCAGTACAATTAACCAATACACTGGT GAGTTATGGTTGCAGCTGCTGACATCAAAGAAAGCTATCTCTGAACTAGT CCCAGGTCCTGTGCTGCGGGTATGATGGCAAGAAGCTTCGTGCAACACAG ACACTCCCACTCAGGCTTTAACGCTCCTATCTTTCTCTGAATCCTCAAAG GTGGAGTAGACAAGAGCTTGTTCAAGAGATTGAAGAAAGCACTTCCTGGG CCTTACACGCTCATCCTGCCCGCCACTCATGAGGTATATTAAGATGGCCA TTTTCACAGCTCTGCTTTGTTAGCAAAGGGTAGGGTGGTTATGCGCTGTG AGAACAGCAGCAACAAGCATTAGGTGTTTGGAGCGTCAGATCTAGTCACT TTCTCACCCTCCTCTTTCGTGGACTCAGGTCCCTCGTGTGCTGCTTCAAC ACAAGGCACATAAAAAGACGTGGAAGAGGCGGGAAATAGGAGTCAGGATG CCTGACCAACCAATCTGTCTCAAGATATTGCAAGGCCTTGAAAGGTAGGA AGAGGCTTTAGTTGAAGGTGGTGACCGGCTTGGGGTTAGATGGTGAGGGG CGAGGAGGAAGAGAGAATGTGTCTTTCAAGGGAGGCACGCGTTCAACCCC TTTGTGCAGACTTGCGGGCATGACATGACATGGATTGGAGTGAATGAGGC TAAGTCTGATGCCAACTCGCGAGTTTGCTCCACCCTTCTCAACGTTCCTC CCTCCCTCCCTCCAGCCCTCTGTTATGCAGTAGTGTGCCTCACGCGAATG CCAGTGACGAGGATGAGGGGGAGGATGATCACACCCCTGTTCGTGACCCA GTGGAGGTGAGGTACCTTCCCTCGCAGAGAGCAGAGAGAGTCATGGCAGT GACCAAGAGAAGGCTTGCCAACTCAGAACACCCACCTAGGTGCTGTGCAC TATGCTGCTGGACTAACTAGAAATAATCCTGCTGTTCGCGCCTTAGCTGC TCACCTGGAAGAAGAACCCCAAGGTTGACTTTATAGGTAAAAGGATGAAT GCTCTCTCCCTCATGCATGGCGCTCCATCGCTTTCTTTGGTCCCTTCTTG CCGACCCTCTGTACTGTAGAGCAGTGTACCTACCTCAATTGCTGACCTCA TCTACCTACCACATGCCTAATCTCTTCTAGCCCCACCCTTAGTGGATGCA GGAGTAGTGGAACCTCAGCCTGGCTTCACCTCCATAGGTTTCAGTACGGT GGTTGATTTCATGTAAGAGTCATGCAGGAAACACAGGTCACGCAATTATG GACTAAATAGACTCCTATTTCTCTGCCCTGCATGTAAGGGGGCCCGAGCC TCTTGTGATAAGAGAAGGGCTTGGAGATCCTTCCTTTCTGGTGGAGTGAT CGGAAAAAAAACTAAGAAGGCCAAATTAAAGAGAGGAAGAGAGTGAGCTG AAACGAGATCCAATGGAGAAGCCATAAAGGACATCTGCCTTCGGCAGCCA GTTATGGCTACCATACCATCA
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Coding sequence (CDS) from alignment at C-australica_Contig_1026:14406..16376+

>mRNA_C-australica_Contig_1026.6.1 ID=mRNA_C-australica_Contig_1026.6.1|Name=mRNA_C-australica_Contig_1026.6.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=834bp|location=Sequence derived from alignment at C-australica_Contig_1026:14406..16376+ (Chrysoparadoxa australica CS_1217)
ATGTGGCTGTGGTGGTTGGTGTGCTTACTAGAGGGAACTTTCCTTACACA
GGCCTTCATGACACCACTTTCACCACCTTCTCGAGAAGGGAGCACGCTCC
TGGAAGCCAAGAGGGGGGGGACAAAGGCTCCACACAAATGCCTGGAGATT
GAGTGCTTGGAGGAGTCAGACTATTGGAAGCTTGAGCCTGCACTTGATAT
TCTGCGAGCGGGCGGGCTGGGGGTGATTCCTGTTGATAGTTGCTACGTGT
TTGCTTGTGATATCCATAGCCGGGGTGGTGTCGAGAAGATTTTTACACTA
AAAAAGTTCGCAGCGCAGAAGAAGCCGTTGAGTTTGTTGTGCAATTCGAT
CAGTACAATTAACCAATACACTGGTGGAGTAGACAAGAGCTTGTTCAAGA
GATTGAAGAAAGCACTTCCTGGGCCTTACACGCTCATCCTGCCCGCCACT
CATGAGGTCCCTCGTGTGCTGCTTCAACACAAGGCACATAAAAAGACGTG
GAAGAGGCGGGAAATAGGAGTCAGGATGCCTGACCAACCAATCTGTCTCA
AGATATTGCAAGGCCTTGAAAGCCCTCTGTTATGCAGTAGTGTGCCTCAC
GCGAATGCCAGTGACGAGGATGAGGGGGAGGATGATCACACCCCTGTTCG
TGACCCAGTGGAGCTGCTCACCTGGAAGAAGAACCCCAAGGTTGACTTTA
TAGTGGATGCAGGAGTAGTGGAACCTCAGCCTGGCTTCACCTCCATAGGT
TTCAGTACGGTGGTTGATTTCATGGGGCCCGAGCCTCTTGTGATAAGAGA
AGGGCTTGGAGATCCTTCCTTTCTGGTGGAGTGA
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