prot_C-australica_Contig_999.3.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_999.3.1
Unique Nameprot_C-australica_Contig_999.3.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length223
Homology
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: A0A6A5BTV8_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BTV8_NAEFO)

HSP 1 Score: 65.1 bits (157), Expect = 4.980e-9
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    8 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQ 61
            ++   QCYQC+ ++V Q TK  +W C +CGS+QSI KIF +S+  KD+RP+VQQ
Sbjct:    4 EYAVFQCYQCSAFSVNQITKNRKWKCKLCGSQQSIRKIFATSHQPKDLRPIVQQ 57          
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: A0A1Y1I702_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I702_KLENI)

HSP 1 Score: 64.7 bits (156), Expect = 9.640e-9
Identity = 25/55 (45.45%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    8 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQL 62
            +++ V+C+QC+ + V+Q TK N+WSC +C +KQS++K++G S  A D+R L Q L
Sbjct:    3 EYIVVRCFQCSTFQVKQVTKSNKWSCSLCAAKQSVIKVYGVSGKASDLRKLAQDL 57          
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: UPI001CFCE7EF (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFCE7EF)

HSP 1 Score: 62.8 bits (151), Expect = 2.710e-8
Identity = 26/54 (48.15%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    8 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQ 61
            ++   QCYQC+ ++V Q TK  +W C +CGS+QSI K++ +S+  KD+RP+VQQ
Sbjct:    4 EYAVFQCYQCSAFSVNQITKNRKWKCKLCGSQQSIRKMYATSHQPKDLRPIVQQ 57          
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: D2VMC5_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VMC5_NAEGR)

HSP 1 Score: 62.0 bits (149), Expect = 4.880e-8
Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:   13 QCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQL 62
            QC+ C  +++ Q TK  +W C +CGS+QSI K+F +SN  KD+RP+VQ+L
Sbjct:    8 QCFNCTAFSINQVTKNRKWKCKLCGSQQSIRKVFANSNQPKDLRPIVQEL 57          
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: A0A1Y2C0C8_9FUNG (SP-RING-type domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0C8_9FUNG)

HSP 1 Score: 61.2 bits (147), Expect = 6.840e-8
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    9 FLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQL 62
            F  V+C+QC+ + VQQ+ K N+W C +CGSKQS+ K++  S+ A D R  VQ+L
Sbjct:    4 FQVVRCFQCSAFVVQQEKKSNKWQCTLCGSKQSVTKVYFESHVAGDTRAAVQEL 57          
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: D8LE90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE90_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.200e-7
Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    9 FLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQLAAGSAG 68
            FLA++C+ C  + V Q+TK  +W C MCG  QSIVK++G    AKD+R LV  L A + G
Sbjct:    8 FLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGG 67          
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: UPI000644E7BC (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E7BC)

HSP 1 Score: 57.4 bits (137), Expect = 3.990e-6
Identity = 24/54 (44.44%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    8 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQ 61
            +++ +QCY C+ + V+Q+TK N ++C +C  KQSI++I+G S  AKD+R LV++
Sbjct:    4 EYILIQCYSCSMFQVKQKTKVNSFTCVICHEKQSIMRIYGISYQAKDLRDLVKK 57          
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: UPI0003F05D4A (uncharacterized protein LOC102801830 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F05D4A)

HSP 1 Score: 53.9 bits (128), Expect = 7.390e-5
Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    8 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQL 62
            +F+ V+C+ C  + VQQ  K  +W+C MCGSKQS+ KI+G  + A D R  VQ+L
Sbjct:  312 EFIVVKCFSCTVFQVQQVKKAKKWNCKMCGSKQSLKKIYGQGSGA-DCRKHVQKL 365          
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match: A0A0G4HW06_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HW06_9ALVE)

HSP 1 Score: 53.5 bits (127), Expect = 8.230e-5
Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    8 KFLAVQCY--QCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQ 61
            +F+AV+C    C  ++V Q TK  Q+ C MC  KQS++K++ SS+SA D+RPLVQ+
Sbjct:    3 EFIAVKCAGASCGIFSVTQLTKARQFVCSMCRLKQSVMKVYQSSSSAADLRPLVQE 58          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6A5BTV8_NAEFO4.980e-951.85Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
A0A1Y1I702_KLENI9.640e-945.45Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
UPI001CFCE7EF2.710e-848.15uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
D2VMC5_NAEGR4.880e-850.00Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
A0A1Y2C0C8_9FUNG6.840e-848.15SP-RING-type domain-containing protein n=1 Tax=Rhi... [more]
D8LE90_ECTSI2.200e-748.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000644E7BC3.990e-644.44hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
UPI0003F05D4A7.390e-547.27uncharacterized protein LOC102801830 n=1 Tax=Sacco... [more]
A0A0G4HW06_9ALVE8.230e-548.21Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032739MRN complex-interacting proteinPFAMPF15749MRNIPcoord: 12..64
e-value: 6.1E-17
score: 62.3
IPR032739MRN complex-interacting proteinPANTHERPTHR15863MRN COMPLEX-INTERACTING PROTEINcoord: 8..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_999contigC-australica_Contig_999:2046..2779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_999.3.1mRNA_C-australica_Contig_999.3.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_999 1894..2842 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_999.3.1 ID=prot_C-australica_Contig_999.3.1|Name=mRNA_C-australica_Contig_999.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=223bp
MWQMSQGKFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSN
SAKDIRPLVQQLAAGSAGPACAWRYASDGIIGGQKRGREDAYMANLSEQK
RQRAVIMQDRGDNSMIQSSDGAANMGAMMETGDLGQAYMSQASWSLRNNQ
DLGHRREGAIVGGSMLHFWDSKLVPSAAPPTPASTPQWAHRSLADKMDQM
DEVAPMMDGGSVTSRWDKYMSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032739MRNIP