mRNA_C-australica_Contig_996.2.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Match: A0A836C894_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C894_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.010e-16 Identity = 135/442 (30.54%), Postives = 190/442 (42.99%), Query Frame = 1
Query: 88 ARLELIEPATSSYVPETIHL-VDDRTIIGRSKSKSDVVLDLDISRT--------QTNTISRQHAE--FTRETRNGRCVFVVHDLKSTNGVFVNDVKIEEEELQDLDLVQFGGAAGVPTGTSFSTTVGGRGDQVHKFAQYRFKLVGE-------------NGQEAESSRKRKRMNEAKTAATRAASS---------PGPYSSLDAAVAEVLESKTKRKLCPSSPSAV--LPDNVPALVEEMERKDGRICTLHRLNGQLQEELHRAKQEKIEARNKLEWQSDERERLQKEVRMLQGYKAGLGKVMADSLSAKRASGSQQSTTSNQAIQTEEATAQESNQAVVAKN--------KNLFADVSCSICHDILLEAAILPCSHGYCSSCWGA---SSASACLICEAECQDV--KPVHSMHLDNAIAILVAELGGKELQKKWERRLQRA 1269
A LEL+ S P+ I L R ++GR+ + SDVVL+ ++ T N ISR HAE F + + R FV DL S NGVFVND+K+ EL D D+VQ GGAA +P G F G R QYRF + NG + RKR M+ +++ SS +SS D E + +K +P + LP PA+ ++ E + QL EL AK ++ L ++D R R + + + K+ D S Q Q + A L A+V+C +C + LL+AA+LPCSH C +CW A + ++AC +C + + SMHLDN IA+LVAELGG E Q++ E R Q A
Sbjct: 14 AVLELVSQGLSQN-PQRIELGAKTRIVLGRAWT-SDVVLN--VANTGPDAEGPPSANIISRSHAEICFIVDEQQRRRWFV-KDLNSVNGVFVNDIKVHSNELFDGDIVQLGGAAMMPVGARF---FGNRAA-----IQYRFSTIAAPPXXXXXXXXXXANG----AKRKRAPMSGSQSPEVTGHSSLHELSASRRKTSHSSSDGLPWEPVGAKEADTGDDGAPGSTEPLPQATPAVTQQSEAQQ------RAREQQLAMELA-AKTAEVAQLQALVAEADARARSAQTAQQNAEAAFTMMKLAGDRASPPPPKQPQLRDAQVQTAVCDSAXXXXXXXXXXXXXXXLKHRLASQLLAEVACCLCEETLLDAALLPCSHAVCGACWTAHCDAHSTACPVCTRKFHSAERRARRSMHLDNVIALLVAELGGAEAQRRMEERAQAA 431
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Match: D7G7R3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7R3_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 3.670e-16 Identity = 60/137 (43.80%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 88 ARLELIEPATSSYVPETIHLVDDRTIIGRSKSKSDVVLDLDISRTQTNTISRQHAE-FTRETRNGRCVFVVHDLKSTNGVFVNDVKIEEEELQDLDLVQFGGAAGVPTGTSFSTTVGGRGDQVHKFAQYRF--KLVG 489
A+L L+ VPE I L + T++GRS DV LD T TISR+HAE F + + G + + DL STNGVFVN+ K++E+ L+ D+VQFGGAA +P GT F GG G ++ +YRF KL G
Sbjct: 6 AKLVLVASTEDYNVPEIIQLSRESTVLGRSSKTCDVTLDA----APTKTISRKHAEIFCGKGKRGPKTYTLRDLGSTNGVFVNEFKVQEQRLRHGDVVQFGGAADIPVGTRF----GGTGSRI----RYRFEHKLAG 130
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Match: A0A6H5KYS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYS2_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.910e-12 Identity = 47/101 (46.53%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 154 DRTIIGRSKSKSDVVLDLDISRTQTNTISRQHAE-FTRETRNGRCVFVVHDLKSTNGVFVNDVKIEEEELQDLDLVQFGGAAGVPTGTSFSTTVGGRGDQV 453
+ T++GRS DV LD T TISR+HAE F R G + + DL STNGVFVN+ K++E+ L+ D+VQFGGAA +P GT F GG G ++
Sbjct: 43 ESTVLGRSSRTCDVTLDA----APTKTISRKHAEIFCGNGRRGPKTYTLRDLGSTNGVFVNEFKVQEQRLRHGDVVQFGGAADIPVGTRF----GGTGSRI 135
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Match: A0A7S2TQR2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TQR2_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 9.220e-9 Identity = 45/109 (41.28%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 163 IIGRSKSKSDVVLDLDISRTQTNTISRQHAEFTRETRNGRCVFVVHDLKSTNGVFVNDVKIEEEELQDLDLVQFGGAAGVPTGTSFSTTVGGRGDQVHKFAQYRFKLVG 489
IIGR ++D +LD S+ N ISR+HA E +NG+ +V+ D +STNGVFVN+++++++EL D D++ FGG +GVP VGG +Q+ +RF+L G
Sbjct: 47 IIGRDP-EADYILD---SKRFKNMISRRHAAIKLE-KNGK--WVILDTRSTNGVFVNNIRVQKKELADNDIIVFGGGSGVP--------VGGSREQLDSEFLFRFELHG 140
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Match: A0A7J6MBZ4_PEROL (FHA domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MBZ4_PEROL) HSP 1 Score: 58.2 bits (139), Expect = 8.720e-6 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 85 EARLELIEPATSSY-VPETIHLVDDRTIIGRSKSKSDVVLDLDISRTQTNTISRQHAEFTRETRNGRCVFVVHDLKSTNGVFVNDVKI-EEEELQDLDLVQFG 387
EA L L+ + VP +HL +R IGR+ +SDV LD S T+SR+HA R G C FV+ DL+S NGV+VN + EE+EL D+V FG
Sbjct: 139 EAHLVLLSSCRPTMDVPHVVHLGRERCFIGRAV-ESDVYLD---SVLYPRTLSREHAVIERR---GPCDFVLKDLRSVNGVYVNGKAVREEQELAPGDVVLFG 234
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Match: A0A7J6LZB3_PEROL (FHA domain-containing protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LZB3_PEROL) HSP 1 Score: 58.2 bits (139), Expect = 2.040e-5 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 85 EARLELIEPATSSY-VPETIHLVDDRTIIGRSKSKSDVVLDLDISRTQTNTISRQHAEFTRETRNGRCVFVVHDLKSTNGVFVNDVKI-EEEELQDLDLVQFG 387
EA L L+ + VP +HL +R IGR+ +SDV LD S T+SR+HA R G C FV+ DL+S NGV+VN + EE+EL D+V FG
Sbjct: 265 EAHLVLLSSCRPTMDVPHVVHLGRERCFIGRAV-ESDVYLD---SVLYPRTLSREHAVIERR---GPCDFVLKDLRSVNGVYVNGKAVREEQELAPGDVVLFG 360
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Match: A0A7J6RTD3_PEROL (FHA domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RTD3_PEROL) HSP 1 Score: 57.0 bits (136), Expect = 4.740e-5 Identity = 43/103 (41.75%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 85 EARLELIEPATSSY-VPETIHLVDDRTIIGRSKSKSDVVLDLDISRTQTNTISRQHAEFTRETRNGRCVFVVHDLKSTNGVFVNDVKI-EEEELQDLDLVQFG 387
EA L L+ + VP +HL +R IGR+ +SDV LD S T+SR+HA R G C FV+ DL+S NGV+VN + +E+EL D+V FG
Sbjct: 265 EAHLVLLSSCRPTMDVPHVVHLGRERCFIGRAV-ESDVYLD---SVLYPRTLSREHAVIERR---GPCDFVLKDLRSVNGVYVNGKAVRDEQELAPGDVVLFG 360
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Match: A0A7J6PEY5_PEROL (FHA domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6PEY5_PEROL) HSP 1 Score: 57.4 bits (137), Expect = 6.030e-5 Identity = 40/88 (45.45%), Postives = 52/88 (59.09%), Query Frame = 1
Query: 127 VPETIHLVDDRTIIGRSKSKSDVVLDLDISRTQTNTISRQHAEFTRETRNGRCVFVVHDLKSTNGVFVNDVKI-EEEELQDLDLVQFG 387
VP +HL +R IGR+ +SDV LD S T+SR+HA R G C FV+ DL+S NGV+VN + EE+EL D+V FG
Sbjct: 3 VPHVVHLGRERCFIGRAV-ESDVYLD---SVLYPRTLSREHAVIERR---GPCDFVLKDLRSVNGVYVNGKAVREEQELAPGDVVLFG 83 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_996.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_996.2.1 >prot_C-australica_Contig_996.2.1 ID=prot_C-australica_Contig_996.2.1|Name=mRNA_C-australica_Contig_996.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=498bp LFPFRISASRINVVTHHPSTLRLNPPMLEARLELIEPATSSYVPETIHLVback to top mRNA from alignment at C-australica_Contig_996:2876..5561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_996.2.1 ID=mRNA_C-australica_Contig_996.2.1|Name=mRNA_C-australica_Contig_996.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2686bp|location=Sequence derived from alignment at C-australica_Contig_996:2876..5561- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_996:2876..5561- >mRNA_C-australica_Contig_996.2.1 ID=mRNA_C-australica_Contig_996.2.1|Name=mRNA_C-australica_Contig_996.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1494bp|location=Sequence derived from alignment at C-australica_Contig_996:2876..5561- (Chrysoparadoxa australica CS_1217)back to top |