mRNA_C-australica_Contig_9903.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9903.1.1
Unique NamemRNA_C-australica_Contig_9903.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: A0A8J4PRG1_9MYCE (FSH1 domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PRG1_9MYCE)

HSP 1 Score: 77.4 bits (189), Expect = 7.050e-15
Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 1
Query:    4 KKHRVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVHHNNESRGEPGESGETRTWWVRDEDGEWQWHANGLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            KK R+LC+HG +Q+G +FK +   LR  +  I D  YIDAPH+   +ES+G       T +WW   +DG+      G + ++D L++ +  +GPF G++ FS G
Sbjct:   14 KKLRILCLHGYKQNGTIFKSKTAVLRKSMKDIADFVYIDAPHI--VDESKG-------TASWWRASKDGK---EYRGWETTIDYLRKVFINQGPFDGILGFSQG 105          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: A0A152A0J0_9MYCE (DUF341 family protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A0J0_9MYCE)

HSP 1 Score: 73.9 bits (180), Expect = 1.540e-13
Identity = 38/104 (36.54%), Postives = 58/104 (55.77%), Query Frame = 1
Query:    4 KKHRVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVHHNNESRGEPGESGETRTWWVRDEDGEWQWHANGLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            KK R+LC+HG +Q+G +FK +   LR  +  I +  YIDAPH+   +E  G       T +WW   +DG+      G + +LD L+E +  +GP  G++ FS G
Sbjct:   20 KKLRILCLHGYKQNGTIFKSKTAVLRKSMKDIAEFIYIDAPHI--VDEKNG-------TSSWWRASKDGK---EYRGWEVTLDYLREVFITQGPIDGVLGFSQG 111          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: A0A7R9EU54_9NEOP (Hypothetical protein n=1 Tax=Timema bartmani TaxID=61472 RepID=A0A7R9EU54_9NEOP)

HSP 1 Score: 71.2 bits (173), Expect = 2.010e-13
Identity = 36/111 (32.43%), Postives = 59/111 (53.15%), Query Frame = 1
Query:    1 MKKHRVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPH-VHHNNESRGEPGESGETRTWWVRDEDGEWQWHAN-----GLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            +KK ++LC+HG RQ+G +FK +L   R  L    +  + DAPH + H + +     ++ E   WW  +ED  +          G ++SL  +++  + EGPF GL+ FS G
Sbjct:   24 VKKSKILCVHGYRQNGNVFKSKLGGFRKSLKKYAEFVFFDAPHTIRHQDNTEVSEADTPEQYGWWFSEEDRTFMSKKPSDTCIGFEESLARVEDLCEKEGPFDGLLGFSQG 134          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: A0A5B8MKB3_9CHLO (Hypothetical protein n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MKB3_9CHLO)

HSP 1 Score: 72.4 bits (176), Expect = 3.820e-13
Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 1
Query:    4 KKHRVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVH----HNNESRGEPGESGETRT---WWVRDEDG--EWQWHANGLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            +K RVL +HG  Q+ E+F+ R   LR  L   CDL ++DAPH        NE +   G+ GE ++   WW+  E G       A G ++SL LL+E  + +GPF G++ FS G
Sbjct:   11 RKLRVLALHGYLQNAEVFRSRTGALRKALKKHCDLVFLDAPHEIKVDLQGNEIKSCGGKEGEDQSYYGWWIASEGGPPRESKSAEGWERSLGLLEEALERDGPFDGVLGFSMG 123          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: A0A1B0EWX8_PHLPP (FSH1 domain-containing protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0EWX8_PHLPP)

HSP 1 Score: 72.0 bits (175), Expect = 5.780e-13
Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 1
Query:   13 RVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVHHNNESRGEPGESGETRTWWVRDEDGEWQWHANG-----LDKSLDLLKETWQVEGPFQGLIAFSSGG 318
            RVLCIHG RQ+   F+ ++   R  +    +  +I APH         + G +   ++WW    DG ++    G      ++SL L++ETW+ +GPFQGL+ FS GG
Sbjct:   25 RVLCIHGYRQNEFSFRSKIGSFRKYVDKYAEFVFISAPHQAPPFPGEEDKGLNENQKSWWFNKPDGHFRGIYKGGPVVGFEESLRLVEETWEKQGPFQGLLGFSQGG 131          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: A0A835YKB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.050e-12
Identity = 38/101 (37.62%), Postives = 53/101 (52.48%), Query Frame = 1
Query:   13 RVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVHHNNESRGEPGESGETRTWWVRDEDGEWQWHANGLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            +VLC+HG+RQ+ E+F+HRLR+L+ K        YIDAPH     E      +   TR WW+R           G+D SL  +   W   GPF  ++ FS+G
Sbjct:    2 KVLCLHGARQTSEVFRHRLRKLQHKAPREVQFVYIDAPH-----ELPISQHDDVATRHWWLRQGSA-----YTGMDASLAAIDTAWAQHGPFDMILGFSAG 92          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: D3B5P9_POLPP (DUF341 family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B5P9_POLPP)

HSP 1 Score: 71.2 bits (173), Expect = 1.290e-12
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   13 RVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVHHNNESRGEPGESGETRTWWVRDEDGEWQWHANGLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            R+LC+HG +Q+G +FK +   LR  L  I +  Y+DAPHV   +E++G       T +WW    DG+      G +++LD L+  +  +GPF G++ FS G
Sbjct:   27 RILCLHGYKQNGTVFKSKTAVLRKSLDDIAEFVYVDAPHV--IDETKG-------TSSWWRVSGDGK---EYKGWEQTLDYLRNIFIKKGPFDGIMGFSQG 115          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: Q55D01_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55D01_DICDI)

HSP 1 Score: 71.6 bits (174), Expect = 1.400e-12
Identity = 35/101 (34.65%), Postives = 58/101 (57.43%), Query Frame = 1
Query:   13 RVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVHHNNESRGEPGESGETRTWWVRDEDGEWQWHANGLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            R+LC+HG +Q+   F+ +   LR  L  I +  Y+DAPH+   +ES+G       + +WW   +DG+      G +++LD L+  ++ +GPF G+I FS G
Sbjct:   13 RILCLHGYKQNAVAFRSKTAVLRKSLKDIAEFIYVDAPHM--VDESKG-------SSSWWRASKDGK---EYRGWEQTLDYLRNVFETQGPFDGVIGFSQG 101          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: A0A0X3QBT4_SCHSO (Ovarian cancer-associated gene 2 protein homolog n=2 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A0X3QBT4_SCHSO)

HSP 1 Score: 67.8 bits (164), Expect = 4.440e-12
Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 1
Query:   13 RVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVHHNNESRGEPGESGETRTWWVRDEDGEWQWHAN-----GLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            R+LCIHG RQ+G +F+ +    R    + C+  +IDAP          + G++ +   WW   ED  ++   N     G DKS+  +KE  + +GPF G+ AFS G
Sbjct:    4 RILCIHGYRQTGSIFREKSGAFRKIFKNSCEFVFIDAPLT------IPDVGDNVQGLGWWFSREDNTFKAQENTDYLCGFDKSVSTVKEALRSQGPFDGIFAFSQG 103          
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Match: A0A7R9ET62_9NEOP (Hypothetical protein n=2 Tax=Timema TaxID=61471 RepID=A0A7R9ET62_9NEOP)

HSP 1 Score: 67.8 bits (164), Expect = 7.360e-12
Identity = 34/106 (32.08%), Postives = 55/106 (51.89%), Query Frame = 1
Query:   16 VLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPH-VHHNNESRGEPGESGETRTWWVRDEDGEWQWHAN-----GLDKSLDLLKETWQVEGPFQGLIAFSSG 315
            +LC+HG RQ+G +FK +L   R  L    +  + DAPH + H + +     ++ E   WW  +ED  +          G ++SL  +++  + EGPF GL+ FS G
Sbjct:   54 ILCVHGYRQNGNVFKSKLGGFRKSLKKYAEFVFFDAPHTIRHQDNTEVSEADTPEQYGWWFSEEDRTFMSKKPSDTCIGFEESLARVEDLCEKEGPFDGLLGFSQG 159          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9903.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4PRG1_9MYCE7.050e-1537.50FSH1 domain-containing protein n=1 Tax=Polysphondy... [more]
A0A152A0J0_9MYCE1.540e-1336.54DUF341 family protein n=1 Tax=Tieghemostelium lact... [more]
A0A7R9EU54_9NEOP2.010e-1332.43Hypothetical protein n=1 Tax=Timema bartmani TaxID... [more]
A0A5B8MKB3_9CHLO3.820e-1338.05Hypothetical protein n=2 Tax=Chloropicon primus Ta... [more]
A0A1B0EWX8_PHLPP5.780e-1334.58FSH1 domain-containing protein n=1 Tax=Phlebotomus... [more]
A0A835YKB1_9STRA1.050e-1237.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D3B5P9_POLPP1.290e-1236.63DUF341 family protein n=1 Tax=Polysphondylium pall... [more]
Q55D01_DICDI1.400e-1234.65Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
A0A0X3QBT4_SCHSO4.440e-1233.96Ovarian cancer-associated gene 2 protein homolog n... [more]
A0A7R9ET62_9NEOP7.360e-1232.08Hypothetical protein n=2 Tax=Timema TaxID=61471 Re... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9903contigC-australica_Contig_9903:268..704 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7217.FBpp0119872
Preferred nameOVCA2
PFAMsFSH1
Model size324
Max annot lvl33208|Metazoa
KEGG rclassRC00021,RC03180
KEGG koko:K07561
KEGG ReactionR10455
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0008150,GO:0010033,GO:0016787,GO:0032526,GO:0033993,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0050896,GO:1901700
Exons3
Evalue1.05e-18
EggNOG OGsKOG2551@1|root,KOG2551@2759|Eukaryota,39X34@33154|Opisthokonta,3BM9A@33208|Metazoa,3D30H@33213|Bilateria,42047@6656|Arthropoda,3SMQU@50557|Insecta,451FF@7147|Diptera,45NBP@7214|Drosophilidae
EC2.5.1.108
DescriptionSerine hydrolase (FSH1)
Cds size324
COG categoryE
BRITEko00000,ko01000,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588859.3857737-CDS-C-australica_Contig_9903:267..3131682588859.3857737-CDS-C-australica_Contig_9903:267..313Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9903 268..313 +
1682588859.3959954-CDS-C-australica_Contig_9903:373..5471682588859.3959954-CDS-C-australica_Contig_9903:373..547Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9903 374..547 +
1682588859.4043868-CDS-C-australica_Contig_9903:600..7041682588859.4043868-CDS-C-australica_Contig_9903:600..704Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9903 601..704 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9903.1.1prot_C-australica_Contig_9903.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9903 268..704 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9903.1.1

>prot_C-australica_Contig_9903.1.1 ID=prot_C-australica_Contig_9903.1.1|Name=mRNA_C-australica_Contig_9903.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=108bp
MKKHRVLCIHGSRQSGELFKHRLRRLRPKLAHICDLRYIDAPHVHHNNES
RGEPGESGETRTWWVRDEDGEWQWHANGLDKSLDLLKETWQVEGPFQGLI
AFSSGGK*
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mRNA from alignment at C-australica_Contig_9903:268..704+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9903.1.1 ID=mRNA_C-australica_Contig_9903.1.1|Name=mRNA_C-australica_Contig_9903.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=437bp|location=Sequence derived from alignment at C-australica_Contig_9903:268..704+ (Chrysoparadoxa australica CS_1217)
ATGAAGAAGCATCGGGTGCTGTGCATTCATGGGTCTCGTCAATCAGGTAG CCATTCCCTCCCTTCGCGGCCCTTCTTTCGCTTCCTTACACTCCCTCCGC CCTTAGGCGAGCTCTTCAAGCACCGACTACGCCGGCTGCGCCCTAAACTG GCCCACATCTGTGACCTTCGATATATTGACGCTCCTCATGTTCACCACAA CAATGAGAGCAGAGGGGAACCTGGGGAGTCTGGGGAAACACGGACTTGGT GGGTGAGGGATGAGGATGGTGAGTGGCAATGTGAAATAGCCAACCCTTCT ACCATGGTGCTGAACCAAAGAAATGAACTCCAGGGCATGCCAATGGACTA GATAAGAGCCTTGACCTCCTCAAAGAGACCTGGCAAGTTGAAGGCCCTTT CCAAGGGCTCATTGCCTTCAGTTCAGGGGGTAAGTAA
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Coding sequence (CDS) from alignment at C-australica_Contig_9903:268..704+

>mRNA_C-australica_Contig_9903.1.1 ID=mRNA_C-australica_Contig_9903.1.1|Name=mRNA_C-australica_Contig_9903.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=324bp|location=Sequence derived from alignment at C-australica_Contig_9903:268..704+ (Chrysoparadoxa australica CS_1217)
ATGAAGAAGCATCGGGTGCTGTGCATTCATGGGTCTCGTCAATCAGGCGA
GCTCTTCAAGCACCGACTACGCCGGCTGCGCCCTAAACTGGCCCACATCT
GTGACCTTCGATATATTGACGCTCCTCATGTTCACCACAACAATGAGAGC
AGAGGGGAACCTGGGGAGTCTGGGGAAACACGGACTTGGTGGGTGAGGGA
TGAGGATGGTGAGTGGCAATGGCATGCCAATGGACTAGATAAGAGCCTTG
ACCTCCTCAAAGAGACCTGGCAAGTTGAAGGCCCTTTCCAAGGGCTCATT
GCCTTCAGTTCAGGGGGTAAGTAA
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