prot_C-australica_Contig_989.7.2 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_989.7.2
Unique Nameprot_C-australica_Contig_989.7.2
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length496
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_989.7.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 332..446
e-value: 1.7E-32
score: 114.3
coord: 249..331
e-value: 1.7E-20
score: 75.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 81..243
e-value: 1.5E-19
score: 72.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 175..226
e-value: 8.4E-7
score: 29.0
coord: 237..295
e-value: 4.4E-12
score: 45.9
coord: 306..363
e-value: 1.3E-5
score: 25.1
coord: 374..429
e-value: 5.7E-13
score: 48.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 354..384
e-value: 3.7E-7
score: 27.9
coord: 387..420
e-value: 6.2E-10
score: 36.6
coord: 286..318
e-value: 5.0E-4
score: 18.1
coord: 215..247
e-value: 3.1E-8
score: 31.3
coord: 250..283
e-value: 3.0E-4
score: 18.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 385..419
score: 11.608074
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..247
score: 12.408249
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 283..317
score: 9.339086
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 248..282
score: 11.060009
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 350..384
score: 11.947875
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..56
NoneNo IPR availablePANTHERPTHR47939MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKEcoord: 155..451
coord: 95..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_989contigC-australica_Contig_989:15034..17576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_989.7.2mRNA_C-australica_Contig_989.7.2Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_989 14924..17598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_989.7.2 ID=prot_C-australica_Contig_989.7.2|Name=mRNA_C-australica_Contig_989.7.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=496bp
MFLISRSKAYARSLVWRSLARAFTTPQLEQSRAGSDQSSLSSHAAYPAST
TGPLDPQERTGLKRGRGASRPALGWTNSRDQRPKWRAQRDLMREIQRLGK
ARRWREVIPMMIRAQERGLELNISVYNAAIAVMNRNNQWREAYKLTAVMH
PDSKKRATTAIHILEALQAHGSPCLQPDLHTYSCLITLSGIAWKLPHALE
LLAMLKESELQPSQVIYNSLIRACGETNSPDMALEFFHEMLQEGIRPCKV
TYGSLLHAYGRQGGAAKAQQLFDGMQQHGLSPNMVHYNSLIMAYGVADLA
SKAVAVYHDLVATGFVPSSHTYTNLLHACSAPSGSWELAVQFFNEIDKPT
LTHYNALIDACGKDGQIELAHKKLKEMKRKGVQPCVVSYSAVIACYVKAG
CMKEAKEVLKDMQADGISPNYVTYNTLMEPVVAACDWKEARRMYLELLSF
GEWTHWSSVKYDYLDLHHCNKGLALAAVRYVLKEMLREGQWLSLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat