prot_C-australica_Contig_9887.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_9887.1.1
Unique Nameprot_C-australica_Contig_9887.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length99
Homology
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BLAST of mRNA_C-australica_Contig_9887.1.1 vs. uniprot
Match: A0A222E8Y6_9RHOB (Uncharacterized protein n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E8Y6_9RHOB)

HSP 1 Score: 188 bits (477), Expect = 1.510e-53
Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 0 
Query:    1 TPPPEAGLHRCTDAKGWDQILRVCRAALASRDWEDNDAAALHNAVGAAFFATGDAFAAHEAFQSALSLRPDTPVLLENRALALDALGQHADAALEMRAA 99
            TPPP+AGLHRCTDAKGWDQILRVCRAALASRDWEDNDAAAL NA+GAAFFATGDAFAAHEAFQ+ALSLRP+TPVLLENRALALDALGQHADAALEMRAA
Sbjct:  268 TPPPQAGLHRCTDAKGWDQILRVCRAALASRDWEDNDAAALQNAIGAAFFATGDAFAAHEAFQAALSLRPETPVLLENRALALDALGQHADAALEMRAA 366
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BLAST of mRNA_C-australica_Contig_9887.1.1 vs. uniprot
Match: A0A239B6G8_9RHOB (Uncharacterized protein n=1 Tax=Antarctobacter heliothermus TaxID=74033 RepID=A0A239B6G8_9RHOB)

HSP 1 Score: 166 bits (421), Expect = 7.180e-46
Identity = 84/97 (86.60%), Postives = 90/97 (92.78%), Query Frame = 0 
Query:    3 PPEAGLHRCTDAKGWDQILRVCRAALASRDWEDNDAAALHNAVGAAFFATGDAFAAHEAFQSALSLRPDTPVLLENRALALDALGQHADAALEMRAA 99
            PP+ G  RCTDA GWDQILRVCRAALA+RDW DN+AAAL NA+GAAF ATGDAFAAHEAFQ+AL+LRPDTPVLLENRALALDALGQHADAALEMRAA
Sbjct:  251 PPQDGSQRCTDADGWDQILRVCRAALAARDWGDNEAAALQNAIGAAFLATGDAFAAHEAFQAALALRPDTPVLLENRALALDALGQHADAALEMRAA 347
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9887.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A222E8Y6_9RHOB1.510e-5394.95Uncharacterized protein n=3 Tax=Roseobacteraceae T... [more]
A0A239B6G8_9RHOB7.180e-4686.60Uncharacterized protein n=1 Tax=Antarctobacter hel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 9..99
e-value: 1.2E-9
score: 40.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 18..93
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 39..72
score: 9.4994

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9887contigC-australica_Contig_9887:556..852 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9887.1.1mRNA_C-australica_Contig_9887.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_9887 556..852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_9887.1.1 ID=prot_C-australica_Contig_9887.1.1|Name=mRNA_C-australica_Contig_9887.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=99bp
TPPPEAGLHRCTDAKGWDQILRVCRAALASRDWEDNDAAALHNAVGAAFF
ATGDAFAAHEAFQSALSLRPDTPVLLENRALALDALGQHADAALEMRAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat