prot_C-australica_Contig_986.7.3 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_986.7.3
Unique Nameprot_C-australica_Contig_986.7.3
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length329
Homology
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BLAST of mRNA_C-australica_Contig_986.7.3 vs. uniprot
Match: A0A835YWQ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWQ2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 8.630e-9
Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 0 
Query:    2 ELSDYSESLKKRYTAAMVRLEGNLADLEIEFSRMEKEYIDARAAWQCKEDRYETGKQMYLNRSLLLQEELAKARDIRKDLKEENEKLREEVKDL 95
            +LS Y+E+L+KRYT  MVRLE N+ADLEIE   +E ++   R  W   E   +  ++ Y  RS LL+ E+ KAR    D  E NE+L  E + L
Sbjct:  180 DLSRYNEALRKRYTDQMVRLEANVADLEIELRALEADHARGRRTWAATEQSLKAEREKYRVRSTLLEAEVVKARQQLDDATELNERLTAENRQL 273
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_986.7.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YWQ2_9STRA8.630e-943.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..45
NoneNo IPR availableCOILSCoilCoilcoord: 169..189
NoneNo IPR availableCOILSCoilCoilcoord: 233..267
NoneNo IPR availableCOILSCoilCoilcoord: 64..105
NoneNo IPR availableCOILSCoilCoilcoord: 208..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_986contigC-australica_Contig_986:15489..17232 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_986.7.3mRNA_C-australica_Contig_986.7.3Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_986 15457..17832 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_986.7.3 ID=prot_C-australica_Contig_986.7.3|Name=mRNA_C-australica_Contig_986.7.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=329bp
MELSDYSESLKKRYTAAMVRLEGNLADLEIEFSRMEKEYIDARAAWQCKE
DRYETGKQMYLNRSLLLQEELAKARDIRKDLKEENEKLREEVKDLLKAEV
ELKALVSKAGAGQGASPSSASAVVEVEVVDQAGGGSKAADSSALESDSFK
ADPQKGALDEVEEQYKGVVASMQQRLDSEIQKCAALERDGTRARRKLFSM
QSECDDMADQWDQDVAQLKDLMKRQAEQFGLESEGLSAELAAAVEANESL
KKELKELRLALEGSRATRNELKLLQQGDTDQRILQKQKQKHGGKRKIKKG
FRKVQVESVLSSVIELALPQSIPNPFAG*
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