mRNA_C-australica_Contig_983.11.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_983.11.1
Unique NamemRNA_C-australica_Contig_983.11.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: A0A835YV61_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV61_9STRA)

HSP 1 Score: 348 bits (892), Expect = 4.240e-114
Identity = 183/292 (62.67%), Postives = 222/292 (76.03%), Query Frame = 1
Query:   16 FLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMT--LATLNIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
             +E  G+G+A DIK +AP   SD TDGLNIKTLSA  FLFFAC+APAVAFG LMGV TAGQIG+IEM+ ATAGCG+ Y+LT+GQP+TIIGSTGPVLAFTAVLYK AVR+ LPFLPLY+WVGLW++ +LA+ S FS+SN++ YFTRFTDEIF  LISVIFIYEA+  ++ L+++PAV  ATALLS  VA+TTF     +   R SPY  K  R+V++DFAPTIG+  G         ++G    L TL +P  F TT+GRPW VPL  LP WAR A+ +PALM +VLLFMDQN
Sbjct:   27 LVEGFGKGLARDIKTRAPSYLSDFTDGLNIKTLSATFFLFFACLAPAVAFGGLMGVTTAGQIGTIEMIAATAGCGVVYSLTAGQPLTIIGSTGPVLAFTAVLYKTAVRLGLPFLPLYAWVGLWTSALLALASLFSLSNMVLYFTRFTDEIFGGLISVIFIYEALRDLSGLYVNPAVPLATALLSSAVAATTFGTATALRGLRTSPYLVKGARDVLADFAPTIGVVAGAXXXXXXXXRHGAAGALQTLAVPAAFTTTAGRPWRVPLLDLPPWARAAALVPALMSTVLLFMDQN 318          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: D7FMX9_ECTSI (Boron transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX9_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 3.120e-112
Identity = 178/290 (61.38%), Postives = 220/290 (75.86%), Query Frame = 1
Query:   16 FLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMTLATLNIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
             +E  G+G+ +DIK KAP+L SDITDG +IK LS + FLFFAC+APAVAFG ++GVATAG +G+IEM+ ATA CG+ YA  +GQP+TIIGSTGPVLAF AVLYK A RMSLPFLPLY+WVG W+AG+L V SAFS+SN++ +FTRFTDEIFSLLISVIFI EA   IT +F    V    A  +LVVA +T+ V   + + RR+ + NKP+RE ++DFAPT+G+ATG   A W  ++Y + L TL +P    TT GRPWLVP   LPVWARWA+  PALM +VLLFMDQN
Sbjct:  292 LVEGFGKGLLADIKGKAPFLKSDITDGFSIKVLSTIFFLFFACLAPAVAFGGMLGVATAGAMGTIEMIAATAVCGMVYAALAGQPLTIIGSTGPVLAFIAVLYKTAARMSLPFLPLYTWVGFWTAGMLGVASAFSLSNMVLFFTRFTDEIFSLLISVIFIMEATKDITGVFASAGVPLVAATSTLVVALSTYGVATILKSLRRTQFLNKPIREFIADFAPTLGVATGTLAAMWGKSRYALALPTLTVPSALTTTVGRPWLVPFMTLPVWARWAAFFPALMSTVLLFMDQN 581          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: A0A4D9DEQ9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEQ9_9STRA)

HSP 1 Score: 320 bits (819), Expect = 3.600e-102
Identity = 172/295 (58.31%), Postives = 211/295 (71.53%), Query Frame = 1
Query:    1 SADTTFLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMTLATLNIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
            S     LE   +GI  D++ KAP+  SD  DG N+K ++A  FLFFAC+APAVAFG LMG  T G IG++EML ATA  GI YAL SGQP+TIIGSTGPVLAFT VLY+ A  ++LPFLPLYSWVG+W++ IL + S  S+SN++ YFTRFTDEIFSLLIS+IF+YEA+  ++  F++P+V  A ALLSLV+A TTF    T+   RR     K VR+V++DFAPTIG+  G        AK    L TL IP  F T+ GRPWLV + ALP+WARWA+ IPALM SVLLFMDQN
Sbjct:  101 SKSQKILERPFKGIVEDVRRKAPHYLSDFKDGANVKGVAATFFLFFACLAPAVAFGGLMGKLTEGNIGTMEMLLATASNGIAYALFSGQPLTIIGSTGPVLAFTLVLYRTAQNLALPFLPLYSWVGIWTSLILFLSSVTSLSNLVNYFTRFTDEIFSLLISLIFLYEAVKDLSSFFINPSVGFAKALLSLVIAVTTFNTSITLAGLRRGKVFTKRVRDVIADFAPTIGVLAGCFLTALAKAKKAEALPTLLIPDSFSTSLGRPWLVNIFALPIWARWAAFIPALMSSVLLFMDQN 395          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: A0A7S3UGS7_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UGS7_9CHLO)

HSP 1 Score: 305 bits (782), Expect = 3.030e-97
Identity = 152/289 (52.60%), Postives = 205/289 (70.93%), Query Frame = 1
Query:   19 LEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMTLATLNIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
             +PLG GI  D+K KAP+  SD  DG+N++ +++  FLFF C+APAVAFG +M +AT G IG++EM+ ATAGCG  YALTSGQP+TI+GSTGPVLA T+ LYK+ +  SLPFLP+Y+WVGLWS+G+L +C+  S SN +K  T+FTDE+FS LI+ IFI EA+     L+L     A  ALLS +V+ TT  V  T+  FRRSP+ NK VR  V+DFAPTIGI      +  V  ++ + L  L +P++F  +  R W+V L ++P+WARWA+A+P +M +VLLF DQN
Sbjct:   53 FQPLGVGIVEDVKRKAPWFTSDFKDGINLRGVASTFFLFFGCLAPAVAFGGMMSLATGGLIGAVEMILATAGCGCVYALTSGQPITIVGSTGPVLALTSALYKMCLTYSLPFLPMYAWVGLWSSGMLMLCALTSTSNAVKLLTKFTDEVFSALIAAIFIAEALKDSLSLYLHAESGAEVALLSTLVSLTTLFVATTLANFRRSPFFNKKVRNTVADFAPTIGIVIATLVSMVVSNRFAINLPMLAVPMEFAPSVPRAWVVNLFSVPLWARWAAAVPGVMVTVLLFFDQN 341          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: A0A7S2USJ7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USJ7_9STRA)

HSP 1 Score: 294 bits (752), Expect = 7.340e-95
Identity = 156/295 (52.88%), Postives = 206/295 (69.83%), Query Frame = 1
Query:   16 FLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVS--AATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMTLATL---NIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
              EPLG GI  DI+ + P+  SDITDG+N ++L+  +FLFFAC+APA+ FG ++  AT G +G+IEM+++TA CG+ Y+L + QP+ +IG  GP LAF+  L +LA RMSLPFLPLY+W GLW+ G+L V S  S SN++K+ T FTDEIFS+LIS IFI+EAI  I+K F  P  S  A  ALL+L  AS TF     + + + S Y  K +R  +S+FAP IG+A G  TA     KYG  +A+L   ++P  F TTSGRPWL+PL  LPVWARWA+ IPAL+ +VLLF+DQN
Sbjct:   84 IFEPLGVGIKRDIRRRLPHYKSDITDGMNAQSLATTLFLFFACLAPAIGFGGILDTATNGAMGAIEMVSSTAFCGVVYSLCAAQPIQLIGPMGPNLAFSISLAQLATRMSLPFLPLYAWTGLWTGGMLCVASLTSASNMVKFLTPFTDEIFSVLISAIFIFEAISDISKPFASPIFSTTATKALLTLTCASVTFGSATVLKSLKNSVYFTKSIRNNLSNFAPAIGVAFGSLTARAARLKYGHVIASLPALSLPSKFATTSGRPWLIPLMDLPVWARWAAYIPALLATVLLFLDQN 378          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: A0A7S1Z6H0_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z6H0_9STRA)

HSP 1 Score: 298 bits (764), Expect = 3.260e-94
Identity = 158/294 (53.74%), Postives = 205/294 (69.73%), Query Frame = 1
Query:   13 TFLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGM---TLATLNIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
            T  E +G GI  D K + P+  SDI DGLN + L+A +FLFFAC+APAV FG+L  VAT   IG++EM+++TA CG+ Y+LTS QP+TIIGSTGPVLAF A L +L+  MSLPFLP+Y+W GLW + IL + S  S S+++KY TRFTDEIFS+LIS IF+ EA+  + + F  PA +   ALL+L+ ASTTF     +   R + Y  K VR+ +S+FAPTIG+ T    A W    +G    +L +L IP  F TTSGRPWLVPL  LPVWARW + +PA+M +VLLF+DQN
Sbjct:   75 TLFEGIGVGIKRDYKKRLPFFKSDIQDGLNTQCLAATLFLFFACLAPAVGFGALFSVATNHAIGTMEMVSSTAACGMIYSLTSAQPLTIIGSTGPVLAFVACLAQLSSAMSLPFLPVYAWTGLWVSAILFMSSITSASSLVKYLTRFTDEIFSVLISTIFVVEALSDVGRTFTSPASTFTKALLTLLCASTTFGTATFLKGLRNTTYFTKTVRDTLSNFAPTIGVVTASLIARWAKLTHGAGVASLPSLAIPSTFATTSGRPWLVPLMDLPVWARWGTFLPAIMATVLLFLDQN 368          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: B7FYF1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYF1_PHATC)

HSP 1 Score: 299 bits (765), Expect = 3.320e-94
Identity = 159/296 (53.72%), Postives = 205/296 (69.26%), Query Frame = 1
Query:    7 DTTFLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMTLA---TLNIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
            D T  E   +GI  D K + P   SDI DGLN++ L+A +FLFFAC+APAV FG L  VAT G IG++EM+++TA CG+ YA+TS QP+TIIGSTGPVLAF A L +LA  ++LPFL LYSW GLW++ IL V S  S SN++KY TRFTDEIFSLLIS IF++EA+  + + F  PA +   ALL+L  A++TF +   +   R++      VR  +S+FAPTIG+ T    A W    +G  LA   +L+IP  F TTSGRPWLVP+   PVWARWA+ +PALM +VLLF+DQN
Sbjct:   87 DETLFEGPFKGIIRDYKARLPLFASDIKDGLNVQCLAATMFLFFACLAPAVGFGGLFDVATGGAIGTVEMVSSTALCGLIYAITSAQPLTIIGSTGPVLAFVACLAQLAKMLNLPFLQLYSWTGLWTSAILFVSSITSASNLVKYLTRFTDEIFSLLISCIFVFEAVSDVGRTFSSPASTFTKALLTLTCAASTFTIATLLKGLRKTSLFPSRVRNTISNFAPTIGVVTASLIARWARVVHGTKLAGLPSLSIPAVFGTTSGRPWLVPILDFPVWARWAAFLPALMATVLLFLDQN 382          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: A0A1Z5KC09_FISSO (Solute carrier family 4 (Anion exchanger), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KC09_FISSO)

HSP 1 Score: 296 bits (758), Expect = 1.780e-93
Identity = 157/291 (53.95%), Postives = 201/291 (69.07%), Query Frame = 1
Query:   16 FLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLD-PAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMTLATLNIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
             LE LGRG+  D   + PY  SD+TDG  +  L+A  F+FFAC+APAV FG L  VA+   IG++EM+T+TA  G+ +ALT+ QP+TIIG TGPVLAF A L ++A    LPFLPLY+W GLW++ IL V +  S SN++KY TRFTDEIFS+LISVIF++EA  +I   F   P V A   LL+LV ASTT+ +   +   RR+ Y NKP+R  +S+FAPTIG+      A      +G+TL  L IP  F TT+GRPWL+PL  LPVWARWAS +PALM +VLLF+DQN
Sbjct:   67 LLEELGRGVRRDFAARLPYWKSDLTDGFQLPCLAATFFMFFACLAPAVGFGGLYAVASNSAIGTVEMITSTAVSGVLFALTAAQPMTIIGGTGPVLAFVACLAQMADMYKLPFLPLYAWTGLWTSAILFVSAMTSASNLVKYLTRFTDEIFSVLISVIFLFEACSNIAGTFSSAPLVQA---LLTLVCASTTYTISTRLQGLRRTAYFNKPIRNTISNFAPTIGVVVAAWLARAARVAHGVTLPALAIPSQFGTTTGRPWLIPLLDLPVWARWASFLPALMATVLLFLDQN 354          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: A0A0G4GX26_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GX26_VITBC)

HSP 1 Score: 293 bits (751), Expect = 2.940e-92
Identity = 156/292 (53.42%), Postives = 204/292 (69.86%), Query Frame = 1
Query:   16 FLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMTLATLNIPVDFVTTSGRPWLV--PLRALPVWARWASAIPALMGSVLLFMDQN 885
             +EP  RGIA D K +     SDI DG+++K LS++ FLFF C+APAVAFGS M  AT GQIGSIEM+ AT   G+ YA  S QP+TIIGSTGPVLAFT+ LYK    M LPFLP Y  +GLW+   L + + FS+SN +KY TR+TDEIFSLLISVIF+YEA++  + LF + AVSA+TA LS  + + TF+    +   R+SP+ N+ +R+  +DF PTI +A G G A     +YG+ L TL++P    T++GRPWL+   L +LP+W RW +A+PALM +VLLFMDQN
Sbjct:   80 LVEPFWRGIARDAKARYALYRSDIVDGISLKALSSIFFLFFGCLAPAVAFGSAMAAATGGQIGSIEMIVATGMLGLIYAAFSAQPLTIIGSTGPVLAFTSALYKGCQAMQLPFLPTYVCIGLWNTLYLGIAAVFSMSNSIKYLTRWTDEIFSLLISVIFMYEALVYFSGLFTNTAVSASTAALSTGIGAFTFIAAVLLSGLRKSPFFNRFIRDKTADFGPTIAVAGGSGLAYLAYLRYGIRLPTLSMPSALTTSTGRPWLMLRSLSSLPLWVRWGAALPALMCTVLLFMDQN 371          
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Match: A0A7S4D862_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D862_HETAK)

HSP 1 Score: 293 bits (749), Expect = 1.810e-91
Identity = 158/291 (54.30%), Postives = 204/291 (70.10%), Query Frame = 1
Query:   19 LEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIAPAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPVLAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTRFTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVGRTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKY-GMTLA-TLNIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN 885
            +E   +G+  D K KAPY  SDI DG N+KTLSAV+FLFF CIAPAVAFG ++   T   IG++EML +T+ CG+ YAL SGQP+TIIGSTGPVLAFT VLY+    +  PFLP+Y+W GLWSAG L + + FS+SNI++ FTRFTDE+FSLLIS IF+ EA+  + +   DP V  A  L +LV+A+TT+     +   + +PY  +  R+V++DFAP++GIA GV  AT + A+  G  L  TL +P  F TTSGRPW V L +LP  ARWA A+PA M +VLLFMDQ 
Sbjct:  132 VEKFLKGLKRDAKAKAPYYISDIKDGFNLKTLSAVVFLFFGCIAPAVAFGGVLSKVTNNAIGTMEMLLSTSVCGMIYALLSGQPLTIIGSTGPVLAFTGVLYRTCAALGQPFLPVYAWTGLWSAGYLGLAAVFSLSNIVEGFTRFTDEVFSLLISAIFVAEAVQGVLRALTDPLVPLAQGLATLVLATTTYQTAVKLKGIKETPYLGRRRRQVLADFAPSLGIAAGVLGATLLKARNAGAALVPTLPVPAVFATTSGRPWAVDLLSLPPAARWACALPAAMAAVLLFMDQT 422          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_983.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YV61_9STRA4.240e-11462.67Bicarbonate transporter n=1 Tax=Tribonema minus Ta... [more]
D7FMX9_ECTSI3.120e-11261.38Boron transporter 1 n=1 Tax=Ectocarpus siliculosus... [more]
A0A4D9DEQ9_9STRA3.600e-10258.31Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3UGS7_9CHLO3.030e-9752.60Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A7S2USJ7_9STRA7.340e-9552.88Hypothetical protein (Fragment) n=2 Tax=Attheya se... [more]
A0A7S1Z6H0_9STRA3.260e-9453.74Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B7FYF1_PHATC3.320e-9453.72Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KC09_FISSO1.780e-9353.95Solute carrier family 4 (Anion exchanger), member ... [more]
A0A0G4GX26_VITBC2.940e-9253.42Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S4D862_HETAK1.810e-9154.30Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_983contigC-australica_Contig_983:5702..7662 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FMX9
PFAMsHCO3_cotransp
Model size887
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons9
Evalue5.12e-113
EggNOG OGsKOG1172@1|root,KOG1172@2759|Eukaryota
Descriptioninorganic anion exchanger activity
Cds size885
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_983.11.1prot_C-australica_Contig_983.11.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_983 5703..7662 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588850.1960597-CDS-C-australica_Contig_983:5702..58021682588850.1960597-CDS-C-australica_Contig_983:5702..5802Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 5703..5802 -
1682588850.2077255-CDS-C-australica_Contig_983:5958..60181682588850.2077255-CDS-C-australica_Contig_983:5958..6018Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 5959..6018 -
1682588850.2179945-CDS-C-australica_Contig_983:6232..63121682588850.2179945-CDS-C-australica_Contig_983:6232..6312Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 6233..6312 -
1682588850.2281334-CDS-C-australica_Contig_983:6458..65931682588850.2281334-CDS-C-australica_Contig_983:6458..6593Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 6459..6593 -
1682588850.2397702-CDS-C-australica_Contig_983:6690..68091682588850.2397702-CDS-C-australica_Contig_983:6690..6809Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 6691..6809 -
1682588850.2497838-CDS-C-australica_Contig_983:6905..70041682588850.2497838-CDS-C-australica_Contig_983:6905..7004Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 6906..7004 -
1682588850.2662995-CDS-C-australica_Contig_983:7123..71841682588850.2662995-CDS-C-australica_Contig_983:7123..7184Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 7124..7184 -
1682588850.2773464-CDS-C-australica_Contig_983:7329..74521682588850.2773464-CDS-C-australica_Contig_983:7329..7452Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 7330..7452 -
1682588850.2877488-CDS-C-australica_Contig_983:7554..76621682588850.2877488-CDS-C-australica_Contig_983:7554..7662Chrysoparadoxa australica CS_1217CDSC-australica_Contig_983 7555..7662 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_983.11.1

>prot_C-australica_Contig_983.11.1 ID=prot_C-australica_Contig_983.11.1|Name=mRNA_C-australica_Contig_983.11.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=295bp
SADTTFLEPLGRGIASDIKNKAPYLGSDITDGLNIKTLSAVIFLFFACIA
PAVAFGSLMGVATAGQIGSIEMLTATAGCGIFYALTSGQPVTIIGSTGPV
LAFTAVLYKLAVRMSLPFLPLYSWVGLWSAGILAVCSAFSVSNILKYFTR
FTDEIFSLLISVIFIYEAIISITKLFLDPAVSAATALLSLVVASTTFMVG
RTVGTFRRSPYANKPVREVVSDFAPTIGIATGVGTATWVGAKYGMTLATL
NIPVDFVTTSGRPWLVPLRALPVWARWASAIPALMGSVLLFMDQN
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mRNA from alignment at C-australica_Contig_983:5702..7662-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_983.11.1 ID=mRNA_C-australica_Contig_983.11.1|Name=mRNA_C-australica_Contig_983.11.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1961bp|location=Sequence derived from alignment at C-australica_Contig_983:5702..7662- (Chrysoparadoxa australica CS_1217)
TCCGCTGACACCACGTTCCTTGAGCCATTGGGGCGAGGCATTGCCTCTGA CATTAAGAATAAGGCGCCATACCTCGGATCGGACATCACAGATGGACTCA ACATCAAGGTTCGTAGCTGCTCCGCTACCATGCATGATTACCTTGACATG AGCATCATTCCCCTGCTTTTCGTTCCCTTCCTCGACTGACTGTTCCCGCC TCTCTTTCAGACCCTCTCTGCTGTCATCTTCCTCTTTTTTGCTTGCATAG CTCCGGCCGTGGCCTTTGGAAGCCTCATGGGAGTTGCCACAGCGGGCCAG ATTGGCAGCATTGAGATGCTCACTGCAACAGCGGTAAGAACGGCTCCCTC GTCCCTAGCCACAAGCAGTTTGCCAAGCTTTAGCTTCGTTGCGTGTGGGG GCTCATAGCACATCCAGCTTTCTGTGATTTGCTCTTGGAATTCTCTTGAA ATTCTTCTTGACTTCCTCTTGGCTCCAGGGATGTGGAATTTTCTACGCTC TCACAAGTGGGCAACCCGTCACCATTATTGGCAGCACAGGCACGTTCTTC TAGCTTTGCTCCAGTCAGCATGACCCACGCTATTTGCTTCTCTTAGCCTT TTAACACCCCTCTCACCTGAGCCCAACCACCAACCACTGACCATAATGAC CATGACAGGCCCTGTTCTTGCTTTCACTGCGGTCCTCTACAAGCTAGCAG TGAGGATGTCATTGCCATTCCTACCTCTCTATTCATGGGTTGGTCTCTGG AGCGCAGGTAAGCCTAAGCTCACCAATTTTTGCATATACCGACAGCTTGA GGGGCTGCATCAAAGTTTAAAGCTCTAAACGCACCGGGGCCCTCCCTCCC CAGGTATTCTGGCTGTGTGCAGCGCATTCAGTGTGAGCAACATCCTCAAG TACTTTACTCGCTTCACCGATGAGATCTTCAGCCTGCTCATCAGCGTCAT CTTCATCTACGAGGCCATCATTGTAAGCCACTTGCACGCCGTACCATCTG TTTCCCTAGCTTCAGCACTACCCTGGACTGACCTGACCTGACCTGATCTG ACCTTGCTTTCTTTTTCAGTCCATCACCAAGCTGTTTCTGGACCCAGCTG TCTCTGCGGCAACTGCTCTGCTGAGCCTGGTGGTTGCTTCAACCACCTTC ATGGTTGGCCGCACCGTTGGTACCTTCAGGCGATCACCCTACGCCAACAA GCCGGTAAGCGAGTCCTGCCGCTTCAATCAAAGAGCACTGACCAAGATGA TGATCACCCGGCACCCATCTCTCAGCCCTTTCACCAAGACTGAAACTGAA TGAGAAGACAGCTAACGCAAGCTAACCCTGAACCACCTCTGATCTGGCAG GTGCGTGAGGTGGTCTCTGACTTTGCCCCTACCATTGGCATTGCCACTGG TGTTGGCACAGCCACCTGGGTTGGCGCCAAGTGAGTGGGTGCAATGCATA TCCTACCTAACCACTTAGCTAGCTCAGCTCAAGCGTATGACCTTACCTTA CCTGATCTGGCACGCCCTTGACGCCTGCTGCATCATGACTGTAACCCTAT TAATAACGATTGATAGAGCGCTCTCATGGTGGTCTAGTTGCTGCGTGCTC ACTGCCCCTGCCCCTCCCCCCCCCTCCTCTTTACTTCACGCTAGGTATGG CATGACCCTTGCAACCTTGAACATTCCGGTTGACTTTGTAACGACTAGTG GCAGGTACGTGCAGATGAGGATGAGTGAGAGCACGGCAGCTCAGCCCCTA ACTGAAAGGCAATCATAGCCTCAAGTGATGCTGCTCTCACAGCCTGTACC TTGGTTGTGCAGCTTTCATTAGTTACACCTTACTTCTTTAACCACTTGTC CTCTCACCAGGCCATGGCTAGTGCCCTTAAGAGCTCTCCCTGTTTGGGCC CGTTGGGCTAGCGCCATCCCTGCACTTATGGGCTCTGTGCTCCTCTTCAT GGACCAGAACA
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Coding sequence (CDS) from alignment at C-australica_Contig_983:5702..7662-

>mRNA_C-australica_Contig_983.11.1 ID=mRNA_C-australica_Contig_983.11.1|Name=mRNA_C-australica_Contig_983.11.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=885bp|location=Sequence derived from alignment at C-australica_Contig_983:5702..7662- (Chrysoparadoxa australica CS_1217)
TCCGCTGACACCACGTTCCTTGAGCCATTGGGGCGAGGCATTGCCTCTGA
CATTAAGAATAAGGCGCCATACCTCGGATCGGACATCACAGATGGACTCA
ACATCAAGACCCTCTCTGCTGTCATCTTCCTCTTTTTTGCTTGCATAGCT
CCGGCCGTGGCCTTTGGAAGCCTCATGGGAGTTGCCACAGCGGGCCAGAT
TGGCAGCATTGAGATGCTCACTGCAACAGCGGGATGTGGAATTTTCTACG
CTCTCACAAGTGGGCAACCCGTCACCATTATTGGCAGCACAGGCCCTGTT
CTTGCTTTCACTGCGGTCCTCTACAAGCTAGCAGTGAGGATGTCATTGCC
ATTCCTACCTCTCTATTCATGGGTTGGTCTCTGGAGCGCAGGTATTCTGG
CTGTGTGCAGCGCATTCAGTGTGAGCAACATCCTCAAGTACTTTACTCGC
TTCACCGATGAGATCTTCAGCCTGCTCATCAGCGTCATCTTCATCTACGA
GGCCATCATTTCCATCACCAAGCTGTTTCTGGACCCAGCTGTCTCTGCGG
CAACTGCTCTGCTGAGCCTGGTGGTTGCTTCAACCACCTTCATGGTTGGC
CGCACCGTTGGTACCTTCAGGCGATCACCCTACGCCAACAAGCCGGTGCG
TGAGGTGGTCTCTGACTTTGCCCCTACCATTGGCATTGCCACTGGTGTTG
GCACAGCCACCTGGGTTGGCGCCAAGTATGGCATGACCCTTGCAACCTTG
AACATTCCGGTTGACTTTGTAACGACTAGTGGCAGGCCATGGCTAGTGCC
CTTAAGAGCTCTCCCTGTTTGGGCCCGTTGGGCTAGCGCCATCCCTGCAC
TTATGGGCTCTGTGCTCCTCTTCATGGACCAGAAC
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