prot_C-australica_Contig_9794.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_9794.1.1
Unique Nameprot_C-australica_Contig_9794.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length97
Homology
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A840UB29_9GAMM (Shikimate kinase n=1 Tax=Marinobacter oulmenensis TaxID=643747 RepID=A0A840UB29_9GAMM)

HSP 1 Score: 181 bits (459), Expect = 2.650e-56
Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKRVVLVGPMGAGKSTIGRMLA+ELGYRFLDSDRIIEERCGANIPWIFDVEGE+GFRLRETAMLDELS ED+TVLATGGGAV R ENH +L+RD
Sbjct:    1 MSLPKRVVLVGPMGAGKSTIGRMLARELGYRFLDSDRIIEERCGANIPWIFDVEGEEGFRLRETAMLDELSGEDKTVLATGGGAVTRPENHELLRRD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A366GNR5_9GAMM (Shikimate kinase n=6 Tax=Marinobacter TaxID=2742 RepID=A0A366GNR5_9GAMM)

HSP 1 Score: 179 bits (455), Expect = 8.360e-56
Identity = 86/97 (88.66%), Postives = 93/97 (95.88%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKR+VLVGPMGAGKSTIGRMLA+ELGYRFLD+DRIIEERCGANIPWIFDVEGEDGFR RETAML++LS E +TVLATGGGAVMR ENHP+LKRD
Sbjct:    1 MSLPKRIVLVGPMGAGKSTIGRMLARELGYRFLDTDRIIEERCGANIPWIFDVEGEDGFRQRETAMLEQLSAEPQTVLATGGGAVMRPENHPLLKRD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: UPI001245398F (shikimate kinase AroK n=1 Tax=Marinobacter halotolerans TaxID=1569211 RepID=UPI001245398F)

HSP 1 Score: 178 bits (452), Expect = 2.390e-55
Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFR RETAML ELS + +TVLATGGGAVMR+ENH  LKRD
Sbjct:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRQRETAMLSELSEQPQTVLATGGGAVMREENHAHLKRD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A4Z1C5K2_9GAMM (Shikimate kinase n=1 Tax=Marinobacter confluentis TaxID=1697557 RepID=A0A4Z1C5K2_9GAMM)

HSP 1 Score: 177 bits (450), Expect = 4.810e-55
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKRVVLVGPMGAGKSTIGRMLA+ELGYRF+DSDRIIEERCGANIPWIFDVEGEDGFR RETAML+EL+ E  +VLATGGGAVMR+ENHP LKRD
Sbjct:    1 MSLPKRVVLVGPMGAGKSTIGRMLARELGYRFMDSDRIIEERCGANIPWIFDVEGEDGFRQRETAMLNELADEPESVLATGGGAVMREENHPHLKRD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A285Q9B9_9GAMM (Shikimate kinase n=1 Tax=Marinobacter sp. LV10R510-11A TaxID=1415568 RepID=A0A285Q9B9_9GAMM)

HSP 1 Score: 177 bits (450), Expect = 4.810e-55
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKRVVL+GPMGAGKSTIGRMLA+ELGYRFLDSDRIIE RCGANIPWIFDVEGE GFRLRETAMLDELS E  +VLATGGGAVMR ENHP+LK+D
Sbjct:    1 MSLPKRVVLIGPMGAGKSTIGRMLARELGYRFLDSDRIIEARCGANIPWIFDVEGEGGFRLRETAMLDELSAEPESVLATGGGAVMRAENHPLLKKD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A072MWD0_9GAMM (Shikimate kinase n=2 Tax=Marinobacter TaxID=2742 RepID=A0A072MWD0_9GAMM)

HSP 1 Score: 177 bits (449), Expect = 6.830e-55
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            M LPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIE+RCGANIPWIFDVEGE+GFR RETAMLDELS E+RTVLATGGGAVM+ ENH +LK+D
Sbjct:    1 MPLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEDRCGANIPWIFDVEGEEGFRQRETAMLDELSLEERTVLATGGGAVMKPENHSLLKKD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A1V2DVG2_9GAMM (Shikimate kinase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1V2DVG2_9GAMM)

HSP 1 Score: 177 bits (448), Expect = 9.700e-55
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKR+VLVGPMGAGKSTIGRMLA+ELGYRFLD+DRIIEERCGANIPWIFDVEGEDGFR RETAML ELS E RTVLATGGGAVMR+EN P+LK+D
Sbjct:    1 MSLPKRIVLVGPMGAGKSTIGRMLARELGYRFLDTDRIIEERCGANIPWIFDVEGEDGFRQRETAMLRELSQEPRTVLATGGGAVMREENLPLLKQD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A1D9GMF6_9GAMM (Shikimate kinase n=3 Tax=Marinobacter TaxID=2742 RepID=A0A1D9GMF6_9GAMM)

HSP 1 Score: 177 bits (448), Expect = 9.700e-55
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIE+RCGANIPWIFDVEGE+GFR RETAML ELS E  TVLATGGGAVMRQENH +LK+D
Sbjct:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEDRCGANIPWIFDVEGEEGFRQRETAMLKELSSEPNTVLATGGGAVMRQENHLLLKKD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: W5YJ93_9GAMM (Shikimate kinase n=32 Tax=Gammaproteobacteria TaxID=1236 RepID=W5YJ93_9GAMM)

HSP 1 Score: 176 bits (445), Expect = 2.770e-54
Identity = 88/97 (90.72%), Postives = 90/97 (92.78%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAML+ELS    TVLATGGGAVMR EN P LK+D
Sbjct:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLEELSLLPDTVLATGGGAVMRPENRPFLKQD 97
[Close]
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: UPI00193A89B0 (shikimate kinase AroK n=1 Tax=Marinobacter sediminum TaxID=256323 RepID=UPI00193A89B0)

HSP 1 Score: 176 bits (445), Expect = 2.770e-54
Identity = 88/97 (90.72%), Postives = 90/97 (92.78%), Query Frame = 0 
Query:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 97
            MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAML+ELS    TVLATGGGAVMR EN P LK+D
Sbjct:    1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLEELSLLPDTVLATGGGAVMRPENRPFLKQD 97
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A840UB29_9GAMM2.650e-5690.72Shikimate kinase n=1 Tax=Marinobacter oulmenensis ... [more]
A0A366GNR5_9GAMM8.360e-5688.66Shikimate kinase n=6 Tax=Marinobacter TaxID=2742 R... [more]
UPI001245398F2.390e-5590.72shikimate kinase AroK n=1 Tax=Marinobacter halotol... [more]
A0A4Z1C5K2_9GAMM4.810e-5588.66Shikimate kinase n=1 Tax=Marinobacter confluentis ... [more]
A0A285Q9B9_9GAMM4.810e-5588.66Shikimate kinase n=1 Tax=Marinobacter sp. LV10R510... [more]
A0A072MWD0_9GAMM6.830e-5588.66Shikimate kinase n=2 Tax=Marinobacter TaxID=2742 R... [more]
A0A1V2DVG2_9GAMM9.700e-5588.66Shikimate kinase n=2 Tax=Gammaproteobacteria TaxID... [more]
A0A1D9GMF6_9GAMM9.700e-5589.69Shikimate kinase n=3 Tax=Marinobacter TaxID=2742 R... [more]
W5YJ93_9GAMM2.770e-5490.72Shikimate kinase n=32 Tax=Gammaproteobacteria TaxI... [more]
UPI00193A89B02.770e-5490.72shikimate kinase AroK n=1 Tax=Marinobacter sedimin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01100SHIKIMTKNASEcoord: 7..22
score: 60.1
coord: 59..67
score: 47.01
coord: 31..44
score: 43.96
coord: 77..86
score: 63.08
NoneNo IPR availablePIRSRPIRSR000705-3PIRSR000705-3coord: 11..33
e-value: 0.0075
score: 14.2
NoneNo IPR availablePANTHERPTHR21087:SF16SHIKIMATE KINASE 1, CHLOROPLASTICcoord: 6..95
NoneNo IPR availablePANTHERPTHR21087SHIKIMATE KINASEcoord: 6..95
IPR031322Shikimate kinase/gluconokinasePFAMPF01202SKIcoord: 13..95
e-value: 5.5E-33
score: 114.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 3..97
e-value: 1.9E-34
score: 121.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..96
IPR023000Shikimate kinase, conserved sitePROSITEPS01128SHIKIMATE_KINASEcoord: 60..85
IPR000623Shikimate kinase/Threonine synthase-like 1CDDcd00464SKcoord: 6..96
e-value: 9.83042E-42
score: 132.294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9794contigC-australica_Contig_9794:1..291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9794.1.1mRNA_C-australica_Contig_9794.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_9794 1..291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_9794.1.1 ID=prot_C-australica_Contig_9794.1.1|Name=mRNA_C-australica_Contig_9794.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=97bp
MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWI
FDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031322Shikimate/glucono_kinase
IPR027417P-loop_NTPase
IPR023000Shikimate_kinase_CS
IPR000623Shikimate_kinase/TSH1