prot_C-australica_Contig_9792.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_9792.2.1
Unique Nameprot_C-australica_Contig_9792.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length54
Homology
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: A0A2D4SCM8_9GAMM (Fatty acid oxidation complex subunit alpha FadJ n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4SCM8_9GAMM)

HSP 1 Score: 71.6 bits (174), Expect = 3.020e-13
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            M  KQ+ F++E RDD VAVVRM+VPGEAHNVLKAEF DEFE LF +L+ +  ++
Sbjct:    1 MPKKQTAFELEIRDDNVAVVRMNVPGEAHNVLKAEFTDEFEDLFRQLKGNGQLQ 54          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: A0A258C3A2_9ALTE (Fatty acid oxidation complex subunit alpha FadJ (Fragment) n=1 Tax=Alishewanella sp. 32-51-5 TaxID=1970315 RepID=A0A258C3A2_9ALTE)

HSP 1 Score: 60.5 bits (145), Expect = 7.020e-10
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0
Query:    1 MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            M    S+F +  RDD VAV+ MD+PGE+ NVLKA FADE +A+ ++L  D+T+K
Sbjct:    1 MTETVSSFSLNIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLK 54          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: A0A3L8Q213_9GAMM (Fatty acid oxidation complex subunit alpha FadJ n=2 Tax=Parashewanella TaxID=2547964 RepID=A0A3L8Q213_9GAMM)

HSP 1 Score: 61.6 bits (148), Expect = 1.020e-9
Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    5 QSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            + TF++E+RDDG+AVV MDVPG+  N L+AEFA+E   L   ++ DN+IK
Sbjct:    2 ERTFNLERRDDGIAVVTMDVPGDTMNTLRAEFANEISELLSEIKRDNSIK 51          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: UPI00109F6413 (fatty acid oxidation complex subunit alpha FadJ n=1 Tax=Ningiella ruwaisensis TaxID=2364274 RepID=UPI00109F6413)

HSP 1 Score: 61.2 bits (147), Expect = 1.390e-9
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0
Query:    6 STFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            S F +E+RDDG+A++ MDVPGE+ N LKA+F DE  A+ + ++ DN IK
Sbjct:    2 SAFKLEKRDDGIAILTMDVPGESMNTLKADFGDEISAILDDIQADNAIK 50          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: A0A516HDE4_9GAMM (Fatty acid oxidation complex subunit alpha FadJ n=2 Tax=Thalassotalea TaxID=1518149 RepID=A0A516HDE4_9GAMM)

HSP 1 Score: 61.2 bits (147), Expect = 1.390e-9
Identity = 26/49 (53.06%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    6 STFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            STF +E++D+G+A ++MDV GE  N L+AEFADEF  + E++++DN+IK
Sbjct:    5 STFTLERQDNGIAFLKMDVVGETMNTLRAEFADEFSTVLEKIKSDNSIK 53          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: A0A3M1TPM8_9BACT (Fatty acid oxidation complex subunit alpha FadJ n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1TPM8_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 1.390e-9
Identity = 32/52 (61.54%), Postives = 35/52 (67.31%), Query Frame = 0
Query:    3 SKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            S   TF +E RDDGVAVV MDVPGE  N LKA FADEFE LF  L  D  ++
Sbjct:    2 SDSKTFRVETRDDGVAVVWMDVPGEPVNTLKASFADEFEELFAGLAGDANLR 53          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: I8UEH0_9ALTE (Fatty acid oxidation complex subunit alpha n=5 Tax=Alishewanella TaxID=111142 RepID=I8UEH0_9ALTE)

HSP 1 Score: 60.5 bits (145), Expect = 2.600e-9
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 0
Query:    1 MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            M    S+F +  RDD VAV+ MD+PGE+ NVLKA FADE +A+ ++L  D+T+K
Sbjct:    1 MTDTVSSFSLSIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLK 54          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: A0A1S2TY10_9GAMM (Fatty acid oxidation complex subunit alpha n=69 Tax=Shewanella TaxID=22 RepID=A0A1S2TY10_9GAMM)

HSP 1 Score: 60.5 bits (145), Expect = 2.600e-9
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    1 MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            M +   +F + +RDDG+A++ MDVPGE+ N LKAEF  E  AL   ++TD++IK
Sbjct:    1 MENSNKSFSLSRRDDGIAILSMDVPGESMNTLKAEFGPEISALLSEIKTDSSIK 54          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: UPI000E2064FA (fatty acid oxidation complex subunit alpha FadJ n=1 Tax=Gallaecimonas mangrovi TaxID=2291597 RepID=UPI000E2064FA)

HSP 1 Score: 60.5 bits (145), Expect = 2.600e-9
Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    7 TFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            TF +E+R+DG+ ++RMDVPGE  N LKA FADE  A+ E +R D  IK
Sbjct:    5 TFSLERREDGIGIIRMDVPGETMNTLKAAFADEIRAILEDVRHDPAIK 52          
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match: A0A350QKX3_9BACT (3-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax=Candidatus Azambacteria bacterium TaxID=2053511 RepID=A0A350QKX3_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 3.510e-9
Identity = 26/51 (50.98%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    4 KQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 54
            +Q++F +  RDD VAV+ MD+PGE+ NVLKA FADE +A+ + L++D+++K
Sbjct:    5 QQNSFSLALRDDHVAVITMDIPGESMNVLKASFADEIDAILKTLQSDSSVK 55          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4SCM8_9GAMM3.020e-1362.96Fatty acid oxidation complex subunit alpha FadJ n=... [more]
A0A258C3A2_9ALTE7.020e-1051.85Fatty acid oxidation complex subunit alpha FadJ (F... [more]
A0A3L8Q213_9GAMM1.020e-954.00Fatty acid oxidation complex subunit alpha FadJ n=... [more]
UPI00109F64131.390e-953.06fatty acid oxidation complex subunit alpha FadJ n=... [more]
A0A516HDE4_9GAMM1.390e-953.06Fatty acid oxidation complex subunit alpha FadJ n=... [more]
A0A3M1TPM8_9BACT1.390e-961.54Fatty acid oxidation complex subunit alpha FadJ n=... [more]
I8UEH0_9ALTE2.600e-951.85Fatty acid oxidation complex subunit alpha n=5 Tax... [more]
A0A1S2TY10_9GAMM2.600e-948.15Fatty acid oxidation complex subunit alpha n=69 Ta... [more]
UPI000E2064FA2.600e-956.25fatty acid oxidation complex subunit alpha FadJ n=... [more]
A0A350QKX3_9BACT3.510e-950.983-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..54
NoneNo IPR availableGENE3D3.90.226.10coord: 1..54
e-value: 5.9E-8
score: 34.2
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 3..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9792contigC-australica_Contig_9792:691..852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9792.2.1mRNA_C-australica_Contig_9792.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_9792 691..852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_9792.2.1 ID=prot_C-australica_Contig_9792.2.1|Name=mRNA_C-australica_Contig_9792.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=54bp
MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTD
NTIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom_sf