mRNA_C-australica_Contig_9677.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9677.1.1
Unique NamemRNA_C-australica_Contig_9677.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: A0A222E7R2_9RHOB (Arginine--tRNA ligase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E7R2_9RHOB)

HSP 1 Score: 549 bits (1415), Expect = 1.210e-192
Identity = 279/288 (96.88%), Postives = 280/288 (97.22%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLF+ GEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDA LAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSA QAKI LARS  VV SA LGIL
Sbjct:  284 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFQKGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDAALAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSATQAKIALARSVAVVISAGLGIL 571          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: A0A0B3S4H8_9RHOB (Arginine--tRNA ligase n=11 Tax=Rhodobacterales TaxID=204455 RepID=A0A0B3S4H8_9RHOB)

HSP 1 Score: 518 bits (1333), Expect = 3.380e-180
Identity = 258/288 (89.58%), Postives = 271/288 (94.10%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRGVLEPPKGKKPEDWEPREQTLFKST+HGDDVDRPIMKSDG+WTYFAPDIAYHYDKV RGFDLLIDIFGADHGGYVKRMKAAVSALSDG+VPLEIKLIQLVKLFKNGEPFKMSKRAGTF+TLRDLV++VGPDVARFHMLTRKSD ALDFD DKVVEQSKENPVFYVQYAHARICSVLRKA E GVDVSDA LA ADLSGMTH +E+ L+ KLAEWPRLVEIAARTQEPHRIATYL ELAADLHGLWNRGND+PELRFVQDDP+A Q+KI LAR+  VV SA LGIL
Sbjct:  284 IYRGVLEPPKGKKPEDWEPREQTLFKSTDHGDDVDRPIMKSDGSWTYFAPDIAYHYDKVSRGFDLLIDIFGADHGGYVKRMKAAVSALSDGKVPLEIKLIQLVKLFKNGEPFKMSKRAGTFITLRDLVEMVGPDVARFHMLTRKSDQALDFDFDKVVEQSKENPVFYVQYAHARICSVLRKATEDGVDVSDAALAGADLSGMTHASELGLSTKLAEWPRLVEIAARTQEPHRIATYLGELAADLHGLWNRGNDAPELRFVQDDPAATQSKIALARATAVVISAGLGIL 571          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: A0A238KRM5_9RHOB (Arginine--tRNA ligase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KRM5_9RHOB)

HSP 1 Score: 515 bits (1327), Expect = 2.750e-179
Identity = 258/288 (89.58%), Postives = 270/288 (93.75%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRGVLEPPKGK PEDWEPREQTLFKST HGDDVDRPIMKSDG+WTYFAPDIAYHYDKV+RG+DLLIDIFGADHGGYVKRMKAAVSALSDGRVPL+IKLIQ+VKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFD DKVVEQSKENPVFYVQYAHARICSVLRKAAE GVDVSDA LAAADLS M+HP+E+ LA KLAEWPRLVEIAART EPHRIATYLSE+AADLHGLWNRGND PELRF+Q  P+A QAKI LAR+  VV SA LGIL
Sbjct:  284 IYRGVLEPPKGKTPEDWEPREQTLFKSTAHGDDVDRPIMKSDGSWTYFAPDIAYHYDKVQRGYDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLDIKLIQMVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDFDKVVEQSKENPVFYVQYAHARICSVLRKAAEEGVDVSDAALAAADLSSMSHPSELALATKLAEWPRLVEIAARTHEPHRIATYLSEVAADLHGLWNRGNDQPELRFLQGTPAATQAKIALARASAVVISAGLGIL 571          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: UPI0010A3CDA0 (arginine--tRNA ligase n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A3CDA0)

HSP 1 Score: 503 bits (1296), Expect = 1.380e-174
Identity = 249/288 (86.46%), Postives = 268/288 (93.06%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRGVLEPPKGKKPEDWEPREQTLFKST HGDDVDRPIMKSDG WTYFAPDIAYH+DKV+RG+DLLIDIFGADHGGYVKRMKAAVSALSDG+ PL+IKLIQLVKL+KNGEPFKMSKRAGTFVTLRD+VD+VGPDVARFHMLTRK+DAALDFD DKVVEQSKENPVFYVQYAHARICSVLRKAAE G+DVSDATLA  DLSGMTH AE+ LAGKLAE+PRL+EIAA+  EPHR+ATYLSELAA+LHGLWNRGND P LRFVQDDP+  QAKI LAR+  VV S+ LGIL
Sbjct:  284 IYRGVLEPPKGKKPEDWEPREQTLFKSTAHGDDVDRPIMKSDGAWTYFAPDIAYHWDKVQRGYDLLIDIFGADHGGYVKRMKAAVSALSDGQTPLDIKLIQLVKLYKNGEPFKMSKRAGTFVTLRDVVDMVGPDVARFHMLTRKNDAALDFDFDKVVEQSKENPVFYVQYAHARICSVLRKAAEQGIDVSDATLADVDLSGMTHTAELALAGKLAEFPRLIEIAAKGNEPHRVATYLSELAAELHGLWNRGNDEPALRFVQDDPATSQAKIALARATAVVISSALGIL 571          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: A0A0N7LZB8_9RHOB (Arginine--tRNA ligase n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0N7LZB8_9RHOB)

HSP 1 Score: 496 bits (1278), Expect = 7.180e-172
Identity = 250/288 (86.81%), Postives = 264/288 (91.67%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDG+WTYFAPDIAYHYDKV+RGFD+LIDIFGADHGGYVKRMKAAVSALS G VPL+IKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVD+VG DVARFHMLTRKSDAALDFD DKVVEQSKENPVFYVQYAHARICSVLRKA EAGV+V+D TLA+     ++HPAE+ LA KLAEWPRLVE AART EPHR+ATYLSELAADLHGLWNRGND P LRFVQDD +A QAKI LAR+  VV SA LGIL
Sbjct:  284 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGSWTYFAPDIAYHYDKVQRGFDMLIDIFGADHGGYVKRMKAAVSALSGGEVPLDIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDMVGADVARFHMLTRKSDAALDFDFDKVVEQSKENPVFYVQYAHARICSVLRKATEAGVNVTDETLASVT-PDLSHPAEVALAAKLAEWPRLVETAARTHEPHRVATYLSELAADLHGLWNRGNDEPGLRFVQDDSAATQAKIALARATAVVISAGLGIL 570          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: A0A8J8B5Y8_9RHOB (Arginine--tRNA ligase n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J8B5Y8_9RHOB)

HSP 1 Score: 494 bits (1273), Expect = 4.250e-171
Identity = 243/288 (84.38%), Postives = 263/288 (91.32%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRGVL+PPKGK PEDWEPREQTLFKSTEHGDDVDRPIMKSDG+WTYFAPDIAYHYDK+ RGFD LIDIFGADHGGYVKRMKAAVSALSDGRVPL+IKL+QLVKL+KNGEPFKMSKRAGTFVTLRD+VD+VG D ARF MLTRK+DA LDFD DKVVEQSKENP+FYVQYAHARICSVLRKAAE G+DVSDATLAAAD SGMTH AE+ LAGKLAEWPRLVEIAAR  EPHR+ATYL+ELA+DLHGLWN GND   LRF+QDDP+  ++KI LAR+  VV SA LGIL
Sbjct:  284 IYRGVLQPPKGKTPEDWEPREQTLFKSTEHGDDVDRPIMKSDGSWTYFAPDIAYHYDKITRGFDQLIDIFGADHGGYVKRMKAAVSALSDGRVPLDIKLLQLVKLYKNGEPFKMSKRAGTFVTLRDVVDMVGADAARFQMLTRKNDAPLDFDFDKVVEQSKENPIFYVQYAHARICSVLRKAAEQGIDVSDATLAAADTSGMTHKAELALAGKLAEWPRLVEIAARNHEPHRVATYLTELASDLHGLWNMGNDDTSLRFIQDDPATSRSKIALARAVAVVISAGLGIL 571          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: UPI000EF4D919 (arginine--tRNA ligase n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF4D919)

HSP 1 Score: 492 bits (1266), Expect = 4.740e-170
Identity = 247/288 (85.76%), Postives = 263/288 (91.32%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRGVLEPPKGK PEDWEPREQTLFKST HGDDVDRPIMKSDG+WTYFAPDIAYHYDKV+RGFD+LIDIFGADHGGYVKRMKAAVSALS+GRVPL+IKLIQLVKLFKNGEPFKMSKRAGTF+TLRDLV++VG DVARFHMLTRKSDAALDFD DKVVEQSKENPVFYVQYAHARICS LRKAAEAGVDVSDATLA      ++H AE+ LA KLAEWPRLVEIAART EPHRIATYLSELA+DLHGLWN+G D+PE+RFVQD P A QAKI L R+  VV SA LGIL
Sbjct:  284 IYRGVLEPPKGKTPEDWEPREQTLFKSTAHGDDVDRPIMKSDGSWTYFAPDIAYHYDKVQRGFDMLIDIFGADHGGYVKRMKAAVSALSEGRVPLDIKLIQLVKLFKNGEPFKMSKRAGTFITLRDLVEMVGADVARFHMLTRKSDAALDFDFDKVVEQSKENPVFYVQYAHARICSALRKAAEAGVDVSDATLAEVT-PDLSHTAEVALAAKLAEWPRLVEIAARTHEPHRIATYLSELASDLHGLWNQGKDTPEMRFVQDSPDATQAKILLVRATAVVISAGLGIL 570          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: UPI001D0C6667 (arginine--tRNA ligase n=1 Tax=Cognatishimia sp. F0-27 TaxID=2816855 RepID=UPI001D0C6667)

HSP 1 Score: 489 bits (1259), Expect = 5.630e-169
Identity = 241/288 (83.68%), Postives = 262/288 (90.97%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRG LEPPKGKKPEDWEPREQTLF+ST HGDDVDRPIMKSDG+WTYFAPDIAYHYDK+ RG+DLLIDIFGADHGGYVKRMKAAVSALSDG+VPL+IKL+QLVKL+KNGEPFKMSKRAGTFVTLRD+VD+VGPD ARF MLTR++DAALDFD DKVVEQS+ENPVFYVQYAHAR+CSVLRKAA+AGV   DA+LA ADLSG+TH AE  LAGKLAEWPR VEIAART EPHRIATYLSELAA LHGLWNRGND P LRFVQDD +  QAK+ LAR+  +V SA LGIL
Sbjct:  284 IYRGTLEPPKGKKPEDWEPREQTLFRSTAHGDDVDRPIMKSDGSWTYFAPDIAYHYDKITRGYDLLIDIFGADHGGYVKRMKAAVSALSDGKVPLDIKLLQLVKLYKNGEPFKMSKRAGTFVTLRDVVDMVGPDAARFTMLTRRNDAALDFDFDKVVEQSRENPVFYVQYAHARVCSVLRKAADAGVATDDASLAGADLSGLTHEAEQALAGKLAEWPRCVEIAARTNEPHRIATYLSELAAALHGLWNRGNDEPGLRFVQDDAATTQAKLALARATAIVISAGLGIL 571          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: A0A1H3KRA1_9RHOB (Arginine--tRNA ligase n=1 Tax=Citreimonas salinaria TaxID=321339 RepID=A0A1H3KRA1_9RHOB)

HSP 1 Score: 484 bits (1247), Expect = 3.370e-167
Identity = 240/288 (83.33%), Postives = 259/288 (89.93%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRG LEPPKGK PEDWEPREQTLFKST HGDDVDRPIMKSDG WTYFAPDIAYHYDKV RG+D LID+FGADHGGYVKRMKAAV+ALSDGRVPL+IKLIQLVKL++NGEPFKMSKRAGTFVTLRD+VD+VG DVARFHMLTRK+DA LDFD DKVVEQSKENPVFYVQYAHARI SVLRKA EAG+DVSD  LA AD++ MTHPAE+ LAGKLAEWPRLVEIAAR  EPHR+ATYLSELAA+LH LWNRGND   LRF+QDDP+  Q+KI LAR+  VV SA LGIL
Sbjct:  281 IYRGTLEPPKGKTPEDWEPREQTLFKSTAHGDDVDRPIMKSDGGWTYFAPDIAYHYDKVTRGYDWLIDVFGADHGGYVKRMKAAVAALSDGRVPLDIKLIQLVKLYRNGEPFKMSKRAGTFVTLRDVVDMVGADVARFHMLTRKNDAPLDFDFDKVVEQSKENPVFYVQYAHARIASVLRKAPEAGIDVSDDALARADMALMTHPAELALAGKLAEWPRLVEIAARNTEPHRVATYLSELAAELHALWNRGNDETGLRFIQDDPATSQSKIALARAVSVVISAGLGIL 568          
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Match: X6KUD6_9RHOB (Arginine--tRNA ligase n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6KUD6_9RHOB)

HSP 1 Score: 484 bits (1246), Expect = 5.100e-167
Identity = 244/289 (84.43%), Postives = 265/289 (91.70%), Query Frame = 1
Query:    1 IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAPDIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLIQLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALDFDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLSGMTH-PAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNRGNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL 864
            IYRGVLEPPKGK PEDWEPREQTLFKSTEHGDDVDRPI KSDG+WTYFAPDIAYHYDKV RGFD+LIDIFGADHGGYVKRMKAAVSALS+GRVPL+IKLIQLVKL+KNG+PFKMSKRAGTFVTLRD+VD+VG DVARFHMLTRK DAALDFD DKVVEQSKENPVFYVQYAHARICSVLRKAA+AG+DV+DATLA  D++ +   PAEI LA KLAEWPRLVEIAART EPHR+ATYLSE+AADLHGLWN+GND+  LRFVQDDP+A Q+KI LAR+  VV  A LGIL
Sbjct:  284 IYRGVLEPPKGKTPEDWEPREQTLFKSTEHGDDVDRPIKKSDGSWTYFAPDIAYHYDKVSRGFDMLIDIFGADHGGYVKRMKAAVSALSEGRVPLDIKLIQLVKLYKNGQPFKMSKRAGTFVTLRDVVDMVGADVARFHMLTRKPDAALDFDFDKVVEQSKENPVFYVQYAHARICSVLRKAADAGIDVTDATLA--DVTPVLEDPAEIALAAKLAEWPRLVEIAARTHEPHRVATYLSEVAADLHGLWNKGNDNTALRFVQDDPAATQSKILLARATAVVIRAGLGIL 570          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9677.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E7R2_9RHOB1.210e-19296.88Arginine--tRNA ligase n=3 Tax=Roseobacteraceae Tax... [more]
A0A0B3S4H8_9RHOB3.380e-18089.58Arginine--tRNA ligase n=11 Tax=Rhodobacterales Tax... [more]
A0A238KRM5_9RHOB2.750e-17989.58Arginine--tRNA ligase n=1 Tax=Maliponia aquimaris ... [more]
UPI0010A3CDA01.380e-17486.46arginine--tRNA ligase n=1 Tax=Primorskyibacter sp.... [more]
A0A0N7LZB8_9RHOB7.180e-17286.81Arginine--tRNA ligase n=1 Tax=Tropicibacter naphth... [more]
A0A8J8B5Y8_9RHOB4.250e-17184.38Arginine--tRNA ligase n=1 Tax=Aestuariicoccus sp. ... [more]
UPI000EF4D9194.740e-17085.76arginine--tRNA ligase n=1 Tax=Tropicibacter sp. LM... [more]
UPI001D0C66675.630e-16983.68arginine--tRNA ligase n=1 Tax=Cognatishimia sp. F0... [more]
A0A1H3KRA1_9RHOB3.370e-16783.33Arginine--tRNA ligase n=1 Tax=Citreimonas salinari... [more]
X6KUD6_9RHOB5.100e-16784.43Arginine--tRNA ligase n=1 Tax=Rhodobacteraceae bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9677contigC-australica_Contig_9677:1..864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1342302.JASC01000014_gene1871
Preferred nameargS
PFAMsArg_tRNA_synt_N,DALR_1,tRNA-synt_1d
Model size864
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00055,RC00523
KEGG koko:K01887
KEGG ReactionR03646
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.1e-163
EggNOG OGsCOG0018@1|root,COG0018@2|Bacteria,1MU4J@1224|Proteobacteria,2TS3Y@28211|Alphaproteobacteria,3ZVE2@60136|Sulfitobacter
EC6.1.1.19
DescriptionArginyl-tRNA synthetase
Cds size864
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588833.3953307-CDS-C-australica_Contig_9677:0..8641682588833.3953307-CDS-C-australica_Contig_9677:0..864Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9677 1..864 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9677.1.1prot_C-australica_Contig_9677.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9677 1..864 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9677.1.1

>prot_C-australica_Contig_9677.1.1 ID=prot_C-australica_Contig_9677.1.1|Name=mRNA_C-australica_Contig_9677.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=288bp
IYRGVLEPPKGKKPEDWEPREQTLFKSTEHGDDVDRPIMKSDGNWTYFAP
DIAYHYDKVERGFDLLIDIFGADHGGYVKRMKAAVSALSDGRVPLEIKLI
QLVKLFKNGEPFKMSKRAGTFVTLRDLVDLVGPDVARFHMLTRKSDAALD
FDLDKVVEQSKENPVFYVQYAHARICSVLRKAAEAGVDVSDATLAAADLS
GMTHPAEITLAGKLAEWPRLVEIAARTQEPHRIATYLSELAADLHGLWNR
GNDSPELRFVQDDPSAPQAKIELARSEPVVSSARLGIL
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mRNA from alignment at C-australica_Contig_9677:1..864-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9677.1.1 ID=mRNA_C-australica_Contig_9677.1.1|Name=mRNA_C-australica_Contig_9677.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=864bp|location=Sequence derived from alignment at C-australica_Contig_9677:1..864- (Chrysoparadoxa australica CS_1217)
ATCTATCGCGGCGTGCTGGAACCGCCCAAAGGCAAAAAGCCCGAGGATTG GGAACCGCGCGAACAGACCTTGTTCAAGAGCACCGAACACGGCGACGATG TGGATCGCCCGATCATGAAATCGGACGGCAACTGGACCTATTTCGCGCCG GACATTGCCTATCACTATGACAAGGTGGAGCGCGGTTTTGATCTGCTCAT CGACATCTTTGGTGCCGATCACGGCGGCTATGTCAAACGGATGAAGGCGG CGGTCTCCGCATTGTCCGATGGCCGCGTGCCGCTGGAGATCAAGCTGATC CAGCTGGTTAAGCTGTTCAAGAACGGTGAGCCGTTCAAGATGTCCAAGCG GGCAGGGACCTTTGTCACTCTGCGCGATCTGGTCGATCTGGTCGGGCCTG ACGTGGCGCGTTTTCACATGCTGACCCGCAAAAGCGACGCGGCGCTGGAT TTCGATCTCGACAAAGTTGTTGAGCAGTCCAAGGAAAACCCGGTCTTTTA TGTGCAATACGCCCATGCGAGGATCTGTTCGGTGCTGCGCAAGGCGGCGG AGGCGGGGGTGGATGTCAGCGACGCCACATTGGCCGCTGCTGACCTGTCC GGCATGACCCATCCGGCGGAAATCACGCTGGCGGGCAAGCTGGCAGAATG GCCGCGTCTGGTGGAGATTGCCGCCCGCACGCAGGAACCGCATCGCATCG CCACCTACCTCAGCGAACTGGCCGCCGATCTGCACGGGTTGTGGAACCGG GGCAACGATAGCCCAGAATTGCGCTTTGTGCAGGATGATCCGTCTGCGCC ACAGGCCAAAATTGAGCTGGCACGGTCCGAGCCGGTTGTGAGTTCCGCCC GTCTTGGTATCCTT
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Coding sequence (CDS) from alignment at C-australica_Contig_9677:1..864-

>mRNA_C-australica_Contig_9677.1.1 ID=mRNA_C-australica_Contig_9677.1.1|Name=mRNA_C-australica_Contig_9677.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=864bp|location=Sequence derived from alignment at C-australica_Contig_9677:1..864- (Chrysoparadoxa australica CS_1217)
ATCTATCGCGGCGTGCTGGAACCGCCCAAAGGCAAAAAGCCCGAGGATTG
GGAACCGCGCGAACAGACCTTGTTCAAGAGCACCGAACACGGCGACGATG
TGGATCGCCCGATCATGAAATCGGACGGCAACTGGACCTATTTCGCGCCG
GACATTGCCTATCACTATGACAAGGTGGAGCGCGGTTTTGATCTGCTCAT
CGACATCTTTGGTGCCGATCACGGCGGCTATGTCAAACGGATGAAGGCGG
CGGTCTCCGCATTGTCCGATGGCCGCGTGCCGCTGGAGATCAAGCTGATC
CAGCTGGTTAAGCTGTTCAAGAACGGTGAGCCGTTCAAGATGTCCAAGCG
GGCAGGGACCTTTGTCACTCTGCGCGATCTGGTCGATCTGGTCGGGCCTG
ACGTGGCGCGTTTTCACATGCTGACCCGCAAAAGCGACGCGGCGCTGGAT
TTCGATCTCGACAAAGTTGTTGAGCAGTCCAAGGAAAACCCGGTCTTTTA
TGTGCAATACGCCCATGCGAGGATCTGTTCGGTGCTGCGCAAGGCGGCGG
AGGCGGGGGTGGATGTCAGCGACGCCACATTGGCCGCTGCTGACCTGTCC
GGCATGACCCATCCGGCGGAAATCACGCTGGCGGGCAAGCTGGCAGAATG
GCCGCGTCTGGTGGAGATTGCCGCCCGCACGCAGGAACCGCATCGCATCG
CCACCTACCTCAGCGAACTGGCCGCCGATCTGCACGGGTTGTGGAACCGG
GGCAACGATAGCCCAGAATTGCGCTTTGTGCAGGATGATCCGTCTGCGCC
ACAGGCCAAAATTGAGCTGGCACGGTCCGAGCCGGTTGTGAGTTCCGCCC
GTCTTGGTATCCTT
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