mRNA_C-australica_Contig_10114.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10114.1.1
Unique NamemRNA_C-australica_Contig_10114.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A2E9HUZ6_9RHOB (OmpR/PhoB-type domain-containing protein n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A2E9HUZ6_9RHOB)

HSP 1 Score: 544 bits (1401), Expect = 2.780e-191
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRKA 837
            IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRKA
Sbjct:  227 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRKA 505          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A238KIQ5_9RHOB (Transcriptional regulator HilA n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KIQ5_9RHOB)

HSP 1 Score: 471 bits (1212), Expect = 3.880e-163
Identity = 238/278 (85.61%), Postives = 258/278 (92.81%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834
            IFTQLVEAE+GHTLWRDRFDG ASEIF+LQD+VAE VAAALEP+LIWAEAARA+AKPT SLAAYDLCLRAAPLVYRQNTL S+ EGLDLL+QALALDP YL AKAL+CYAHTGAVATRWWTFEQA AALPLAREVLD NP+DPLALAY GH+IAYVG ETRRGLTALQRAKVLNPNSATVAMLLGW++NY SENEAAIAELRRARRISPLHP IGVI++GI NALFQ+G I+ AAAQ+EQAL+E+PEFATIHLGLM  YWALGRKE+SARMAE  RRK
Sbjct:  189 IFTQLVEAESGHTLWRDRFDGLASEIFDLQDKVAERVAAALEPKLIWAEAARARAKPTESLAAYDLCLRAAPLVYRQNTLHSVMEGLDLLKQALALDPEYLMAKALVCYAHTGAVATRWWTFEQAAAALPLAREVLDANPDDPLALAYAGHHIAYVGRETRRGLTALQRAKVLNPNSATVAMLLGWIYNYQSENEAAIAELRRARRISPLHPQIGVITSGIANALFQLGDIEGAAAQFEQALTEFPEFATIHLGLMGAYWALGRKEDSARMAEAFRRK 466          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A5F1P4B3_9RHOB (Adenylate cyclase n=2 Tax=Tabrizicola TaxID=1443919 RepID=A0A5F1P4B3_9RHOB)

HSP 1 Score: 414 bits (1065), Expect = 8.670e-141
Identity = 209/278 (75.18%), Postives = 235/278 (84.53%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834
            IFTQLVEA TGHTLW+DRFDG+ASEIF+LQDRVAEHVA ALEP+LI  EAARA+AKPT +LAAYDLCLRAAPLV+RQN L  L EG++LLR AL +DPAY+ AKALICYAHTGA ATRWW+FE+A  ALPLAREVLD NP+DPLALAY GHY+AY+G   R GLTAL+RA  LNPNSATVAMLLGWVHNY+S+N+AAI +L+RA RISPLHP IGV+SAGIGNAL Q G    A   YEQAL+EYPEFAT  LGLM  YWALGR E+SARMA+  R K
Sbjct:  193 IFTQLVEAATGHTLWQDRFDGRASEIFDLQDRVAEHVAGALEPKLILTEAARARAKPTDNLAAYDLCLRAAPLVWRQNALPQLEEGIELLRHALEMDPAYVYAKALICYAHTGAFATRWWSFERASEALPLAREVLDANPDDPLALAYAGHYLAYIGSAHREGLTALKRAAFLNPNSATVAMLLGWVHNYMSQNDAAIEQLQRAMRISPLHPHIGVMSAGIGNALLQKGDPQAAVTYYEQALTEYPEFATTQLGLMGCYWALGRVEDSARMADWFRAK 470          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: UPI000A1EFE0C (winged helix-turn-helix domain-containing protein n=1 Tax=Marivita geojedonensis TaxID=1123756 RepID=UPI000A1EFE0C)

HSP 1 Score: 394 bits (1013), Expect = 6.490e-133
Identity = 196/278 (70.50%), Postives = 230/278 (82.73%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834
            IFTQLVEA TG  +W DRFDG + +IF LQD VAE VAAA+EP+LIWAEAARAQAKPT +L AYDLC++AAPLVYRQN+L +L +GL+LLRQAL LD  Y  AKALICYAHTGA A RWW FEQARAALPLA EVLD+NP+DPLAL Y GHYIAY+G +T+ GLTAL+RA  LNPNSA + MLLGWV+NY+ +++ AI  LRRA RISPLHP IG++++GIGNALFQ G+I EA+  YEQAL+EYPEFATI LGLM  YW LG  E+SA+MAE  R+K
Sbjct:  192 IFTQLVEARTGRMIWHDRFDGSSDDIFNLQDTVAESVAAAIEPKLIWAEAARAQAKPTDNLKAYDLCMKAAPLVYRQNSLANLEDGLELLRQALELDANYTYAKALICYAHTGAFAARWWPFEQARAALPLAHEVLDSNPDDPLALCYVGHYIAYIGHDTKTGLTALKRAHSLNPNSANIEMLLGWVYNYIDQSDLAIEHLRRAIRISPLHPQIGIMTSGIGNALFQKGEIPEASRYYEQALTEYPEFATIQLGLMGCYWRLGELEKSAKMAEWFRQK 469          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A316KSH9_9RHOB (OmpR/PhoB-type domain-containing protein n=1 Tax=Marivita sp. XM-24bin2 TaxID=2133951 RepID=A0A316KSH9_9RHOB)

HSP 1 Score: 383 bits (983), Expect = 2.250e-128
Identity = 191/278 (68.71%), Postives = 226/278 (81.29%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834
            IFTQLVEA+T   +W DRFDG + +IF+LQD VAE VAAA+EP+LIWAEAARAQAKPT +L AYDLC++AAPLVYRQN L++L +GL LLR+AL LDP Y  AKALICYAHTGA A RWW FEQA+AALPLA EVLD+N +DPLAL Y GHYIAY+G +T  GLTAL+RA  LNPNSA + MLLGWV+NY+ +++ AI  LRRA RISPLHP +G++++GIGNALFQ G I EA   YEQAL+EYPEFATI LGLM  YW LG  E+SA+MA   R+K
Sbjct:  192 IFTQLVEAKTSRMIWHDRFDGSSEDIFDLQDTVAESVAAAIEPKLIWAEAARAQAKPTDNLKAYDLCMKAAPLVYRQNALENLEDGLTLLRKALVLDPNYTYAKALICYAHTGAFAARWWPFEQAQAALPLAHEVLDSNSDDPLALCYVGHYIAYMGHDTNTGLTALKRAHSLNPNSANIEMLLGWVYNYIDQSDLAIEHLRRAIRISPLHPQVGIMTSGIGNALFQKGDIAEATKYYEQALTEYPEFATIQLGLMGCYWRLGDFEKSAQMAGWFRQK 469          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A8J7WEU7_9RHOB (Winged helix-turn-helix domain-containing protein n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J7WEU7_9RHOB)

HSP 1 Score: 375 bits (964), Expect = 1.480e-125
Identity = 188/278 (67.63%), Postives = 223/278 (80.22%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834
            I TQLVE ETGHTLWR +FDG + ++F LQD+VAE VAAALEP+LIWAEAAR + KPT SL AYDLCLRAAP+VY QNTLD+L EGL LL +A+ALDP Y QA+ALICYAHTGA ATRWW+ E+A AA+PLAR +LD+N +DPL LAY GHYIAY+GGE  RGLTALQRA  LNPNS TV+MLLGWV+NYL   + AI +L+RARRISPLHP IG+I++GIG A    G  + A    EQAL+E+PEFATI L LM  YWALGR++++ RMA+  R K
Sbjct:  189 ISTQLVECETGHTLWRGKFDGASDDLFALQDQVAESVAAALEPKLIWAEAARTRRKPTESLDAYDLCLRAAPMVYVQNTLDNLEEGLALLHRAVALDPDYAQARALICYAHTGAFATRWWSHEKASAAIPLARALLDSNTDDPLVLAYAGHYIAYLGGEPGRGLTALQRAAALNPNSGTVSMLLGWVYNYLDRPDEAIEQLQRARRISPLHPQIGIITSGIGQAQIIAGNYETAVRHLEQALTEFPEFATIQLSLMGCYWALGRRDDAERMADWFRAK 466          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A1M5W6X9_9RHOB (TolB amino-terminal domain-containing protein n=1 Tax=Marivita hallyeonensis TaxID=996342 RepID=A0A1M5W6X9_9RHOB)

HSP 1 Score: 359 bits (921), Expect = 5.130e-119
Identity = 173/278 (62.23%), Postives = 221/278 (79.50%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834
            IFTQLVEA+T   +W +RFDG   +IF+LQDRVAE VA A+EP++IWAEAAR QAKPT +LAAYDLC++AAPLV RQN+LD+L EG+ LL QALALDP +++AK L CYAHTG+ A RWW+FE+ARAALPLA ++LD   +DP ALA  GHYIAY+G +  RGL A++RA  LNPNSAT+++LLGWV+NYLS+++AAI  L+RA R+SPLHP+IG+ ++GI NA FQ   ++ A   YE+AL +YPEFATI LGL+  YW +G  E+SA+MA   R K
Sbjct:  191 IFTQLVEAKTARMIWHERFDGTTEDIFDLQDRVAERVAGAIEPKMIWAEAARIQAKPTHNLAAYDLCMKAAPLVMRQNSLDNLEEGIGLLNQALALDPGFVRAKGLFCYAHTGSFAARWWSFEKARAALPLAEKLLDEGTDDPFALATAGHYIAYIGQDPHRGLIAVRRANALNPNSATISLLLGWVYNYLSDDDAAIEHLKRALRLSPLHPNIGITTSGIANAYFQKQDLETAIRYYEEALMQYPEFATIQLGLIGCYWKVGEHEKSAQMATWFRNK 468          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A1B6YN95_9RHOB (OmpR/PhoB-type domain-containing protein n=1 Tax=Jannaschia sp. EhC01 TaxID=1849359 RepID=A0A1B6YN95_9RHOB)

HSP 1 Score: 346 bits (888), Expect = 4.120e-114
Identity = 170/275 (61.82%), Postives = 214/275 (77.82%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEIL 825
            IFTQLVEAETG  +W+DRFDG+ SEIF+LQDR+AEHVA ALEP+LIW EAARA AKPT SL+AY+LCL+AAP+VY Q++ DSL  GL  LR+AL LDP Y+QAKAL CYAHT A A+RWWT E A+ ALP AR+VLD++ +D LAL Y GHY+AY+G + + GL AL+RA +LNPNSATVAMLLGWVH YL ENE A+  LRRA RISPLHP   VI +G+G+AL Q G +++A   +E+A + YPEF +    L+ +YWAL R E++  + + +
Sbjct:  185 IFTQLVEAETGRMIWQDRFDGEMSEIFDLQDRLAEHVAGALEPKLIWTEAARASAKPTDSLSAYELCLKAAPVVYLQHSRDSLENGLVFLRKALELDPNYMQAKALYCYAHTSAFASRWWTLETAQNALPYARDVLDSDTDDALALCYAGHYMAYIGRKYQEGLMALKRAAILNPNSATVAMLLGWVHVYLDENEPAVMHLRRALRISPLHPHTAVIKSGLGSALVQSGALEDAVPYFEEAQAAYPEFGSNAFELLGVYWALERPEDARALVQFV 459          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: A0A1X4NY51_9RHOB (OmpR/PhoB-type domain-containing protein n=1 Tax=Marivita cryptomonadis TaxID=505252 RepID=A0A1X4NY51_9RHOB)

HSP 1 Score: 343 bits (881), Expect = 5.460e-113
Identity = 172/278 (61.87%), Postives = 210/278 (75.54%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834
            IFTQLVEA+T   +W DRFDG   +IF+LQD VA  VA ALEP+LIWAEAAR  +KPT +L AYDLC++AAPLV RQNTL SL EGL+LL ++LALDP Y++AK L CYAHTG+ A RWWTFEQA+A LP+AREVLD+  +DP ALA  GH+IAY+G E   GL ++ RA  LNPNSAT+A+ LGWVHNYLS ++ AI  L RA RISPLHP+IGV + GI NA FQ   ++ A   YE+AL++YPEFA+  LGLM  Y   G+ E+SA+MA   R K
Sbjct:  190 IFTQLVEAKTARMIWHDRFDGSTEDIFDLQDTVAACVAGALEPKLIWAEAARLHSKPTDNLQAYDLCMKAAPLVMRQNTLSSLEEGLELLNRSLALDPDYVRAKGLYCYAHTGSFAARWWTFEQAQAGLPMAREVLDSGTDDPFALAAAGHHIAYIGQEPETGLISVTRANALNPNSATIALFLGWVHNYLSNDDQAIEHLERAIRISPLHPNIGVTTCGIANAYFQKQDLETAIRYYEEALTQYPEFASTQLGLMGCYLKAGKLEKSAQMATWFRNK 467          
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Match: UPI001FF34AF2 (winged helix-turn-helix domain-containing protein n=1 Tax=Marivita sp. S6314 TaxID=2926406 RepID=UPI001FF34AF2)

HSP 1 Score: 343 bits (881), Expect = 5.460e-113
Identity = 171/278 (61.51%), Postives = 215/278 (77.34%), Query Frame = 1
Query:    1 IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEAARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAYLQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCGHYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAELRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFATIHLGLMAIYWALGRKEESARMAEILRRK 834
            IFTQLVEA+T   +W++RFDG   +IF+LQD VAE VA A+EP+LIWAEAARAQ KPT SLAAYDLC+RA PLV RQNTL  L EG+ LL QALALDP + +AK L C+AHTG+ ATRWW FE+A+AALP+A+ +LD+  ED  ALA  GHYIAY+G +  +GL A++RA  LNPNSATV +LLGWV+NYLSE++ AI  L+RA RISP+HP+IGV + GI NA FQ   +  A + YE+A+++YPEFA+I LG++  YW LG  E+SA+MA   R K
Sbjct:  190 IFTQLVEAKTARMIWQERFDGTTEDIFDLQDTVAESVAGAIEPKLIWAEAARAQHKPTESLAAYDLCMRATPLVMRQNTLSDLEEGMALLDQALALDPRFDRAKGLYCFAHTGSFATRWWPFEKAQAALPVAQSLLDSGTEDAFALAAAGHYIAYIGQDLHKGLIAVKRAYALNPNSATVCLLLGWVYNYLSEDDDAIMHLQRAARISPVHPNIGVTTCGIANAFFQKQDLKRAISYYEEAITQYPEFASIQLGMIGCYWKLGDLEKSAQMAAWFRNK 467          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10114.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9HUZ6_9RHOB2.780e-191100.00OmpR/PhoB-type domain-containing protein n=3 Tax=R... [more]
A0A238KIQ5_9RHOB3.880e-16385.61Transcriptional regulator HilA n=1 Tax=Maliponia a... [more]
A0A5F1P4B3_9RHOB8.670e-14175.18Adenylate cyclase n=2 Tax=Tabrizicola TaxID=144391... [more]
UPI000A1EFE0C6.490e-13370.50winged helix-turn-helix domain-containing protein ... [more]
A0A316KSH9_9RHOB2.250e-12868.71OmpR/PhoB-type domain-containing protein n=1 Tax=M... [more]
A0A8J7WEU7_9RHOB1.480e-12567.63Winged helix-turn-helix domain-containing protein ... [more]
A0A1M5W6X9_9RHOB5.130e-11962.23TolB amino-terminal domain-containing protein n=1 ... [more]
A0A1B6YN95_9RHOB4.120e-11461.82OmpR/PhoB-type domain-containing protein n=1 Tax=J... [more]
A0A1X4NY51_9RHOB5.460e-11361.87OmpR/PhoB-type domain-containing protein n=1 Tax=M... [more]
UPI001FF34AF25.460e-11361.51winged helix-turn-helix domain-containing protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10114contigC-australica_Contig_10114:3..839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog864069.MicloDRAFT_00015820
PFAMsGuanylate_cyc,TPR_16
Model size837
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.9e-48
EggNOG OGsCOG0457@1|root,COG2114@1|root,COG5616@1|root,COG0457@2|Bacteria,COG2114@2|Bacteria,COG5616@2|Bacteria,1MUMZ@1224|Proteobacteria,2TRUI@28211|Alphaproteobacteria,1JSYN@119045|Methylobacteriaceae
DescriptionPFAM Adenylate and Guanylate cyclase catalytic domain
Cds size837
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586747.4102325-CDS-C-australica_Contig_10114:2..8391682586747.4102325-CDS-C-australica_Contig_10114:2..839Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10114 3..839 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10114.1.1prot_C-australica_Contig_10114.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10114 3..839 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10114.1.1

>prot_C-australica_Contig_10114.1.1 ID=prot_C-australica_Contig_10114.1.1|Name=mRNA_C-australica_Contig_10114.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=279bp
IFTQLVEAETGHTLWRDRFDGQASEIFELQDRVAEHVAAALEPRLIWAEA
ARAQAKPTASLAAYDLCLRAAPLVYRQNTLDSLAEGLDLLRQALALDPAY
LQAKALICYAHTGAVATRWWTFEQARAALPLAREVLDTNPEDPLALAYCG
HYIAYVGGETRRGLTALQRAKVLNPNSATVAMLLGWVHNYLSENEAAIAE
LRRARRISPLHPDIGVISAGIGNALFQMGKIDEAAAQYEQALSEYPEFAT
IHLGLMAIYWALGRKEESARMAEILRRKA
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mRNA from alignment at C-australica_Contig_10114:3..839-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10114.1.1 ID=mRNA_C-australica_Contig_10114.1.1|Name=mRNA_C-australica_Contig_10114.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=837bp|location=Sequence derived from alignment at C-australica_Contig_10114:3..839- (Chrysoparadoxa australica CS_1217)
ATCTTTACCCAATTGGTCGAGGCGGAAACCGGGCATACGCTGTGGCGGGA CCGGTTCGACGGGCAGGCCAGTGAGATATTCGAGTTGCAGGACCGGGTGG CGGAACATGTCGCCGCCGCGCTGGAACCGCGGCTGATCTGGGCCGAAGCG GCGCGGGCGCAGGCCAAGCCCACCGCCAGCCTTGCCGCCTATGATCTTTG CCTGCGTGCCGCGCCGTTGGTGTACCGGCAGAACACGCTGGACAGCTTAG CCGAGGGGCTGGACCTGCTGCGGCAGGCGCTGGCGCTGGACCCGGCGTAT TTGCAGGCCAAGGCACTGATTTGTTACGCCCATACCGGGGCGGTGGCGAC ACGCTGGTGGACGTTTGAGCAGGCGCGGGCCGCGCTGCCGCTGGCGCGAG AGGTGCTGGACACCAACCCTGAAGACCCGCTGGCACTGGCCTATTGCGGG CATTACATCGCCTATGTGGGCGGCGAGACGCGGCGCGGGTTGACGGCATT GCAGCGGGCCAAGGTGCTGAACCCCAATTCAGCGACGGTGGCGATGCTGC TGGGTTGGGTTCACAACTATCTCAGCGAAAACGAGGCGGCGATTGCGGAA CTGCGCCGGGCCCGCCGGATCAGCCCGCTGCATCCGGATATCGGGGTCAT TTCGGCGGGCATCGGCAATGCGTTGTTCCAGATGGGCAAGATTGACGAGG CGGCGGCGCAGTACGAACAGGCGTTGAGCGAATACCCCGAGTTTGCGACC ATTCATCTGGGTCTGATGGCGATCTACTGGGCGCTGGGCCGCAAAGAAGA GTCGGCCCGGATGGCAGAGATCCTGCGCCGCAAGGCA
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Coding sequence (CDS) from alignment at C-australica_Contig_10114:3..839-

>mRNA_C-australica_Contig_10114.1.1 ID=mRNA_C-australica_Contig_10114.1.1|Name=mRNA_C-australica_Contig_10114.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=837bp|location=Sequence derived from alignment at C-australica_Contig_10114:3..839- (Chrysoparadoxa australica CS_1217)
ATCTTTACCCAATTGGTCGAGGCGGAAACCGGGCATACGCTGTGGCGGGA
CCGGTTCGACGGGCAGGCCAGTGAGATATTCGAGTTGCAGGACCGGGTGG
CGGAACATGTCGCCGCCGCGCTGGAACCGCGGCTGATCTGGGCCGAAGCG
GCGCGGGCGCAGGCCAAGCCCACCGCCAGCCTTGCCGCCTATGATCTTTG
CCTGCGTGCCGCGCCGTTGGTGTACCGGCAGAACACGCTGGACAGCTTAG
CCGAGGGGCTGGACCTGCTGCGGCAGGCGCTGGCGCTGGACCCGGCGTAT
TTGCAGGCCAAGGCACTGATTTGTTACGCCCATACCGGGGCGGTGGCGAC
ACGCTGGTGGACGTTTGAGCAGGCGCGGGCCGCGCTGCCGCTGGCGCGAG
AGGTGCTGGACACCAACCCTGAAGACCCGCTGGCACTGGCCTATTGCGGG
CATTACATCGCCTATGTGGGCGGCGAGACGCGGCGCGGGTTGACGGCATT
GCAGCGGGCCAAGGTGCTGAACCCCAATTCAGCGACGGTGGCGATGCTGC
TGGGTTGGGTTCACAACTATCTCAGCGAAAACGAGGCGGCGATTGCGGAA
CTGCGCCGGGCCCGCCGGATCAGCCCGCTGCATCCGGATATCGGGGTCAT
TTCGGCGGGCATCGGCAATGCGTTGTTCCAGATGGGCAAGATTGACGAGG
CGGCGGCGCAGTACGAACAGGCGTTGAGCGAATACCCCGAGTTTGCGACC
ATTCATCTGGGTCTGATGGCGATCTACTGGGCGCTGGGCCGCAAAGAAGA
GTCGGCCCGGATGGCAGAGATCCTGCGCCGCAAGGCA
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