prot_C-australica_Contig_1010.2.3 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1010.2.3
Unique Nameprot_C-australica_Contig_1010.2.3
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length1217
Homology
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: A0A7H0XLR9_PHYCI (Zinc finger domain-containing protein-like protein (Fragment) n=1 Tax=Phytophthora cinnamomi TaxID=4785 RepID=A0A7H0XLR9_PHYCI)

HSP 1 Score: 67.8 bits (164), Expect = 1.530e-7
Identity = 69/213 (32.39%), Postives = 82/213 (38.50%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGASAAERAERALSFSFSLPSERVQGRKSSTYGAGQDKVTPFQFMPPAQSV---------PSARQKTSKSKAVVKAPVPVVKEKTPAVPTPTPEKEIEKKPLGFDMSKFGPKPGQWKCPACSVVNEKTSVKCVACETDKPQXXXXXXXXXSKASAPGEKTGAEAVTTKQGPQPVEQKAPLLGALGPGGFSFTAP 579
            GEF FT P  I  +     D   A  R   +   S   P  +   +KS+    G     PF F+P +  V         P A++      A  K   P   EK     +  P       PL   M     KPGQWKCP CSV+NE TS KC  CET  P            A AP EK  A A            KAP  G++   GFSF AP
Sbjct:  541 GEFTFTLPIRIKGAQQVDADDEDARVRFMFSPPPSMREPPMKASSQKSTAKANG--GAAPFDFVPSSPKVKTTEWVSKPPKAKEPEKPKAAAKKXXXPKEAEKLSTTASVPPSANGAVNPLARFMQL---KPGQWKCPGCSVLNEATSAKCPCCETANP------------AGAPAEKAAAPAA-----------KAP--GSISSSGFSFGAP 723          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: A0A3R7IG11_9STRA (RanBP2-type domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IG11_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 9.610e-7
Identity = 61/162 (37.65%), Postives = 72/162 (44.44%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGASAAERAERALSFSFSLP-SERVQGRKSS----TYGAGQDKVTPFQFMPPAQSVPSARQKTSKSKAVVKAPVPVVKEKTPAVPTPTPEKEIEKKPLGFDMSKFGP-------KPGQWKCPACSVVNEKTSVKCVACETDKP 525
            G+F FT P S      E+     A E   R + F FS P S R    K+S    T  A  +   PF FMP +  V +    TSK  A  K     V EK  + P  T +K  E        S   P       KPGQWKCP CSV+NE TS KC  CET +P
Sbjct:  553 GQFTFTLPIST-----EMSKKIDADEEDNR-VRFIFSPPPSLREPPVKTSSQKATSKAKANSAAPFDFMPSSPKVKTTEW-TSKPPAAKKHETLKVVEKKTSTPKETEQKSSESSVPVASNSAVNPLARFMQLKPGQWKCPGCSVLNEATSAKCPCCETAQP 707          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: H3GFT0_PHYRM (RanBP2-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFT0_PHYRM)

HSP 1 Score: 63.5 bits (153), Expect = 2.820e-6
Identity = 62/189 (32.80%), Postives = 75/189 (39.68%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGASAAERAERALSFSFSLPSER----VQGRKSSTYGAGQDKVTPFQFMPPAQSVPSAR--QKTSKSKAVVKAPVPVVKEKTPAVPTPTPEKEIEK----------------KPLGFDMSKFGPKPGQWKCPACSVVNEKTSVKCVACETDKPQXXXXXXXXXSKASAPG 542
            G+F FT P ++     E     SA +   R L F FS P+      V+     T   G     PF FMP +  V +     K  K+K   K     V  KTPA P     K +EK                 PL   M     KPGQWKCP CSV+NE TS KC  CET  P          + +  PG
Sbjct:  253 GQFKFTLPINV-----EGAQQVSADDEDSRVL-FVFSPPASMREPPVKASSQKTAAKGNGGAAPFDFMPSSPKVKTTEWVSKPPKAKESEKL---TVAAKTPAAP-----KGVEKPSSTGPASVASMSGAVNPLARFMQL---KPGQWKCPGCSVLNEATSAKCPCCETANPGGASAKVAGPAASKTPG 424          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: H3GEE2_PHYRM (RanBP2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GEE2_PHYRM)

HSP 1 Score: 63.5 bits (153), Expect = 2.830e-6
Identity = 62/189 (32.80%), Postives = 75/189 (39.68%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGASAAERAERALSFSFSLPSER----VQGRKSSTYGAGQDKVTPFQFMPPAQSVPSAR--QKTSKSKAVVKAPVPVVKEKTPAVPTPTPEKEIEK----------------KPLGFDMSKFGPKPGQWKCPACSVVNEKTSVKCVACETDKPQXXXXXXXXXSKASAPG 542
            G+F FT P ++     E     SA +   R L F FS P+      V+     T   G     PF FMP +  V +     K  K+K   K     V  KTPA P     K +EK                 PL   M     KPGQWKCP CSV+NE TS KC  CET  P          + +  PG
Sbjct:  520 GQFKFTLPINV-----EGAQQVSADDEDSRVL-FVFSPPASMREPPVKASSQKTAAKGNGGAAPFDFMPSSPKVKTTEWVSKPPKAKESEKL---TVAAKTPAAP-----KGVEKPSSTGPASVASMSGAVNPLARFMQL---KPGQWKCPGCSVLNEATSAKCPCCETANPGGASAKVAGPAASKTPG 691          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: A0A662YEZ4_9STRA (RanBP2-type domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEZ4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.110e-6
Identity = 59/174 (33.91%), Postives = 81/174 (46.55%), Query Frame = 0
Query:  376 GEFNFTCP---DSIVASTFELEDGASAAERAERALSFSFSLPSE------RVQGRKSSTYGAGQDKVTPFQFMPPAQSVPSARQKTSKSKAVVKAPVPVVKEKT-PAVPTPTPEKEIEK---KPLG----------FDMSKFGP-KPGQWKCPACSVVNEKTSVKCVACETDKP 525
            G+F FT P   +    +  E EDG          + F+FS P        +V  +K+++ G G     PF F+P +  +        + + + KAP P   EK  PA+  PT  KE EK   KP              +++F   KPGQWKCP CSV+NE TS KC  CET +P
Sbjct:  572 GQFTFTLPLQSERAQKTGAEDEDGR---------VQFAFSPPPAMREPPMKVPSQKTASKGKG--GAAPFDFVPTSPKM--------RMEWLSKAPTPKEPEKQKPALKNPTVPKETEKASAKPAAPAATLANGAVNPLARFMQLKPGQWKCPGCSVLNEATSAKCPCCETAQP 726          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: A0A6A3WT24_9STRA (RanBP2-type domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WT24_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.910e-6
Identity = 62/181 (34.25%), Postives = 71/181 (39.23%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGASAAERAERALSFSFSLP-SERVQGRKSS---TYGAGQDKVTPFQFMPPAQSV--------PSARQKTSKSKAVVKAPVPVVKEKTPA--VPTPTPEKEIEKKPLGFDMSKFGPKPGQWKCPACSVVNEKTSVKCVACETDKPQXXXXXXXXXSKASAPG 542
            GEF FT P  I  +T    D      R      F+FS P S R    K+S   T         PF FMP +  V        P   ++  K KA  K          P+  V  P         PL   M     KPGQWKCP CSV+NE TS KC  CET KP          + A APG
Sbjct:  533 GEFTFTLPIRIEGATQVDADDEDTRVR------FTFSPPPSLREPPMKTSSQKTAAKANGGAAPFDFMPSSPKVKTTEWVSKPPKAKEPEKPKAAAKXXXXXXXXXXPSTTVSVPATSTNGAVNPLARFMQL---KPGQWKCPGCSVLNEGTSAKCPCCETAKPGGAPAEKKTAAMAKAPG 704          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: D0MTL4_PHYIT (RanBP2-type domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MTL4_PHYIT)

HSP 1 Score: 62.0 bits (149), Expect = 8.310e-6
Identity = 69/226 (30.53%), Postives = 91/226 (40.27%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGAS--AAERAERALSFSFSLPSE------RVQGRKSSTYGAGQDKVTPFQFMPPAQSVPSARQKTSKSKAVVKAPVPVVKEKTPAVPTPTPEKEIEKKPLGFD-------------MSKFGP-KPGQWKCPACSVVNEKTSVKCVACETDKPQXXXXXXXXXSKASAPGEKTGAEAVTTKQGPQPVEQKAPLLGALGPGGFSFTAP 579
            GEF FT P  +        DG +       +  + F FS P +      +V  +K++  G G     PF FMP +        KT  ++   K P     EK  A   P   K+  +KP   D             +++F   KPGQWKCP CSV+NE TS KC  CET  P          + ASAP        VT     +P        G++   GFSF AP
Sbjct:  320 GEFKFTLPHRV--------DGVNQVGVNDEDTRVKFVFSPPPKMREPPVKVSSQKTAANGIG---AAPFDFMPSSP-------KTKTTEWASKPPKTKESEKPKAAEKPVAPKDETEKPSTVDSAPAASTNGVVNPLARFMQLKPGQWKCPGCSVLNEATSAKCPCCETANP----------AGASAP-------KVTAPLASKPA-------GSISSSGFSFGAP 503          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: A0A833TI51_PHYIN (RanBP2-type domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TI51_PHYIN)

HSP 1 Score: 62.0 bits (149), Expect = 8.780e-6
Identity = 69/226 (30.53%), Postives = 91/226 (40.27%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGAS--AAERAERALSFSFSLPSE------RVQGRKSSTYGAGQDKVTPFQFMPPAQSVPSARQKTSKSKAVVKAPVPVVKEKTPAVPTPTPEKEIEKKPLGFD-------------MSKFGP-KPGQWKCPACSVVNEKTSVKCVACETDKPQXXXXXXXXXSKASAPGEKTGAEAVTTKQGPQPVEQKAPLLGALGPGGFSFTAP 579
            GEF FT P  +        DG +       +  + F FS P +      +V  +K++  G G     PF FMP +        KT  ++   K P     EK  A   P   K+  +KP   D             +++F   KPGQWKCP CSV+NE TS KC  CET  P          + ASAP        VT     +P        G++   GFSF AP
Sbjct:  527 GEFKFTLPHRV--------DGVNQVGVNDEDTRVKFVFSPPPKMREPPVKVSSQKTAANGIG---AAPFDFMPSSP-------KTKTTEWASKPPKTKESEKPKAAEKPVAPKDETEKPSTVDSAPAASTNGVVNPLARFMQLKPGQWKCPGCSVLNEATSAKCPCCETANP----------AGASAP-------KVTAPLASKPA-------GSISSSGFSFGAP 710          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: G4Z231_PHYSP (RanBP2-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z231_PHYSP)

HSP 1 Score: 61.6 bits (148), Expect = 1.080e-5
Identity = 68/214 (31.78%), Postives = 79/214 (36.92%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGASAAERAERALSFSFSLPSERVQGRKSSTYGAGQDKVTPFQFMPPAQSV---------PSARQKTSKSKAVVKAPVPVVKEKTPAVPT-PTPEKEIEKKPLGFDMSKFGPKPGQWKCPACSVVNEKTSVKCVACETDKPQXXXXXXXXXSKASAPGEKTGAEAVTTKQGPQPVEQKAPLLGALGPGGFSFTAP 579
            GEF FT P  I        D      R     S   SL    ++     T   G     PF FMP +  V         P A++      A  K   P   +K  A  + P         PL   M     KPGQWKCP CSV+NE TS KC  CET KP              AP EK  A A            +AP  G++   GFSF AP
Sbjct:  328 GEFTFTLP--IRTEGVNQADANDEDTRVRFMFSPPPSLRDPPLKVSSHKTTAKGNAGAAPFDFMPSSPKVKTTEWVSKAPKAKEPEKPKAAAKKVTAPKDADKPSATASAPATSTNGAVNPLARFMQL---KPGQWKCPGCSVLNEATSAKCPCCETAKP------------GGAPAEKAAAPAA-----------EAP--GSISSRGFSFGAP 511          
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Match: M4C3B9_HYAAE (RanBP2-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3B9_HYAAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.160e-5
Identity = 68/220 (30.91%), Postives = 86/220 (39.09%), Query Frame = 0
Query:  376 GEFNFTCPDSIVASTFELEDGASAAERAERALSFSFSLPSERVQGRKSSTYGAGQDKVTPFQFMPPAQSV-----PSARQKTSKSKAVVKAPVPVVKEKTP----AVPTPTPEKEIEKKPLGFDMSKFGPKPGQWKCPACSVVNEKTSVKCVACETDKPQXXXXXXXXXSKASAP----------GEKTGAEAVTTKQGPQPVEQKAPLLGALGPGGFSF 576
            G F FT P  I        D      R   +   S   P  +V  +K++   +G     P    P A++      PS  +K  K+KAV + PV V +   P    A  TP         PL   M     KPGQWKCP CSV+NE  S KC  CET +P          +   A           G+ T A AV  K   +PV       G + P GFSF
Sbjct:  576 GGFEFTLPLHIEGVKLAGADDEDTRVRFVFSPPPSLRKPPVKVFNQKNTQDDSG---AIPLASAPEAKATEGVSNPSKVEKLDKTKAVAEKPVAVAEVTKPSTDIAAATPAASLSGAVNPLARFMQL---KPGQWKCPGCSVLNEAASAKCPCCETARPDGGAAEKACTALPKAIENRTSSGFGFGQATEATAVAQKGAAKPV------AGTITPSGFSF 783          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1010.2.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A7H0XLR9_PHYCI1.530e-732.39Zinc finger domain-containing protein-like protein... [more]
A0A3R7IG11_9STRA9.610e-737.65RanBP2-type domain-containing protein n=4 Tax=Phyt... [more]
H3GFT0_PHYRM2.820e-632.80RanBP2-type domain-containing protein n=2 Tax=Phyt... [more]
H3GEE2_PHYRM2.830e-632.80RanBP2-type domain-containing protein n=1 Tax=Phyt... [more]
A0A662YEZ4_9STRA3.110e-633.91RanBP2-type domain-containing protein n=2 Tax=Noth... [more]
A0A6A3WT24_9STRA3.910e-634.25RanBP2-type domain-containing protein n=5 Tax=Phyt... [more]
D0MTL4_PHYIT8.310e-630.53RanBP2-type domain-containing protein n=1 Tax=Phyt... [more]
A0A833TI51_PHYIN8.780e-630.53RanBP2-type domain-containing protein n=1 Tax=Phyt... [more]
G4Z231_PHYSP1.080e-531.78RanBP2-type domain-containing protein n=1 Tax=Phyt... [more]
M4C3B9_HYAAE1.160e-530.91RanBP2-type domain-containing protein n=1 Tax=Hyal... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableGENE3D4.10.1060.10coord: 491..532
e-value: 1.2E-10
score: 42.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 706..724
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..559
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1044..1216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 518..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..810
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 783..807
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..493
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 420..456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1044..1173
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 499..523
e-value: 2.3E-6
score: 37.1
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 497..526
e-value: 3.7E-10
score: 38.9
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 501..520
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 497..526
score: 10.985822
IPR026054Nuclear pore complex proteinPANTHERPTHR23193NUCLEAR PORE COMPLEX PROTEIN NUPcoord: 44..1024
coord: 926..1206
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 498..525

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1010contigC-australica_Contig_1010:3073..11144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1010.2.3mRNA_C-australica_Contig_1010.2.3Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1010 3058..15323 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1010.2.3 ID=prot_C-australica_Contig_1010.2.3|Name=mRNA_C-australica_Contig_1010.2.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1217bp
MRDKQLDNLLENAAESEHDRDRLLAALARAVKEPGAATSQPRKPTPSRPI
VRAQRPTRAAAEKRATFGGEERRTAGAYGTLYSSPHSRASPARYRSSLGP
EDGGEFVRRREGRIRKLSGMLGEDHQRWSTRPSHSSDRSSHRTSDIGHDY
LASESWSHRHGGGDDWEAWEHRRDYGRVRGGVDYQRQQQQHWAGDGPRLK
RQRAQPSEASEQPGGLLQARDADESETPQSSAHSAKRILEALGELSSPLL
DARSRGLPLLSSTRTAAAMPSAYRPAQGSRSPPPSRSLHMPPPSGASKLA
ALELPSPGFAVDSAEGFTEQPIKSSLDITLPPLIKAPSPKSAASPSLDKP
VEDEDEVEVTEEKPPAKKKRVRTGDGEFNFTCPDSIVASTFELEDGASAA
ERAERALSFSFSLPSERVQGRKSSTYGAGQDKVTPFQFMPPAQSVPSARQ
KTSKSKAVVKAPVPVVKEKTPAVPTPTPEKEIEKKPLGFDMSKFGPKPGQ
WKCPACSVVNEKTSVKCVACETDKPQDKPQDKPQDSKASAPGEKTGAEAV
TTKQGPQPVEQKAPLLGALGPGGFSFTAPAAASPAPATVTAAVKMGSSVA
AAAPGGFGGFTFGAPAPALPVPTVADSPAPAPVPAPELATVPVPSPASAT
EASGGTTEPPKAAFSFGAKPAQASASVGVLASTQTSDISTPSTGEDGANK
SAPTSAPAPAPAPAPAPAPAPAPAPLFSFGASAATPAPAPMGATATSDTA
SDGSEERARKRPAATSTATATAAVSMPPPASVMPSFTAAPLPTPAPTPAP
TPGAPVSPAPVKGFTFTAGLGTSAPPAAAPAAPGSTSAPAFTFGASAPAP
EAATAARTASPFTTSPVGNTFGAPSPTASPFAAAGAAAAAGATASNAAPT
RTASPFATATGAGADIAAPGLNAPLRTASPFGATDAAAASSAPARTASPF
TSSDSKVGPGFTFGAAATPAPTFGAAAAAGGATAAASGPSFTFGATAAPA
PAAAAPAPGPGPSFTFGAAPAPAAAPQVPAPTFSFGATSQPQAASTTVFG
SAPADKSSTGMSMNDGMSNSGSAGGGMQFGSSGFGATQPLQAPLFGQQQQ
QQQPPQAGAFGQQPQPAFGQQQQQQPQQQMFGAQSGFGQQPQQPQPAFGQ
QPQQPQQFGFGQQPIQQPIQQGFGAAQAAAGGFGGGGGGFSLGKEEKKNA
QGRRIRKAKRPGARRT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR026054Nucleoporin
IPR036443Znf_RanBP2_sf