mRNA_C-australica_Contig_101.7.2 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_101.7.2
Unique NamemRNA_C-australica_Contig_101.7.2
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A4P5YSZ9_9BACT (BPL_N domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5YSZ9_9BACT)

HSP 1 Score: 124 bits (311), Expect = 8.740e-28
Identity = 89/260 (34.23%), Postives = 127/260 (48.85%), Query Frame = 3
Query:   42 PSLDDGGGTSLVCYRCSGAQLPVVLTAPHGGNAEF-------GHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIK------PGVG--EEEVSGYKGGHTVHRH---AGRGIDAVQLEFGSSLRASQARAEVGEKVAKAI 767
            P   +    +      +   LP++LTAPHGG A         G  + RF  +           D  T  L E++   L+Q  GK PY+V+ARFHR Y+DANR    P +    P  T    T+  YH +I    + + A  R  R +++DIHGQAS P  V  GT++G T     L + G   ++    L+G + +      P VG  + E   Y GGHTV RH   +G  IDA+QLE G+  R ++A  +V +K+A AI
Sbjct:   40 PDATNSQAVATAAMTVAAGGLPIILTAPHGGRAALPGVAERQGAGAARFNAK----------IDTNTDLLTEKLADALEQRLGKRPYVVIARFHRKYLDANRR---PEDAFESPAATA---TYEAYHAAIAAACQEVTA--RWGRGVVLDIHGQASQPGVVFRGTQNGKTV-AHLLQQSGRESVYGETSLFGQLARQGFAVFPAVGSSDPEEPSYSGGHTVGRHGSSSGGTIDALQLELGTKYRDAKALGDVADKLANAI 280          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A6C2YK43_9BACT (Uncharacterized protein n=1 Tax=Tuwongella immobilis TaxID=692036 RepID=A0A6C2YK43_9BACT)

HSP 1 Score: 115 bits (288), Expect = 5.130e-26
Identity = 73/234 (31.20%), Postives = 120/234 (51.28%), Query Frame = 3
Query:   99 QLPVVLTAPHGGNAEFGHQSTRF-LPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREG-------EGFLWHLRQLYGGVIKPGVGEEEVSGYKGGHTVHR---HAGRGIDAVQLEFGSSLRASQARAEVGEKVAKAI 767
            ++P++LTAPHGG  E  +   R  +       G  T  D GT +L+ ++   +++  GK PY++ ARFHR +ID NR  ++  E         A+  + ++H S+    + ++   + QR LL+D+HGQ S   ++  GT++G T  +  + R G       E F   L + +G  + P    +E +G+ GG+ V     H G GIDA+QLE G+  R    R    EK+A ++
Sbjct:   44 EIPIILTAPHGGTLELPNVPERKGIGLEKGAKGFFTGRDTGTEELVADLSAAIEKRFGKKPYLIAARFHRKFIDPNRPPEIAYE------SPNAKPFYDQFHDSVADACKQVQG--KFQRGLLLDLHGQGSKRDTIFRGTQNGKTVKL-LIDRYGKKAQVGPESFFGFLAK-HGCTVYPTDDGKEQAGFTGGYIVQTYGSHTGYGIDAIQLECGADYRLKDVRKPAAEKIADSV 267          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A3N5WKQ0_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WKQ0_9PROT)

HSP 1 Score: 114 bits (284), Expect = 2.850e-25
Identity = 89/271 (32.84%), Postives = 125/271 (46.13%), Query Frame = 3
Query:   18 RNFLPLQLPSL-DDGGGTSLVCYRCSGAQLPVVLTAPHGGNAEFGH------QSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIKPGVG-----------EEEVSGYKGGHTVHR---HAGRGIDAVQLEFGSSLRASQARAEVGEKVAKAI 767
            R  L L L +L   GG  +         +LPV++ APHGG A+            RF+ RPD            T +L + I  +L++LTG++PY+V+ARFHR +IDANR    P E     GC    +    YH  + R V  I+A  +  + +L DIHGQ+++  ++L GTR G T     L R G   +     ++G     G               E   Y GG+TV R   H   GIDA+QLEFG   R +       +  A+AI
Sbjct:   54 RVLLALWLAALLPAGGALARDLVHAEAGELPVIIAAPHGGRADVPGCEVRTATGKRFVNRPDH----------NTDRLAQVIAAELKRLTGQAPYLVIARFHRKFIDANRS---PEEAYGAEGCAADYDD---YHAVLRRNVDDIRA--KHPQAMLFDIHGQSAYRDAILRGTRHGETV-TRLLARAGAAAVTGPDSVFGRFAAMGYAIVPSNDTALTDRVEAKNYIGGYTVARYGSHRADGIDAMQLEFGRDFRNNDNVERTAQDAAQAI 305          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A142WPH4_9PLAN (BPL_N domain-containing protein n=1 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WPH4_9PLAN)

HSP 1 Score: 114 bits (286), Expect = 1.900e-24
Identity = 78/235 (33.19%), Postives = 118/235 (50.21%), Query Frame = 3
Query:   99 QLPVVLTAPHGGNAEFGHQSTRFLPRPDDMPG-VRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGF------LWHLRQLYGGVIKPGVGE-EEVSGYKGGHTVHRHAGR--GIDAVQLEFGSSLRASQARAEVGEKVAKAIYH 773
            +LP+V++APHGGN E      R        PG   T  D GT +L + +   ++   GK PY+V +R HR Y+D NR  D   E         A   + +YH +++ C R+++      R LL+D+HGQ S  ++V  GT++G T  +    R GE        L  L +  G  + P   E  E  G+ GG+ V  ++G   G+DA+QLEFG+  R   AR +    +A+A +H
Sbjct:   48 ELPIVISAPHGGNREVPGSHPRTGEGQVAAPGKFGTARDGGTEELAQLVSKAVEARFGKKPYLVASRAHRRYVDPNRPADAAFEDPA------AERVYRQYHDTLEGCCRTVRK--EFGRGLLLDLHGQGSKANTVFRGTQNGKTVAL-LRERFGEPAHSGPESLTGLLKGRGWTMHPDPFEGREQGGFTGGYIVQTYSGEPFGLDAIQLEFGNDYRKPDAREQTARDLAEAAFH 273          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A517Y0K4_9BACT (N-formylglutamate amidohydrolase n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517Y0K4_9BACT)

HSP 1 Score: 109 bits (273), Expect = 4.660e-24
Identity = 84/247 (34.01%), Postives = 118/247 (47.77%), Query Frame = 3
Query:  102 LPVVLTAPHGGNAEF-GHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHRE-----------------GEGFLWHLRQLYGGVIKPGVGEEEVSGYKGGHTVHRHAGR-GIDAVQLEFGSSLRASQARAEVGEKVAKAI--YHHL 779
            +PV+++APHGG  E  G  + R +  P    G  T  D GT +L   +  ++   TGK PY+V ARF R Y+DANR  DV  E         A+  +  YH ++    + ++      R LL+D+H QA+ P SV+ GT+DG T  V  L +                  G GF  H  +L G         +E   + GG+ V  ++G  G+DAVQLEFG  L    +  E   KVA AI  +H L
Sbjct:   41 MPVIISAPHGGTGEIPGVPTRRGVGLPTGPNGFYTGRDPGTEELAATLAVEVFLKTGKRPYLVTARFSRRYVDANRPADVAYE------SPRAKPVYDAYHDTLAGFCKEVRKV--HGRGLLLDVHNQATFPDSVVRGTQDGKT--VALLRQRFGEKAHCGPDSLLGLLGGAGFKTHPAKLDG---------KEHDNFNGGYIVRTYSGDYGLDAVQLEFGWMLTTPVSAPETAGKVAAAIDQFHRL 268          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A5C5ZL51_9BACT (BPL_N domain-containing protein n=2 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C5ZL51_9BACT)

HSP 1 Score: 114 bits (285), Expect = 5.170e-24
Identity = 88/245 (35.92%), Postives = 126/245 (51.43%), Query Frame = 3
Query:  102 LPVVLTAPHGGNAEFGHQSTRFLPRPDDMPGVRTLA---DVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIKPGVG--------EEEVSGYKGGHTVHRH-AGRG--IDAVQLEFGSSLRASQARAEVGEKVAKAIYHHLQPLAP 794
            LP++L+APHGGN          LPR     GVR+ +   D GT +L  +  G L++ TGK PY+VVA FHR ++DANR  +   E        E+   +  YH ++ +  + +    R  R LL+DIHGQ+  P ++L GT +G T     + R G   L   R L G + +  +         E E S Y GG  V ++ +G+G  +DA+QLE G +LR+  AR  V EK+A AI    Q   P
Sbjct:   47 LPIILSAPHGGNELI----PGALPRKGI--GVRSFSNTMDFGTKKLALQTAGALERQTGKRPYIVVASFHRKFVDANRSEERAYE------SEESARAYHAYHEALSQARQDV--IHRWGRGLLLDIHGQSEVPDAILRGTVNGRTT-THLVSRFGLESLIGDRSLLGQIAQQALSVVPEVDSAEREHSAYNGGFIVSKYGSGKGGTMDAIQLEVGRNLRSFDARPAVAEKMANAIASFAQEYMP 276          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A517T1J5_9BACT (BPL_N domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A517T1J5_9BACT)

HSP 1 Score: 113 bits (282), Expect = 1.250e-23
Identity = 78/234 (33.33%), Postives = 123/234 (52.56%), Query Frame = 3
Query:  102 LPVVLTAPHGGNAEFGHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANR-DVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIK------PGV--GEEEVSGYKGGHTVHRHA---GRGIDAVQLEFGSSLRASQARAEVGEKVAKAI 767
            LP++L+APHGG+      + R       +   R   D+ T  L +EI   LQ+ TGK PY+VVA+FHR Y DANR  +D    Y + P    A++ +  YH ++    R ++   R Q+ +L+DIHGQA++P ++  GT++G+T      H  G   L     L+G + K      P V   +++   Y GG+ V  +    G  +DA+QLE G  LR++   A   +++A A+
Sbjct:   36 LPIILSAPHGGSQAIAGAAERT---GQGVRQFRNRTDLNTGTLTQEIANALQRKTGKRPYLVVAKFHRKYADANRRPLDA---YESSP----AQQAYDAYHQALSDARRQVEY--RWQQGILLDIHGQAANPQAIYRGTQNGATVSHLLKHH-GRAALIGPGSLFGQLAKQDFPVVPNVDLADQDHPSYDGGYIVVTYGSDRGGTVDAIQLELGRDLRSADQLATTADRIANAL 256          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A2Z3GZA6_9BACT (Uncharacterized protein n=1 Tax=Gemmata obscuriglobus TaxID=114 RepID=A0A2Z3GZA6_9BACT)

HSP 1 Score: 108 bits (269), Expect = 2.060e-23
Identity = 79/234 (33.76%), Postives = 116/234 (49.57%), Query Frame = 3
Query:  105 PVVLTAPHGGNAEFGHQSTRFLPRPDDMP----GVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIKPG-------VGEEEVSGYKGGHTVHRHAGR--GIDAVQLEFGSSLRASQARAEVGEKVAKAI 767
            PV+L+APHGG  +    S R   + D +P    G     D GT +L       + + TGK PY+VVA+FHR +IDANR  ++  E A      +A+ T+  Y  ++    R +K   R  R LL+DIHGQ     +V+ GT+DG T  +  + R GE         +G +   G       + ++E +   GG  V  +     GIDA+QLEFG   R + +R    +KVA A+
Sbjct:   51 PVILSAPHGGTKDVPGVSPR---KGDGLPVGGSGFFAGRDGGTEELAHATAAAIAKKTGKKPYLVVAQFHRKFIDANRPPEIAYEDA------KAKPTYDAYRGTLASYCREVKK--RYGRGLLLDIHGQGRMKDTVIRGTKDGKTVAL-LVQRYGEKAHTGPNSFFGLLAAGGYKVYPEKLADKEYATLSGGDIVQTYGSGDYGIDAIQLEFGGDFRDAASRTATADKVAAAV 272          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: UPI00112984AB (N-formylglutamate amidohydrolase n=1 Tax=Pseudorivibacter rhizosphaerae TaxID=2570323 RepID=UPI00112984AB)

HSP 1 Score: 107 bits (266), Expect = 3.340e-23
Identity = 80/245 (32.65%), Postives = 116/245 (47.35%), Query Frame = 3
Query:   93 GAQLPVVLTAPHGGNAEFGHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGV------IKPGVGE---EEVSGYKGGHTVH---RHAGRGIDAVQLEFGSSLRASQARAEVGEKVAKAIYHHLQPLA 791
            G  LP++LT PH G+   G    R +          T+ D+GT  L E++   L+Q     P +V+A+F R Y+DANR     AE        EA  T+  YH  + R V  ++     Q  LL+DIHGQ+  P++   GTR G T     + + G   +   + + GG+      + P +G    EE   + GGHTV     H  +GIDA+Q EFG + RAS + AE   +      +H   LA
Sbjct:   30 GGSLPLLLTVPHDGDESIGSVPVRTVGA--------TVRDLGTRPLAEKVASLLEQKLKARPRLVIAKFSRKYLDANR-----AEQDAMQS-PEALPTYQAYHAEVARHVSELRVAF-PQGALLLDIHGQSEDPNTTFRGTRAGLTVKA-LVQKHGIEAIQGEKSILGGLASKGYNVNPSLGSVSLEEDRRFAGGHTVFFYGSHRPQGIDAIQFEFGKNQRASWSLAEHFAEAITTFLNHYGYLA 258          
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Match: A0A1Z8ZVU7_9BACT (BPL_N domain-containing protein n=1 Tax=Verrucomicrobiaceae bacterium TMED86 TaxID=1986881 RepID=A0A1Z8ZVU7_9BACT)

HSP 1 Score: 110 bits (276), Expect = 3.540e-23
Identity = 79/241 (32.78%), Postives = 122/241 (50.62%), Query Frame = 3
Query:  102 LPVVLTAPHGGNAEFGHQSTRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHRMYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQRVLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVIK------PGVG-EEEVSGYKGGHTVHRH---AGRGIDAVQLEFGSSLRASQARAEVGEKVAKAIYHHLQPLAP 794
            LP+VL+APHGG+ +      R   +  D+       D+ T QL  ++   +++ TGK PY+VVA FHR +IDANR  D+  E        +A+  +  YH +I    R +    R  R +L D+HGQA+   ++  GT++G T     + + G+  L   + ++G   K      P +G E+  + Y GG+ V  +   +G  +DA+QLEFG  LR+ +   E   KVA AI    Q   P
Sbjct:   31 LPIVLSAPHGGSLKIEGVPER---KGQDVKRFVRTKDMWTDQLTVKLADSIEKKTGKRPYVVVANFHRKFIDANRSADLAYE------SPKAKPVYDSYHRAIASARREVLQ--RWGRGMLFDVHGQAAEAKAIFRGTQNGQTTSH-LVGKFGQEALSGEKSVFGLFAKESIAVIPDLGPEQRETRYTGGYIVRTYGSSSGGAMDAIQLEFGRELRSIENNDETARKVANAIVEFSQRYLP 259          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.7.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4P5YSZ9_9BACT8.740e-2834.23BPL_N domain-containing protein n=1 Tax=Verrucomic... [more]
A0A6C2YK43_9BACT5.130e-2631.20Uncharacterized protein n=1 Tax=Tuwongella immobil... [more]
A0A3N5WKQ0_9PROT2.850e-2532.84Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A142WPH4_9PLAN1.900e-2433.19BPL_N domain-containing protein n=1 Tax=Planctomyc... [more]
A0A517Y0K4_9BACT4.660e-2434.01N-formylglutamate amidohydrolase n=1 Tax=Urbifossi... [more]
A0A5C5ZL51_9BACT5.170e-2435.92BPL_N domain-containing protein n=2 Tax=Rhodopirel... [more]
A0A517T1J5_9BACT1.250e-2333.33BPL_N domain-containing protein n=2 Tax=Planctomyc... [more]
A0A2Z3GZA6_9BACT2.060e-2333.76Uncharacterized protein n=1 Tax=Gemmata obscuriglo... [more]
UPI00112984AB3.340e-2332.65N-formylglutamate amidohydrolase n=1 Tax=Pseudoriv... [more]
A0A1Z8ZVU7_9BACT3.540e-2332.78BPL_N domain-containing protein n=1 Tax=Verrucomic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_101contigC-australica_Contig_101:11957..13703 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog521674.Plim_0035
Model size1117
Max annot lvl203682|Planctomycetes
Hectar predicted targeting categoryother localisation
Exons9
Evalue8e-21
EggNOG OGs2DI2U@1|root,301UZ@2|Bacteria,2J0HD@203682|Planctomycetes
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-05_005540.1
Cds size1035
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_101.7.2prot_C-australica_Contig_101.7.2Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_101 12034..13698 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586744.2687564-UTR-C-australica_Contig_101:11956..120331682586744.2687564-UTR-C-australica_Contig_101:11956..12033Chrysoparadoxa australica CS_1217UTRC-australica_Contig_101 11957..12033 -
1682586744.3583357-UTR-C-australica_Contig_101:13698..137031682586744.3583357-UTR-C-australica_Contig_101:13698..13703Chrysoparadoxa australica CS_1217UTRC-australica_Contig_101 13699..13703 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586744.2780356-CDS-C-australica_Contig_101:12033..121461682586744.2780356-CDS-C-australica_Contig_101:12033..12146Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 12034..12146 -
1682586744.2865908-CDS-C-australica_Contig_101:12215..124971682586744.2865908-CDS-C-australica_Contig_101:12215..12497Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 12216..12497 -
1682586744.2948282-CDS-C-australica_Contig_101:12601..127471682586744.2948282-CDS-C-australica_Contig_101:12601..12747Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 12602..12747 -
1682586744.3034818-CDS-C-australica_Contig_101:12832..129371682586744.3034818-CDS-C-australica_Contig_101:12832..12937Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 12833..12937 -
1682586744.3120193-CDS-C-australica_Contig_101:13009..131081682586744.3120193-CDS-C-australica_Contig_101:13009..13108Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 13010..13108 -
1682586744.3207176-CDS-C-australica_Contig_101:13189..132901682586744.3207176-CDS-C-australica_Contig_101:13189..13290Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 13190..13290 -
1682586744.329666-CDS-C-australica_Contig_101:13354..134381682586744.329666-CDS-C-australica_Contig_101:13354..13438Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 13355..13438 -
1682586744.3403862-CDS-C-australica_Contig_101:13502..135611682586744.3403862-CDS-C-australica_Contig_101:13502..13561Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 13503..13561 -
1682586744.3502629-CDS-C-australica_Contig_101:13652..136981682586744.3502629-CDS-C-australica_Contig_101:13652..13698Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 13653..13698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_101.7.2

>prot_C-australica_Contig_101.7.2 ID=prot_C-australica_Contig_101.7.2|Name=mRNA_C-australica_Contig_101.7.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=345bp
MDYYRNFLPLQLPSLDDGGGTSLVCYRCSGAQLPVVLTAPHGGNAEFGHQ
STRFLPRPDDMPGVRTLADVGTAQLLEEIDGKLQQLTGKSPYMVVARFHR
MYIDANRDVDVPAEYATCPGCTEARETHLRYHYSIDRCVRSIKACCREQR
VLLIDIHGQASHPSSVLIGTRDGSTADVPYLHREGEGFLWHLRQLYGGVI
KPGVGEEEVSGYKGGHTVHRHAGRGIDAVQLEFGSSLRASQARAEVGEKV
AKAIYHHLQPLAPFIASLGVRCTSTLNSLSVFPNQSKIPRPPNEISSAIT
PMGRGEQGPRCWSAAEAGHHNSQRFIRVPPSQAPAAQGQASSLL*
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mRNA from alignment at C-australica_Contig_101:11957..13703-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_101.7.2 ID=mRNA_C-australica_Contig_101.7.2|Name=mRNA_C-australica_Contig_101.7.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1747bp|location=Sequence derived from alignment at C-australica_Contig_101:11957..13703- (Chrysoparadoxa australica CS_1217)
GCGGCATGGATTACTATCGCAACTTTCTCCCTCTTCAGTTGCCTTCGTTA GGTGAGGAAATCCCCTGGGCTTGGCGCAAAAAAGATGGGCCAAAGAAACG AAGGAGGAAAAAGCTTGACTTAACCCATTCCCGCTCCTCTAGACGATGGA GGAGGCACGAGCCTGGTGTGCTACAGGTGCTCAGGCGCTCAGCTCCCTGT GGTACGCAAGAGGGCTATTTGCATCCCTCCCTTGAGAGCTTACTAATCTC CTCTCCTTTTCACAGGTACTGACTGCTCCTCATGGCGGCAATGCTGAATT TGGCCATCAATCAACGAGGTTCCTGCCACGGCCAGATGACATGCCAGGGG TAGGGATTACAGGGATATCACCATAGAGAAGGATTGCAAAGGATTAACCC TCTCCAACTGTAGGTGCGCACGCTAGCTGATGTTGGTACAGCCCAGCTTC TTGAGGAAATCGACGGCAAACTCCAACAGCTGACTGGTAAATCGCCGTAC ATGGTTGTGGCAAGGTAAGGGAGCGGAATGCCAAAAAAAAAAGCTTCACT GTTTGATGCTGCTGCTGCTGCTGCTGCTGCTGTGCAACATGACAGGTTTC ACCGCATGTACATAGACGCCAACCGTGATGTGGATGTGCCAGCAGAGTAC GCAACCTGCCCTGGCTGCACCGAGGCAAGGGAGACGCATCTCAGGTGGTT AGCTCCCACAGGTCCTTACAGACAGGGAGGGTCTGGTTGACTTGTCACCT GTTCCTTGTGTCTCAGGTACCACTACAGCATTGACCGCTGTGTCCGCAGC ATTAAAGCGTGCTGCAGGGAGCAAAGGGTGCTGCTTATAGATATCCATGG CCAAGCGTCCCATCCTTCAAGGCATGAAGGAAAAAAAGACTGCACCTCGC CTACTCCTCGCCTTTACCTTCACCTTCTTTCTCTTGTTGTCTTTCCTCTC CTTTAGCGTGTTAATAGGGACGCGTGATGGCTCCACGGCTGATGTGCCGT ACCTGCATCGGGAAGGGGAGGGCTTTCTTTGGCACTTGCGGCAACTCTAC GGAGGTGTCATTAAGCCAGGCGTAGGAGAGGAGGAAGTCTCAGGTTACAA AGGTAGCAGTGCATTCATTCCACCTGTAGAGGAGATAAAGAGGGCTTGCC CTGATTGATTGATTCCTTAAATTTTTTTGATTTTTTTTTCTACCTCCCCT TCCCAGGTGGTCACACTGTTCATCGGCATGCAGGTCGTGGCATCGATGCC GTGCAGCTAGAGTTTGGCTCCTCACTGAGGGCATCACAAGCTAGGGCAGA AGTTGGGGAGAAGGTGGCCAAGGCTATATATCACCACTTGCAACCGTTAG CGCCTTTCATTGCGTCGCTGGGGGTAAGGTGCACAAGCACACTCAATTCG CTCTCAGTATTCCCCAACCAAAGTAAAATCCCCCGCCCACCAAATGAAAT TTCCTCAGCTATCACCCCCATGGGACGAGGAGAGCAAGGTGGGTGCTTTG CATTATCTTACTCTTCTCTTACTCTCTTGATTTGCGCTGACTTCCCCCTC CAATTAGGCCCGCGTTGTTGGAGCGCTGCAGAAGCTGGGCATCACAACTC CCAGCGATTTATTAGAGTTCCTCCCAGCCAAGCGCCAGCTGCTCAAGGAC AAGCTAGCTCTCTGCTCTGAGTTAGAGCTCTCAAACACGCTTTTGGATTC GCTGAGTGGAGCATGCACGCAAGTAACTAGCTCGCATCTCTAGCAGA
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Coding sequence (CDS) from alignment at C-australica_Contig_101:11957..13703-

>mRNA_C-australica_Contig_101.7.2 ID=mRNA_C-australica_Contig_101.7.2|Name=mRNA_C-australica_Contig_101.7.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1035bp|location=Sequence derived from alignment at C-australica_Contig_101:11957..13703- (Chrysoparadoxa australica CS_1217)
ATGGATTACTATCGCAACTTTCTCCCTCTTCAGTTGCCTTCGTTAGACGA
TGGAGGAGGCACGAGCCTGGTGTGCTACAGGTGCTCAGGCGCTCAGCTCC
CTGTGGTACTGACTGCTCCTCATGGCGGCAATGCTGAATTTGGCCATCAA
TCAACGAGGTTCCTGCCACGGCCAGATGACATGCCAGGGGTGCGCACGCT
AGCTGATGTTGGTACAGCCCAGCTTCTTGAGGAAATCGACGGCAAACTCC
AACAGCTGACTGGTAAATCGCCGTACATGGTTGTGGCAAGGTTTCACCGC
ATGTACATAGACGCCAACCGTGATGTGGATGTGCCAGCAGAGTACGCAAC
CTGCCCTGGCTGCACCGAGGCAAGGGAGACGCATCTCAGGTACCACTACA
GCATTGACCGCTGTGTCCGCAGCATTAAAGCGTGCTGCAGGGAGCAAAGG
GTGCTGCTTATAGATATCCATGGCCAAGCGTCCCATCCTTCAAGCGTGTT
AATAGGGACGCGTGATGGCTCCACGGCTGATGTGCCGTACCTGCATCGGG
AAGGGGAGGGCTTTCTTTGGCACTTGCGGCAACTCTACGGAGGTGTCATT
AAGCCAGGCGTAGGAGAGGAGGAAGTCTCAGGTTACAAAGGTGGTCACAC
TGTTCATCGGCATGCAGGTCGTGGCATCGATGCCGTGCAGCTAGAGTTTG
GCTCCTCACTGAGGGCATCACAAGCTAGGGCAGAAGTTGGGGAGAAGGTG
GCCAAGGCTATATATCACCACTTGCAACCGTTAGCGCCTTTCATTGCGTC
GCTGGGGGTAAGGTGCACAAGCACACTCAATTCGCTCTCAGTATTCCCCA
ACCAAAGTAAAATCCCCCGCCCACCAAATGAAATTTCCTCAGCTATCACC
CCCATGGGACGAGGAGAGCAAGGCCCGCGTTGTTGGAGCGCTGCAGAAGC
TGGGCATCACAACTCCCAGCGATTTATTAGAGTTCCTCCCAGCCAAGCGC
CAGCTGCTCAAGGACAAGCTAGCTCTCTGCTCTGA
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