prot_C-australica_Contig_101.6.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_101.6.1
Unique Nameprot_C-australica_Contig_101.6.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length139
Homology
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: A0A836CJD0_9STRA (Intraflagellar transport protein 20 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD0_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.800e-45
Identity = 79/130 (60.77%), Postives = 103/130 (79.23%), Query Frame = 0
Query:    3 DERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSETLA 132
            +E+V +SF +E  ++VLD DV KHS+E+EE C AF  K   F+++VHGIV VL AHA +IE+ KLRAIG RNKVDGE ++RA Q+ ALQ LI EKM+ELDR N+QY +L +VE EQQALI++LSNSE++A
Sbjct:    7 EEKVQVSFDEECRVRVLDPDVFKHSEELEENCKAFATKMQAFNAAVHGIVAVLDAHASRIEKQKLRAIGMRNKVDGEAEHRARQRMALQVLIKEKMSELDRNNVQYQSLLRVEAEQQALIERLSNSESVA 136          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: D7FRA8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRA8_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 1.120e-40
Identity = 77/133 (57.89%), Postives = 99/133 (74.44%), Query Frame = 0
Query:    3 DERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSETLAETE 135
            D  V ISF +E  I+VLD +  KHS+ +EEEC  FV K  EF++SVH IVEVL  +A +I++ KLRAIG RNKV+GE++YR  QK +LQ ++ EKM ELDR NLQY +L ++E EQ ALI++LSNSETL E E
Sbjct:    4 DNGVQISFDEECRIRVLDPEQFKHSEMLEEECRGFVDKIREFNASVHTIVEVLHENAARIDKEKLRAIGQRNKVEGELEYRLRQKASLQTMLKEKMLELDRQNLQYQSLLRIESEQLALIERLSNSETLTEQE 136          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: A0A7S2W6I1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6I1_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.730e-39
Identity = 73/129 (56.59%), Postives = 96/129 (74.42%), Query Frame = 0
Query:    1 MSDERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSE 129
            M + RV I F +E  ++VLD +  KH++E+ E+C  FV+K  +FS +VH +V+VLGA ADKIER KLRAIG RN V+ EV+ R S+K+ALQ+ I EKMAEL+R N QYN+L  +E EQ ALI+KLSN E
Sbjct:    1 MEENRVPICFDEESRVRVLDPEKFKHTEELAEQCTGFVSKIQDFSGTVHVLVDVLGAQADKIEREKLRAIGQRNMVESEVENRESKKRALQSQINEKMAELERFNKQYNSLVNLEAEQLALIEKLSNHE 129          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: A0A6V2PVC6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2PVC6_HETAK)

HSP 1 Score: 129 bits (323), Expect = 8.460e-36
Identity = 70/129 (54.26%), Postives = 93/129 (72.09%), Query Frame = 0
Query:    3 DERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSETL 131
            DE+V ISF DE  I+VLD +  KH++E+E EC  FV K  +F S+VH +VEVL   A +IE AKL+AIG RN+V+GE + R  Q+ AL  +IAEK AELDR  LQY +L  VE EQ ALI+KL+N++++
Sbjct:    2 DEKVEISFDDEYKIRVLDAEKFKHTEELERECTDFVKKIQDFHSNVHSLVEVLDKQAKRIEHAKLKAIGQRNQVEGERENRERQRIALNTMIAEKKAELDRYTLQYQSLKGVEAEQLALIEKLTNNDSI 130          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: A0A7S2BU93_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BU93_9STRA)

HSP 1 Score: 125 bits (313), Expect = 5.320e-34
Identity = 70/128 (54.69%), Postives = 93/128 (72.66%), Query Frame = 0
Query:    3 DERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSET 130
            +++V+I F DE  I+VL  +  KH++E+ E+C AFV K  +FS +VH +VEVL A A KIE  KL+AIG RN V+ E + RA ++ ALQ+ I EKMAELDR   QY +LA+VE EQ ALI+KLSN+ET
Sbjct:   25 EKKVNICFDDESRIRVLSPEKFKHTEELAEQCTAFVNKIEDFSGTVHVLVEVLDAQAKKIELEKLKAIGQRNMVESETENRARRQLALQSQINEKMAELDRYAKQYQSLARVEAEQLALIEKLSNNET 152          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: A0A7S2V367_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V367_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.640e-33
Identity = 65/129 (50.39%), Postives = 95/129 (73.64%), Query Frame = 0
Query:    1 MSDERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSE 129
            M  ++V ISF D+  I+VLD++  KH++E+E+EC  FV K   F+++VH +VEVL A A +IE AKL+AIG RN+V+GE ++R  Q+ AL  LIAEK AELDR  LQ+ +L  VE EQ A++++L+N++
Sbjct:    1 MDPDKVSISFDDDYRIRVLDSEKYKHTEELEKECKEFVQKIQTFNTTVHTLVEVLDAQAKRIENAKLKAIGQRNQVEGEREHRERQRIALNTLIAEKKAELDRYTLQHQSLVIVEAEQAAMVERLTNND 129          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: A0A7S2GG26_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GG26_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.730e-31
Identity = 61/128 (47.66%), Postives = 90/128 (70.31%), Query Frame = 0
Query:    2 SDERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSE 129
            +D++V+I F DE  I+VL  +   H++E+ E+C AFV K  +FS +VH +VE+L + A  IE  KLR IG RN+V+ E+D+R+ Q+ ALQA IAEK AEL+RC+  Y++L ++E EQ  L+   SNS+
Sbjct:    7 NDDKVNICFDDECKIRVLSPEKFDHTKELAEQCTAFVNKIADFSDTVHVLVEILDSQAKMIETEKLRTIGQRNRVESEMDHRSRQQLALQAQIAEKKAELERCSKHYDSLVRIEAEQNKLLKNFSNSD 134          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: A0A7S1CRI3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CRI3_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.350e-29
Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 0
Query:    3 DERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSE 129
            D  V I+F D+  ++VL+ D    ++ +EE C+ FV K   F+++VH +VEVL   A  IE+ KLRAIGARN  + E + R  +KK ++ALIAEK A LDR   QY +L +VEGEQ+ALI+KLSN+E
Sbjct:    2 DSNVTITFDDKYRVRVLEADKFDQTRALEEACSTFVQKIEAFNATVHSLVEVLSTSAAAIEKEKLRAIGARNLSEAEPETRERRKKQIRALIAEKRAALDRLQRQYESLEKVEGEQRALIEKLSNNE 128          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: F0Y6Q5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6Q5_AURAN)

HSP 1 Score: 109 bits (273), Expect = 2.860e-28
Identity = 62/125 (49.60%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    8 ISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTL---EFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSE 129
            ++F D+  I+VLD +   H++E+ E   +FVA      EFS  + GIVEVL ++A +IE+AKL+AIG RN+V  E + R   ++ALQA+IAEK AEL+R   Q+ +L+QVE EQ+AL+DKL NSE
Sbjct:    1 VTFDDKYRIRVLDVEKYAHTEELSEASGSFVASAAPAPEFSQLITGIVEVLDSNAQRIEKAKLKAIGMRNRVLSERENRDQHRRALQAMIAEKTAELERYQTQHQSLSQVEAEQRALVDKLGNSE 125          
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Match: F0WTS2_9STRA (Intraflagellar Transport Protein 20 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WTS2_9STRA)

HSP 1 Score: 108 bits (270), Expect = 9.940e-28
Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 0
Query:    7 HISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHGIVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAELDRCNLQYNALAQVEGEQQALIDKLSNSET 130
            HISF DE  +  L+ D + H+QE+E E   FV K  EF   + G+++VL A   +IER KL+AIG RNKV+ E++ R  QK  +  LI EK   L+R NLQY +L +V  EQQAL++KLSN+ET
Sbjct:   10 HISFDDEYRLHALEKDQISHTQELEVESNQFVTKVDEFHEIIKGVLQVLEAQEQRIEREKLKAIGERNKVESELENRNRQKGIMLVLIKEKETXLERYNLQYESLFKVLEEQQALMEKLSNNET 133          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJD0_9STRA1.800e-4560.77Intraflagellar transport protein 20 n=1 Tax=Tribon... [more]
D7FRA8_ECTSI1.120e-4057.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2W6I1_9STRA2.730e-3956.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2PVC6_HETAK8.460e-3654.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2BU93_9STRA5.320e-3454.69Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2V367_9STRA1.640e-3350.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GG26_9STRA1.730e-3147.66Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1CRI3_9STRA1.350e-2949.61Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
F0Y6Q5_AURAN2.860e-2849.60Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
F0WTS2_9STRA9.940e-2849.19Intraflagellar Transport Protein 20 putative n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 87..107
IPR028172Intraflagellar transport protein 20PFAMPF14931IFT20coord: 8..125
e-value: 2.7E-33
score: 114.7
IPR028172Intraflagellar transport protein 20PANTHERPTHR31978INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOGcoord: 6..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_101contigC-australica_Contig_101:10844..11495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_101.6.1mRNA_C-australica_Contig_101.6.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_101 10327..11499 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_101.6.1 ID=prot_C-australica_Contig_101.6.1|Name=mRNA_C-australica_Contig_101.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=139bp
MSDERVHISFSDEGHIQVLDTDVLKHSQEIEEECAAFVAKTLEFSSSVHG
IVEVLGAHADKIERAKLRAIGARNKVDGEVDYRASQKKALQALIAEKMAE
LDRCNLQYNALAQVEGEQQALIDKLSNSETLAETELRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028172FT20