mRNA_C-australica_Contig_10056.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10056.1.1
Unique NamemRNA_C-australica_Contig_10056.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: A0A2E9HXJ0_9RHOB (Succinate-semialdehyde dehydrogenase (NADP(+)) n=11 Tax=Rhodobacterales TaxID=204455 RepID=A0A2E9HXJ0_9RHOB)

HSP 1 Score: 551 bits (1420), Expect = 6.400e-195
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL
Sbjct:   83 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 362          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: UPI0010A60326 (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A60326)

HSP 1 Score: 506 bits (1302), Expect = 6.160e-177
Identity = 250/280 (89.29%), Postives = 265/280 (94.64%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            LRKWF+LMME+QDDL TIMTAEQGKPL EAKGEIAYGA+F+EFFGEEAKR+YGETIPGHQRDKRITV+KQPIGVAASITPWNFP AMITRKAAPALAAGCAFV RPAAETPLSATALAVLA+RAGIPAGVFNVV SSRSSD+GKEFCENPKVRKLTFTGSTEVGRILLKQAAD VMKCSMELGGNAPFIVFDDADLDAAVEGAI CKFRNNGQTCVCANRIYVQ G+YDAFAEKLAA VG++KVGDGLE GTDLGPLIN  A+DKV+EH+AD TA GG +
Sbjct:   83 LRKWFDLMMENQDDLGTIMTAEQGKPLTEAKGEIAYGASFVEFFGEEAKRIYGETIPGHQRDKRITVLKQPIGVAASITPWNFPNAMITRKAAPALAAGCAFVARPAAETPLSATALAVLAERAGIPAGVFNVVCSSRSSDIGKEFCENPKVRKLTFTGSTEVGRILLKQAADNVMKCSMELGGNAPFIVFDDADLDAAVEGAILCKFRNNGQTCVCANRIYVQAGVYDAFAEKLAARVGQMKVGDGLETGTDLGPLINSDAIDKVQEHVADATAKGGKV 362          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: A0A7W6DN81_9RHOB (Succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase n=1 Tax=Sagittula marina TaxID=943940 RepID=A0A7W6DN81_9RHOB)

HSP 1 Score: 498 bits (1283), Expect = 4.590e-174
Identity = 247/280 (88.21%), Postives = 265/280 (94.64%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            +RKWF+LMME+Q+DLA IMTAEQGKPLAE++GEIAYGA FIEFFGEEAKRVYGETIPGHQRDKRI V+KQPIGVAASITPWNFPTAMITRKA PALAAGCAFVGRPAAETPLSATALAVLA+RAGIPAGVFN+VTSS SS+VGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDAD+DAAVEGAI CKFRNNGQTCVCANR+YVQ G+YDAFAEKL  AV K+KVGDGLE GTDLGPLIN+ A+DKV+EHIAD  A GGT+
Sbjct:   83 MRKWFDLMMENQEDLAIIMTAEQGKPLAESRGEIAYGAGFIEFFGEEAKRVYGETIPGHQRDKRIMVMKQPIGVAASITPWNFPTAMITRKAGPALAAGCAFVGRPAAETPLSATALAVLAERAGIPAGVFNIVTSSSSSEVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADIDAAVEGAIQCKFRNNGQTCVCANRLYVQSGVYDAFAEKLREAVSKMKVGDGLEDGTDLGPLINKGALDKVQEHIADAKAKGGTV 362          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: X6KZP0_9RHOB (GabD protein n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6KZP0_9RHOB)

HSP 1 Score: 494 bits (1272), Expect = 2.150e-172
Identity = 247/280 (88.21%), Postives = 260/280 (92.86%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            LRKWF+LMME+QDDL TIMTAEQGKPL+E+KGE+AYGA+F+EFF EEAKRVYGETIPGH RDKRITVIKQPIGVAASITPWNFP AMITRKAAPALAAGCAFV RPA ETPLSA AL VLA+RAGIPAGVFNVV SS SS+VGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAI CKFRNNGQTCVCANRIYVQDG+YDAFAEKL AAV KLKVGDGLE GTDLGPLINQ A+DKV+EHIAD  A G  +
Sbjct:   83 LRKWFDLMMENQDDLGTIMTAEQGKPLSESKGEVAYGASFVEFFAEEAKRVYGETIPGHARDKRITVIKQPIGVAASITPWNFPNAMITRKAAPALAAGCAFVARPAKETPLSAIALGVLAERAGIPAGVFNVVPSSSSSEVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIVCKFRNNGQTCVCANRIYVQDGVYDAFAEKLVAAVKKLKVGDGLEEGTDLGPLINQDAIDKVQEHIADAKAKGAKV 362          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: A0A2R8AU80_9RHOB (Glutarate-semialdehyde dehydrogenase DavD n=1 Tax=Pseudoprimorskyibacter insulae TaxID=1695997 RepID=A0A2R8AU80_9RHOB)

HSP 1 Score: 493 bits (1269), Expect = 6.360e-172
Identity = 245/280 (87.50%), Postives = 261/280 (93.21%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            LRKWF+LMME+QDDL TI+TAEQGKPLAEAKGEIAYGA+F+EFFGEEAKR+YGE IPGHQRDKRI V+KQPIGVAAS+TPWNFP AMITRKAAPALAAGCAFV RPAAETPLSA  L VLA+RAGIPAGVFNVV SSRSSD+GKEFCENPKVRKLTFTGSTEVGRILL+QAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAI CKFRNNGQTCVCANRIYVQ G+YDAFAEKLAAAV K+KVGDGLEAGTDLGPLIN  A+ KV+EHIAD TA G  +
Sbjct:   83 LRKWFDLMMENQDDLGTILTAEQGKPLAEAKGEIAYGASFVEFFGEEAKRIYGELIPGHQRDKRIQVMKQPIGVAASVTPWNFPNAMITRKAAPALAAGCAFVARPAAETPLSAIVLGVLAERAGIPAGVFNVVPSSRSSDIGKEFCENPKVRKLTFTGSTEVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAILCKFRNNGQTCVCANRIYVQAGVYDAFAEKLAAAVKKMKVGDGLEAGTDLGPLINTDAITKVQEHIADATAKGAKV 362          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: A0A3B0RWP8_9ZZZZ (Succinate-semialdehyde dehydrogenase [NAD(P)+] n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0RWP8_9ZZZZ)

HSP 1 Score: 493 bits (1268), Expect = 8.720e-172
Identity = 242/280 (86.43%), Postives = 264/280 (94.29%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            +RKWF+LM+E+ DDLATI+TAEQGKPLAEAKGEI YGAAFIEFFGEEAKR+YGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSAT L VLA+RAGIPAGVFN+VTSSRSS++GKEFCENP VRKLTFTGSTEVGRIL++QAADQVMKCSMELGGNAPFIVFDDAD+DAA+EGAI CKFRNNGQTCVCANRIYVQ G+YDAFAEKL AAV KLK+GDGLE GT LGPLIN+ A+ KV+EH+AD  + GGT+
Sbjct:   82 MRKWFDLMVENADDLATILTAEQGKPLAEAKGEILYGAAFIEFFGEEAKRIYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATVLGVLAERAGIPAGVFNIVTSSRSSEIGKEFCENPIVRKLTFTGSTEVGRILMRQAADQVMKCSMELGGNAPFIVFDDADIDAAIEGAILCKFRNNGQTCVCANRIYVQAGVYDAFAEKLKAAVSKLKMGDGLEQGTTLGPLINEDAILKVQEHVADAVSKGGTV 361          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: A0A3A8B5Z6_9RHOB (NAD-dependent succinate-semialdehyde dehydrogenase n=2 Tax=Roseovarius TaxID=74030 RepID=A0A3A8B5Z6_9RHOB)

HSP 1 Score: 491 bits (1265), Expect = 2.410e-171
Identity = 241/280 (86.07%), Postives = 263/280 (93.93%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            LRKWF+LMME+QDDLATI+TAEQGKPLAEAKGEIAYGA+F+EFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFP AMITRKAAPALAAGC+FVGRPA ETPLSAT L VLA+RAGIPAGVFN+VTS+RSS++GKEFCENPKVRKLTFTGSTEVGRILL+QAADQV+KCSMELGGNAPFIVFDDADLDAAVEGAI CKFRNNGQTCVCANRIYVQ G+YD+FAEKL AAV K+K+GDGL+ GT LGPLIN  A+DKV+EH+AD T  G  +
Sbjct:   81 LRKWFDLMMENQDDLATILTAEQGKPLAEAKGEIAYGASFVEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPNAMITRKAAPALAAGCSFVGRPAKETPLSATVLGVLAERAGIPAGVFNIVTSARSSEIGKEFCENPKVRKLTFTGSTEVGRILLRQAADQVLKCSMELGGNAPFIVFDDADLDAAVEGAIMCKFRNNGQTCVCANRIYVQAGVYDSFAEKLKAAVEKMKIGDGLKEGTQLGPLINADAIDKVQEHMADATGKGAEV 360          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: UPI001AE0E551 (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Sagittula salina TaxID=2820268 RepID=UPI001AE0E551)

HSP 1 Score: 491 bits (1265), Expect = 2.580e-171
Identity = 245/280 (87.50%), Postives = 261/280 (93.21%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            LRKWF+LMME+Q+DLA IMTAEQGKPLAE++GEIAYGA FIEFFGEEAKR+YGETIPGHQRDKRI V+KQPIGVAASITPWNFP AMI RKAAPALAAGCAFVGRPAAETPLSATA+AVLA RAGIPAGV N+VTSS+SSDVGKEFCEN KVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDAD+DAAV+GAI CKFRNNGQTCVCANRIYVQ GIYDAFA KL AAV K+KVGDGLE GTDLGPLIN  A+DKV+EHIAD TA G T+
Sbjct:   83 LRKWFDLMMENQEDLAIIMTAEQGKPLAESRGEIAYGAGFIEFFGEEAKRIYGETIPGHQRDKRIMVMKQPIGVAASITPWNFPNAMIARKAAPALAAGCAFVGRPAAETPLSATAMAVLAHRAGIPAGVLNIVTSSKSSDVGKEFCENAKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADIDAAVQGAILCKFRNNGQTCVCANRIYVQSGIYDAFAAKLKAAVEKMKVGDGLEEGTDLGPLINSDAIDKVQEHIADATAKGATV 362          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: A0A2T7G5F1_9RHOB (Succinate-semialdehyde dehydrogenase (NADP(+)) n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A2T7G5F1_9RHOB)

HSP 1 Score: 491 bits (1264), Expect = 3.410e-171
Identity = 244/280 (87.14%), Postives = 259/280 (92.50%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            LRKWF+LMMEHQDDL TI+TAEQGKPLAEAKGE+AYGA+FIEFF EEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFP AMITRKAAPALAAGCAFVGRPAAETPLSATA+ VLA+RAGIPAGVFN+VTSSRSS+VGKEFCENP VRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAI CKFRNNGQTCVCANRIYVQ G+YD FAEKL AA  KLK+GDGLE G  LGPLIN  A+ KV+EH+AD  + GG +
Sbjct:   81 LRKWFDLMMEHQDDLGTILTAEQGKPLAEAKGEVAYGASFIEFFAEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPNAMITRKAAPALAAGCAFVGRPAAETPLSATAMGVLAERAGIPAGVFNIVTSSRSSEVGKEFCENPAVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIMCKFRNNGQTCVCANRIYVQAGVYDKFAEKLKAATEKLKMGDGLEEGVTLGPLINADAITKVQEHVADAKSKGGKV 360          
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Match: UPI000EAD882D (NAD-dependent succinate-semialdehyde dehydrogenase n=2 Tax=Chachezhania TaxID=2603319 RepID=UPI000EAD882D)

HSP 1 Score: 490 bits (1262), Expect = 7.360e-171
Identity = 241/280 (86.07%), Postives = 263/280 (93.93%), Query Frame = 1
Query:    1 LRKWFELMMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIPGHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPAAETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTFTGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACKFRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPLINQSAVDKVKEHIADVTAHGGTL 840
            LR+WF+LM+E++DDL  I+TAEQGKP+AEA GEIAYGA+F+EFFGEEAKR+YGETIPGHQRDKRITV+KQPIGVAASITPWNFP AMITRKAAPALAAGC+FV RPAAETPLSA  L VLA+RAGIPAGVFNVV SS SS++GKEFCENPKVRKLTFTGSTEVGRILL+QAADQV+KCSMELGGNAPFIVFDDADLDAAVEGAI CKFRNNGQTCVCANRIYVQDG+YDAFAEKLA AVGKLKVGDGLE G   GPLIN +AVDKV+EH+ADVTAHGGT+
Sbjct:   84 LRRWFDLMIENKDDLGLILTAEQGKPVAEAVGEIAYGASFVEFFGEEAKRIYGETIPGHQRDKRITVLKQPIGVAASITPWNFPNAMITRKAAPALAAGCSFVARPAAETPLSAIVLGVLAERAGIPAGVFNVVPSSGSSEIGKEFCENPKVRKLTFTGSTEVGRILLRQAADQVLKCSMELGGNAPFIVFDDADLDAAVEGAIICKFRNNGQTCVCANRIYVQDGVYDAFAEKLAEAVGKLKVGDGLEDGVTTGPLINDAAVDKVEEHLADVTAHGGTV 363          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10056.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9HXJ0_9RHOB6.400e-195100.00Succinate-semialdehyde dehydrogenase (NADP(+)) n=1... [more]
UPI0010A603266.160e-17789.29NAD-dependent succinate-semialdehyde dehydrogenase... [more]
A0A7W6DN81_9RHOB4.590e-17488.21Succinate-semialdehyde dehydrogenase/glutarate-sem... [more]
X6KZP0_9RHOB2.150e-17288.21GabD protein n=1 Tax=Rhodobacteraceae bacterium PD... [more]
A0A2R8AU80_9RHOB6.360e-17287.50Glutarate-semialdehyde dehydrogenase DavD n=1 Tax=... [more]
A0A3B0RWP8_9ZZZZ8.720e-17286.43Succinate-semialdehyde dehydrogenase [NAD(P)+] n=1... [more]
A0A3A8B5Z6_9RHOB2.410e-17186.07NAD-dependent succinate-semialdehyde dehydrogenase... [more]
UPI001AE0E5512.580e-17187.50NAD-dependent succinate-semialdehyde dehydrogenase... [more]
A0A2T7G5F1_9RHOB3.410e-17187.14Succinate-semialdehyde dehydrogenase (NADP(+)) n=4... [more]
UPI000EAD882D7.360e-17186.07NAD-dependent succinate-semialdehyde dehydrogenase... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10056contigC-australica_Contig_10056:1..840 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1305735.JAFT01000005_gene2090
Preferred namegabD
PFAMsAldedh
Model size840
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00080
KEGG koko:K00135
KEGG ReactionR00713,R00714,R02401
KEGG Pathwayko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120
KEGG ModuleM00027
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.06e-167
EggNOG OGsCOG1012@1|root,COG1012@2|Bacteria,1MU1V@1224|Proteobacteria,2TQR1@28211|Alphaproteobacteria,2PCST@252301|Oceanicola
EC1.2.1.16,1.2.1.20,1.2.1.79
DescriptionCOG1012 NAD-dependent aldehyde dehydrogenases
Cds size819
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586739.6626801-UTR-C-australica_Contig_10056:0..211682586739.6626801-UTR-C-australica_Contig_10056:0..21Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10056 1..21 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586739.6751056-CDS-C-australica_Contig_10056:21..8401682586739.6751056-CDS-C-australica_Contig_10056:21..840Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10056 22..840 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10056.1.1prot_C-australica_Contig_10056.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10056 22..840 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10056.1.1

>prot_C-australica_Contig_10056.1.1 ID=prot_C-australica_Contig_10056.1.1|Name=mRNA_C-australica_Contig_10056.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=273bp
MMEHQDDLATIMTAEQGKPLAEAKGEIAYGAAFIEFFGEEAKRVYGETIP
GHQRDKRITVIKQPIGVAASITPWNFPTAMITRKAAPALAAGCAFVGRPA
AETPLSATALAVLADRAGIPAGVFNVVTSSRSSDVGKEFCENPKVRKLTF
TGSTEVGRILLKQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAIACK
FRNNGQTCVCANRIYVQDGIYDAFAEKLAAAVGKLKVGDGLEAGTDLGPL
INQSAVDKVKEHIADVTAHGGTL
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mRNA from alignment at C-australica_Contig_10056:1..840+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10056.1.1 ID=mRNA_C-australica_Contig_10056.1.1|Name=mRNA_C-australica_Contig_10056.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=840bp|location=Sequence derived from alignment at C-australica_Contig_10056:1..840+ (Chrysoparadoxa australica CS_1217)
CTGCGCAAATGGTTTGAACTGATGATGGAACATCAGGACGACCTTGCCAC CATCATGACCGCCGAACAGGGCAAACCGCTGGCCGAAGCCAAGGGTGAGA TCGCCTATGGCGCCGCCTTTATCGAGTTCTTCGGCGAAGAGGCCAAGCGC GTCTACGGTGAAACGATCCCCGGCCACCAGCGCGACAAACGCATCACCGT GATCAAACAGCCCATCGGTGTGGCCGCGTCGATCACGCCTTGGAACTTCC CGACCGCGATGATCACCCGCAAGGCCGCCCCGGCGCTGGCCGCTGGCTGC GCCTTTGTCGGGCGTCCCGCGGCCGAAACGCCGCTGTCGGCGACGGCCCT CGCCGTGCTTGCAGACCGTGCAGGCATCCCGGCGGGCGTGTTCAACGTCG TCACATCCTCGCGGTCCTCGGACGTGGGCAAAGAGTTCTGCGAAAACCCC AAGGTCCGCAAGCTGACCTTCACCGGCTCCACCGAGGTGGGGCGCATCCT GCTGAAACAGGCTGCTGATCAGGTGATGAAATGCTCGATGGAGCTGGGCG GCAACGCGCCATTCATCGTGTTTGACGACGCCGATCTGGATGCCGCGGTC GAAGGCGCGATTGCCTGCAAGTTTCGCAACAACGGCCAGACCTGCGTCTG CGCCAACCGGATCTACGTGCAGGACGGCATCTATGACGCCTTCGCCGAGA AACTCGCCGCCGCCGTGGGCAAGCTCAAGGTCGGTGACGGGCTGGAGGCT GGGACCGATCTGGGGCCACTCATCAACCAAAGCGCCGTCGACAAGGTCAA GGAACACATCGCCGATGTGACCGCACATGGCGGCACGCTG
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Coding sequence (CDS) from alignment at C-australica_Contig_10056:1..840+

>mRNA_C-australica_Contig_10056.1.1 ID=mRNA_C-australica_Contig_10056.1.1|Name=mRNA_C-australica_Contig_10056.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=819bp|location=Sequence derived from alignment at C-australica_Contig_10056:1..840+ (Chrysoparadoxa australica CS_1217)
ATGATGGAACATCAGGACGACCTTGCCACCATCATGACCGCCGAACAGGG
CAAACCGCTGGCCGAAGCCAAGGGTGAGATCGCCTATGGCGCCGCCTTTA
TCGAGTTCTTCGGCGAAGAGGCCAAGCGCGTCTACGGTGAAACGATCCCC
GGCCACCAGCGCGACAAACGCATCACCGTGATCAAACAGCCCATCGGTGT
GGCCGCGTCGATCACGCCTTGGAACTTCCCGACCGCGATGATCACCCGCA
AGGCCGCCCCGGCGCTGGCCGCTGGCTGCGCCTTTGTCGGGCGTCCCGCG
GCCGAAACGCCGCTGTCGGCGACGGCCCTCGCCGTGCTTGCAGACCGTGC
AGGCATCCCGGCGGGCGTGTTCAACGTCGTCACATCCTCGCGGTCCTCGG
ACGTGGGCAAAGAGTTCTGCGAAAACCCCAAGGTCCGCAAGCTGACCTTC
ACCGGCTCCACCGAGGTGGGGCGCATCCTGCTGAAACAGGCTGCTGATCA
GGTGATGAAATGCTCGATGGAGCTGGGCGGCAACGCGCCATTCATCGTGT
TTGACGACGCCGATCTGGATGCCGCGGTCGAAGGCGCGATTGCCTGCAAG
TTTCGCAACAACGGCCAGACCTGCGTCTGCGCCAACCGGATCTACGTGCA
GGACGGCATCTATGACGCCTTCGCCGAGAAACTCGCCGCCGCCGTGGGCA
AGCTCAAGGTCGGTGACGGGCTGGAGGCTGGGACCGATCTGGGGCCACTC
ATCAACCAAAGCGCCGTCGACAAGGTCAAGGAACACATCGCCGATGTGAC
CGCACATGGCGGCACGCTG
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