prot_C-australica_Contig_1003.6.3 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1003.6.3
Unique Nameprot_C-australica_Contig_1003.6.3
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length344
Homology
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: A0A7S3XTG9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTG9_HETAK)

HSP 1 Score: 150 bits (379), Expect = 1.850e-40
Identity = 81/186 (43.55%), Postives = 117/186 (62.90%), Query Frame = 0
Query:  152 SEYRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMR 337
            +EY++KTV EI  DW  +L +D A F  +A +VAAWD  LR++Q+A+   +D+V R+LL   EL+  +  V   Q E++  L  LE QVD  F++  +R PDDAD+ERE+ YQLA+  DQ+L  +L  LR +   +N  F  Q D ++ V KI+++LNAHH SL+WLE  A  L  E+    R M+
Sbjct:    7 AEYQAKTVDEILGDWGVRLEQDVAAFARQAARVAAWDQALREHQEALGSASDRVHRLLLGQAELDRTLDTVQAYQGELEATLGALEAQVDEQFRRCAARAPDDADLERERAYQLAVATDQRLGGVLDGLRALADDINAGFDRQVDDANPVSKILRILNAHHQSLAWLERQASGLDRELAQVGRRMQ 192          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: A0A484E958_BRELC (Nsp1_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E958_BRELC)

HSP 1 Score: 155 bits (392), Expect = 5.210e-40
Identity = 80/196 (40.82%), Postives = 135/196 (68.88%), Query Frame = 0
Query:  141 SAEVTSLNTLISEYRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREM 336
            +A +T+++   +EY  +TV +I N W++QL  +A TFTTEA+KV+ WD+ + D+Q+ + +LA  V+R+ +   EL++ +  +   Q E+   L+ LE  VD +++ +Q ++P  AD+EREQT QL++DLD QL +M  TL++ V+ LN++ +  +D S+ +V+I+KVLN HHHSL W+E SA ++  E+G  SR++
Sbjct:  235 TAPMTAVDMPPAEYMGRTVEDIINSWSEQLERNADTFTTEAVKVSQWDSDVLDSQRKLGDLAGDVRRIQVAQNELDSNLDTIFAYQMELKSTLEQLEKSVDKMYE-SQDQMPVAADIEREQTLQLSVDLDDQLNSMTTTLKETVETLNQAHNDVADESNPMVQIMKVLNVHHHSLQWIEGSADRITSEIGQLSRKL 429          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: A0A225WLQ3_9STRA (Nuclear pore glycoprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLQ3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.390e-37
Identity = 76/197 (38.58%), Postives = 133/197 (67.51%), Query Frame = 0
Query:  141 SAEVTSLNTLISEYRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMR 337
            +A VT  +   +EY  +T+ +I N W++QL  +A TFTTEA+KV+ WD+ L D+Q+ + ++A  V+R+ +   EL++ +  +   Q E+   L+ LE  VD +++ +Q ++P  AD+EREQT QL++D+D QL +M  TL++ V+ LN++    +D ++ +V+I+KVLN HH+SL W+E SA ++  ++G  SR+++
Sbjct:  251 TAPVTETDKPPAEYMGRTIEDIINTWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGDIAGDVRRIQVAQNELDSNLDTIFAYQMELKSTLEQLEKSVDKMYE-SQDQMPVAADIEREQTLQLSVDIDDQLNSMTTTLKETVEKLNKAQDDVADDNNPMVQIMKVLNVHHNSLQWIEGSASRINSDIGQLSRKLQ 446          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: A0A0P1AZU3_PLAHL (Nuclear porin n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AZU3_PLAHL)

HSP 1 Score: 148 bits (373), Expect = 3.730e-37
Identity = 75/186 (40.32%), Postives = 128/186 (68.82%), Query Frame = 0
Query:  152 SEYRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMR 337
            +EY  +T+ +I N W++QL  +  TFTTEA+KV+ WD+ L D+Q+ + +LA  V+R+ +   EL+  +  +   Q E+   L+ LE  VD +++ +Q ++P  AD+EREQT QL++D+D QL +M  TL+++V+ LN++    +D S+ +V+I+KVLN HH+SL W+E+SA ++  E+G  SR+++
Sbjct:  262 AEYMGRTIEDIINAWSEQLERNTDTFTTEAVKVSKWDSDLMDSQRKLGDLAIDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLEHSVDKMYE-SQDQMPVAADIEREQTLQLSVDIDGQLNSMTTTLKEIVERLNKAQDEVADESNPIVQIMKVLNVHHNSLQWIESSADQINNEIGQLSRKLQ 446          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: A0A7S1UKA1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKA1_9STRA)

HSP 1 Score: 144 bits (362), Expect = 7.590e-37
Identity = 81/184 (44.02%), Postives = 108/184 (58.70%), Query Frame = 0
Query:  154 YRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSD----SSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSAS 333
            Y ++T+ E+ N WN+ L EDAA F   A +V  WD QLR NQ AITE+A+ VQR+ L   +L+  V  VS  Q EM   L+ LE +VD +F +  SRVP+DAD+EREQTY+LA D+ Q+L  M GTL  V + LN  F   +            ++K LN HH+ L WLE   ++L  E    S
Sbjct:  113 YVNQTIEEVVNGWNEALEEDAAQFLMLAQRVGEWDAQLRANQAAITEVAESVQRLALAQSDLDRTVDTVSAMQREMTTELEKLEVKVDQVFSQKSSRVPEDADLEREQTYKLASDVQQRLMQMHGTLHGVTQTLNRDFERSTGVGPAGMGNASLVLKTLNNHHNLLEWLERECRRLDAETSKIS 296          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: A0A3R7IKR3_9STRA (Nsp1_C domain-containing protein n=5 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7IKR3_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.930e-36
Identity = 71/183 (38.80%), Postives = 123/183 (67.21%), Query Frame = 0
Query:  157 KTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMRAT 339
            +T+ +I N W++QL  +A TFTTEA+KV+ WD+ L D+Q+ + ++A  V+R+ +   EL+  +  +   Q E+   L+ LE  VD +++ +Q ++P  AD+EREQT QL++D+D QL  M  TL++ V  LN++    +D ++ +V+I+KVLN HH+SL W+E+SA ++  ++   SR+++ T
Sbjct:    3 RTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGDIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLEKSVDKMYE-SQDQMPVAADIEREQTLQLSVDIDDQLNQMTTTLKETVDKLNKAQDDVADDNNPMVQIMKVLNVHHNSLQWIESSADRINSDISQLSRKLQDT 184          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: A0A2P4XQD6_9STRA (Nuclear pore glycoprotein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQD6_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.370e-36
Identity = 76/197 (38.58%), Postives = 131/197 (66.50%), Query Frame = 0
Query:  141 SAEVTSLNTLISEYRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMR 337
            +A VT  +   +EY  KT+ +I N W++QL  +A TFTTEA+KV+ WD+ L D+Q+ + ++A  V+R+ +   EL+  +  +   Q E+   L+ LE  VD +++ +Q ++P  AD+EREQT QL++D+D QL +M  TL++ V+ LN++    +D ++ +V+I+KVLN HH+SL W+E SA ++  ++   SR+++
Sbjct:  287 TAPVTETDKPPAEYMGKTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGDIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLEKSVDKMYE-SQDQMPVAADIEREQTLQLSVDIDDQLNSMTTTLKETVEKLNKAQDDVADDNNPLVQIMKVLNVHHNSLQWIEGSASRINSDIVQLSRKLQ 482          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: K3WPB9_GLOUD (Nsp1_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPB9_GLOUD)

HSP 1 Score: 137 bits (344), Expect = 1.110e-35
Identity = 68/172 (39.53%), Postives = 120/172 (69.77%), Query Frame = 0
Query:  166 WNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMR 337
            W++QL ++A TFT EA+KV+ WD++L ++QK + ++A  V+R+ +  +EL+  +  +   Q E+   L+ LE  VD +++  Q  +P  AD+EREQT QL++D+D+QL +M  TL++ V+ LN++ +  +D S+ +V+I+KVLN HH+SL W+E++A K+  EV   +R+++
Sbjct:    2 WSEQLEKNADTFTNEAVKVSMWDSELMESQKKLGDIASDVRRIQVAQKELDTNLDTIFAYQMELKSTLEQLENSVDKMYEA-QDHMPIAADIEREQTLQLSVDIDEQLNSMSTTLKETVEKLNKAQNEAADESNPIVQIMKVLNVHHNSLQWVESNANKISKEVSQLTRKLQ 172          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: H3GWZ9_PHYRM (Nsp1_C domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWZ9_PHYRM)

HSP 1 Score: 144 bits (363), Expect = 1.150e-35
Identity = 76/197 (38.58%), Postives = 129/197 (65.48%), Query Frame = 0
Query:  141 SAEVTSLNTLISEYRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMR 337
            +A  T  +   +EY  KT+ +I N W++QL  +A TFTTEA+KV+ WD+ L D+Q+ +  +A  V+R+ +   EL+  +  +   Q E+   L+ LE  VD +++ +Q ++P  AD+EREQT QL++D+D QL +M  TL++ V+ LN++    +D ++ +V+I+KVLN HH+SL W+E SA ++  E+   SR+++
Sbjct:  260 AAPATETDKPPAEYMGKTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRKLGGIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLEKSVDKMYE-SQDQMPVAADIEREQTLQLSVDIDDQLNSMTTTLKETVEKLNKAQDDVADENNPMVQIMKVLNVHHNSLQWIEGSAGRINGEISQLSRKLQ 455          
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Match: A0A6A3WIJ5_9STRA (Nsp1_C domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3WIJ5_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.480e-35
Identity = 74/186 (39.78%), Postives = 126/186 (67.74%), Query Frame = 0
Query:  152 SEYRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITELADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSRVPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSSTVVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMR 337
            +EY  +T+ +I N W++QL  +A TFTTEA+KV+ WD+ L D+Q+ + ++A  V+R+ +   EL+  +  +   Q E+   L+ LE  VD +++ +Q ++P  AD+EREQT QL++D+D QL +M  +L++ V+ LN++    +D ++ +V+I+KVLN HH+SL W+E SA KL  E+   SR+++
Sbjct:  266 AEYMGRTIEDIINAWSEQLERNADTFTTEAVKVSKWDSDLMDSQRQLGDIAGDVRRIQVAQNELDTNLDTIFAYQMELKSTLEQLEKSVDKMYE-SQDQMPVAADIEREQTLQLSVDIDDQLNSMTTSLKETVEKLNKAQDDAADENNPMVQIMKVLNVHHNSLQWIEGSAGKLNGEIALLSRKLQ 450          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1003.6.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XTG9_HETAK1.850e-4043.55Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A484E958_BRELC5.210e-4040.82Nsp1_C domain-containing protein n=1 Tax=Bremia la... [more]
A0A225WLQ3_9STRA1.390e-3738.58Nuclear pore glycoprotein n=1 Tax=Phytophthora meg... [more]
A0A0P1AZU3_PLAHL3.730e-3740.32Nuclear porin n=1 Tax=Plasmopara halstedii TaxID=4... [more]
A0A7S1UKA1_9STRA7.590e-3744.02Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A3R7IKR3_9STRA1.930e-3638.80Nsp1_C domain-containing protein n=5 Tax=Peronospo... [more]
A0A2P4XQD6_9STRA3.370e-3638.58Nuclear pore glycoprotein n=2 Tax=Phytophthora pal... [more]
K3WPB9_GLOUD1.110e-3539.53Nsp1_C domain-containing protein n=1 Tax=Globispor... [more]
H3GWZ9_PHYRM1.150e-3538.58Nsp1_C domain-containing protein n=1 Tax=Phytophth... [more]
A0A6A3WIJ5_9STRA1.480e-3539.78Nsp1_C domain-containing protein n=4 Tax=Phytophth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..218
NoneNo IPR availableGENE3D1.20.5.170coord: 185..244
e-value: 1.0E-8
score: 37.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR12084:SF0NUCLEOPORIN 62-LIKEcoord: 13..333
IPR007758Nucleoporin, NSP1-like, C-terminalPFAMPF05064Nsp1_Ccoord: 150..249
e-value: 1.7E-15
score: 56.8
IPR026010Nucleoporin NSP1/NUP62PANTHERPTHR12084NUCLEAR PORE GLYCOPROTEIN P62-RELATEDcoord: 13..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1003contigC-australica_Contig_1003:7602..9157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1003.6.3mRNA_C-australica_Contig_1003.6.3Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1003 7523..9417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1003.6.3 ID=prot_C-australica_Contig_1003.6.3|Name=mRNA_C-australica_Contig_1003.6.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=344bp
MQTPSKTLSMDAGTPAPAPATTSAPAPAGGFSFGGTPAPAPAATSAPAPA
GGFSFGEIIFLMQHSLTPPSCHLLGLGTPAPAPATTSAPAPAGGFSFGGL
SSTATPSTALATAAAPAGTTTSTGAGGVAAPAALASQAAPSAEVTSLNTL
ISEYRSKTVAEITNDWNKQLREDAATFTTEALKVAAWDTQLRDNQKAITE
LADQVQRMLLVHQELENKVTAVSTSQTEMDQALQTLETQVDGLFKKNQSR
VPDDADVEREQTYQLAIDLDQQLTTMLGTLRDVVKGLNESFSAQSDSSST
VVKIIKVLNAHHHSLSWLETSAKKLQVEVGSASREMRATAGSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007758Nucleoporin_NSP1_C
IPR026010NSP1/NUP62