prot_C-australica_Contig_1001.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1001.1.1
Unique Nameprot_C-australica_Contig_1001.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length80
Homology
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BLAST of mRNA_C-australica_Contig_1001.1.1 vs. uniprot
Match: A0A835YNG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG4_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.440e-18
Identity = 40/69 (57.97%), Postives = 49/69 (71.01%), Query Frame = 0 
Query:    1 SSYYNAPVSINICQCEEVIPGTYNRVVELQISGHKFCTAHSIIALHSDACIEAVRGKSIGIGQLFRSCE 69
            SSYYNAPV ++I QC+      Y R+V L + G +FC A SI+ LHSDACIEAV  KS+GIGQLFR  +
Sbjct:  142 SSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLD 210
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1001.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YNG4_9STRA3.440e-1857.97Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1001contigC-australica_Contig_1001:136..375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1001.1.1mRNA_C-australica_Contig_1001.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1001 136..375 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1001.1.1 ID=prot_C-australica_Contig_1001.1.1|Name=mRNA_C-australica_Contig_1001.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=80bp
SSYYNAPVSINICQCEEVIPGTYNRVVELQISGHKFCTAHSIIALHSDAC
IEAVRGKSIGIGQLFRSCELAWHFSSRCS*
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