mRNA_C-australica_Contig_1000.7.6 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1000.7.6
Unique NamemRNA_C-australica_Contig_1000.7.6
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A835Z200_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z200_9STRA)

HSP 1 Score: 372 bits (955), Expect = 5.390e-124
Identity = 198/369 (53.66%), Postives = 254/369 (68.83%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLK-QLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFGVSNSGAGQNISTGERRF 1104
            NTCYCNSV+Q+LYFC PL+ +LL +     S  +  +  +  PA         SL   L   F +             +   K ++G + P  F++TLRE NELFRGNMQQDAHEF+NF+IND++DTL+ ++       D+ G                    + AAP  TW+H +F+GVLTNET+C+CCET+++RDE FVDL LDIEQN SV+ACLRNFS+ ETLTG NKF+CETCC LQEA+K+M L++LP VLTLHLKRFKY+E IQ+FSKLSHRVVFP EL++PNM ++   +AD  LY LFAVVVHIGRG NHGHYVA+VKS+GRW+LFDD+LVE+VDE+VL + FG+SN   G + +TG   F
Sbjct:   35 NTCYCNSVMQALYFCGPLRTELLARHTQNSSATVMATGSSQYPAG--------SLLYQLAELFAV-------------ITNTKRLSGRVAPQAFMQTLRETNELFRGNMQQDAHEFYNFIINDMADTLLRMSA------DKSG--------------------DQAAPKTTWIHDLFQGVLTNETKCICCETVTHRDEPFVDLPLDIEQNCSVTACLRNFSRMETLTGCNKFFCETCCALQEAEKRMCLRRLPRVLTLHLKRFKYMEQIQNFSKLSHRVVFPLELRMPNMARDSAADADGILYHLFAVVVHIGRGLNHGHYVAVVKSQGRWMLFDDDLVEVVDEAVLHKVFGLSNH-LGGSTNTGYLLF 355          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: D8LBJ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBJ3_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 1.610e-107
Identity = 204/465 (43.87%), Postives = 253/465 (54.41%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVSE---GSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAK-----------------------------------------------------KVAN-------------------------------------------------------EGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVK-EADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFGVS 1059
            NTCYCNSVLQ+LYFC PL+  L Q   E   G                 S +  +S    L  S                ++ QK  +G+L P++FLRTLRE+NELFRGN QQDAHEFFNF++N+++D++V   K                                                     K+++                                                       EG+      G  G   G     +   E     +TW+H +F+GVLTN+T+CLCCET+SNRDE F+DLSLD+EQNSSVSACLRNFS TETLT KNKF+CETC  LQEA+K+++LK+LP VLTLHLKRFKYVE +++FSKLSHRVVFP EL+ PNMT    + +AD RLY LFAVVVHIGRGPNHGHYVA+VKS GRWLLFDDE+VELV+E VL QCFG++
Sbjct:   35 NTCYCNSVLQALYFCEPLRHHLAQVREEDTSGGXXXXXXXXXXXXXXXXSGKTVLSELAELFSS----------------ISNQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEMADSVVARRKLREEAATVQEHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRSSTWSKMSSFKGSFGNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGESAAGVDGGGGNARGNRRTSDGANESGG--ETWVHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRNFSSTETLTKKNKFFCETCYALQEAEKKIRLKRLPRVLTLHLKRFKYVESLENFSKLSHRVVFPLELRTPNMTDAAGEADADGRLYRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQVLKQCFGLA 481          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A9RF40_PHYPA (Predicted protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A9RF40_PHYPA)

HSP 1 Score: 321 bits (823), Expect = 5.450e-104
Identity = 172/351 (49.00%), Postives = 224/351 (63.82%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053
            NTCYCNSVLQ+LYFC P ++ L++   +      + +                    L C   L        F+  Q+  QK  TG + P  F++ +R++NELFR  M QDAHEF NFL+N++ D LV+ A+   +      SP    G GA  G    N  EP   + TW+H +F+G LTNETRCL CETI+ RDETF+DLSLDIEQNSS+++CLRNFS TETL  ++KF+C+ CC+LQEA K+MK+K  P +L LHLKRFKY+E +  + KLS+RVVFP ELKL N T +      E  Y+LFAVVVH+G GPNHGHYV++VKS   WL FDDE VE++DES++   FG
Sbjct:   30 NTCYCNSVLQALYFCVPFREQLLEYCGQKKPVAESEENL------------------LTCLSEL--------FT--QINSQKKKTGVIAPKRFVQRVRKQNELFRSYMHQDAHEFLNFLLNELVDILVKEAQAANSNSGSHTSPEKVVGNGATNGLANGNHKEP---VVTWVHKIFQGTLTNETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDA--PGSEAEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDESIVQTFFG 347          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A176W0E8_MARPO (USP domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0E8_MARPO)

HSP 1 Score: 320 bits (821), Expect = 1.130e-103
Identity = 175/352 (49.72%), Postives = 224/352 (63.64%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTG-ANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053
            NTCYCNSVLQ+LYFC P +  L++  S       T D                    L C   L        F+  Q+  QK  TG + P  F++ ++++NELFR  M QDAHEF NFL+N++ D L + AK  +     +  P   ANG   G+     NG  P  P+ TW+H +F+G LTNETRCL CETI+ RDETF+DLSLDIEQNSS+++CLRNFS TETL  ++KF+C+ CC+LQEA K+MK+K  P +L LHLKRFKY+E +  + KLS+RVVFP ELKL N T +      E  Y+LFAVVVH+G GPNHGHYV++VKS   WL FDDE VE++DESV+   FG
Sbjct:   32 NTCYCNSVLQALYFCVPFRDQLLEHASRSKGSGETDDNL------------------LTCLSEL--------FT--QINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAKASSKPTSGQVHPDKLANGTANGI----ANGNHPH-PVVTWVHKIFQGTLTNETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDA--PGSEAEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDESVVQTFFG 348          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A484MYH1_9ASTE (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Convolvulaceae TaxID=4118 RepID=A0A484MYH1_9ASTE)

HSP 1 Score: 318 bits (816), Expect = 8.260e-103
Identity = 170/355 (47.89%), Postives = 234/355 (65.92%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVAN--EGDEKGSPTGANGAGAGVGAL--GENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053
            NTCYCNSVLQ+LYFC P ++ L++  S  +++L  +D++                        L   AD       Q++ QK  TG + P  F++ L+++NE+FR  M QDAHEF N+L+N+    LV++ +K +N  + D + SP+  N A      L  G        P+ TW+H  F+G+LTNETRCLCCET++ RDETF DLSLDIEQNSS+++CL+NFS TETL  ++KF+C+ CC+LQEA K+MK+KK P++L +HLKRFKY+E +  + KLS+RVVFP ELKL N     V+EAD   Y+LF+VVVH+G GPNHGHYV++VKS   WL FDD+ VE++DES +   FG
Sbjct:   30 NTCYCNSVLQALYFCVPFREQLLEYYS-NNKNLADADES-----------------------LLTCLADLF----MQISSQKKKTGVIAPRRFVQKLKKQNEIFRSYMHQDAHEFLNYLLNE----LVDILEKESNAAKSDRETSPSSENVANGPKAILSNGHTNGNHKEPLVTWVHKNFQGILTNETRCLCCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT----VEEADAE-YSLFSVVVHVGTGPNHGHYVSLVKSHNHWLFFDDDSVEMIDESAVQTFFG 347          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A804JXV6_MUSAM ((wild Malaysian banana) hypothetical protein n=4 Tax=commelinids TaxID=4734 RepID=A0A804JXV6_MUSAM)

HSP 1 Score: 318 bits (814), Expect = 1.160e-102
Identity = 179/374 (47.86%), Postives = 239/374 (63.90%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTG--ANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFGVSNSGAGQNISTGERRFPPSL 1116
            NTCYCNSVLQ+LYFC P ++ L+   S  +++L   ++  L                L   FT             Q++ QK  TG + P  F++ ++++NE FR  M QDAHEF NFL+N+++D L E     A +  E  SP+   ANG    +     NG  P  P+ TW+H  F+G+LTNETRCL CET++ RDETF+DLSLDIEQNSS+++CL+NFS TETL  ++KF+C+ CC+LQEA K+MK+KK P++L +HLKRFKYVE +  + KLS+RVVFP ELKL N  ++   E     Y+LFAVVVH+G GPNHGHYV++VKS   WLLFDDE VE++DES++   FG S   +G N   G   F  SL
Sbjct:   32 NTCYCNSVLQALYFCIPFREQLLYYYS-NNKNLGDVEENLLTC--------------LADLFT-------------QISSQKKKTGVIAPKRFVQRVKKQNEYFRSYMHQDAHEFLNFLLNELADIL-EKESDAAKDSIETSSPSEKLANGPNHSL----PNGV-PKEPLLTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYVEQLGRYKKLSYRVVFPMELKLNNTVEDIDSE-----YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLLFDDENVEMIDESMVQTFFGSSQEYSG-NTDNGYILFYESL 365          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: U5CXE6_AMBTC (USP domain-containing protein n=10 Tax=Magnoliopsida TaxID=3398 RepID=U5CXE6_AMBTC)

HSP 1 Score: 317 bits (812), Expect = 1.980e-102
Identity = 174/353 (49.29%), Postives = 226/353 (64.02%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTG--ANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053
            NTCYCNSVLQ+LYFC P ++ L++            D                    L C   L        FS  Q+  QK  TG + P  F++ ++++NELFR  M QDAHEF NFL+N++ D L E     A    E  SP+   ANG      +L  NG +   P+ TW+H  F+G+LTNETRCL CET++ RDETF+DLSLDIEQNSS+++CLRNFS TETL  ++KF+C+ CC+LQEA K+MK+KK P++L +HLKRFKY+E +  + KLS+RVVFP ELKL N     V++AD   Y+LFAVVVH+G GPNHGHYV++VKS   WL FDDE VE++DES +   FG
Sbjct:   30 NTCYCNSVLQALYFCVPFREQLLEYYGNNKTQGDADDNL------------------LTCLAEL--------FS--QICSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFLLNELVDIL-EKESNAAKASPETSSPSEKTANG----PRSLQPNGVQKE-PLVTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNT----VEDADSE-YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFG 343          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A2G9G885_9LAMI (Ubiquitin-specific protease n=2 Tax=Lamiales TaxID=4143 RepID=A0A2G9G885_9LAMI)

HSP 1 Score: 317 bits (811), Expect = 3.090e-102
Identity = 172/357 (48.18%), Postives = 227/357 (63.59%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVS------EGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053
            NTCYCNSVLQ+LYFC P ++ L++  S      EG ++L                        L C   L        FS  Q++ QK  TG + P  F++ +R++NE+FRG M QDAHEF N+L+N + D L + + K  NE    G   G             NG +P  P+ TW+H  F+G+LTNETRCL CET++ RDETF+DLSLDIEQNSS+++CL+NFS TETL  ++KF+C+ CC+LQEA K+MK+KK P +L +HLKRFK++E +    KLS+RVVFP ELKL N     V++AD   Y+LFAVVVH+G GPNHGHYV++VKS   WL FDDE VE++DES +   FG
Sbjct:   38 NTCYCNSVLQALYFCVPFREQLLEYYSNNKNQGEGDENL------------------------LTCLAEL--------FS--QISSQKKKTGVIAPKRFVQRVRKENEVFRGYMHQDAHEFLNYLLNKLVDILEKESHKDTNEVVSNGPSNGH-----------VNGVKPEPPV-TWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPRILVIHLKRFKFMEQLNRHKKLSYRVVFPLELKLSNT----VEDADTE-YSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAIQTFFG 343          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A0K9RIK7_SPIOL (USP domain-containing protein n=7 Tax=Pentapetalae TaxID=1437201 RepID=A0A0K9RIK7_SPIOL)

HSP 1 Score: 317 bits (811), Expect = 3.190e-102
Identity = 165/351 (47.01%), Postives = 228/351 (64.96%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053
            NTCYCNSVLQ+LYFC P ++ L++  S   + +   +                    L C   L        F+  Q++ QK  TG + P  F++ L+++NELFR  M QDAHEF NFL+N++ D L + A+   ++ +   S   ANG         +    P  P+ TW+H  F+G+LTNETRCL CET++ RDETF DLSLDIEQNSS+++CL+NFS TETL  ++KF+C+ CC+LQEA K+MK+K+ P++L +HLKRFKY+E +  + KLS+RVVFP ELKL     + V+++D R Y+LFAVVVH+G GPNHGHY+++VKS   WL FDDE VE++DES +   FG
Sbjct:   30 NTCYCNSVLQTLYFCVPFREQLLEYYSNNKKAVDAEENL------------------LTCLADL--------FT--QISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQSAKDDQETLPSEKAANGP-----TNTQVYASPKEPLVTWVHKSFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKRPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL----SDTVEDSD-REYSLFAVVVHVGSGPNHGHYISLVKSHNHWLFFDDENVEMIDESAVQTFFG 342          
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Match: A0A0K9QYR6_SPIOL (USP domain-containing protein n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QYR6_SPIOL)

HSP 1 Score: 316 bits (810), Expect = 4.370e-102
Identity = 168/351 (47.86%), Postives = 230/351 (65.53%), Query Frame = 1
Query:    1 NTCYCNSVLQSLYFCTPLKQLLMQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASSFSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLINDISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWMHTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKTETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFSKLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVAIVKSRGRWLLFDDELVELVDESVLSQCFG 1053
            NTCYCNSVLQ+LYFC P +  L++   +             PA    P+ ++     L C   L        F+  Q++ QK  TG + P  F++ +R++NELFRG M QDAHEF NFL+N++ D L + +    +  +   S   ANG   G+     NG +   P+ TW+H  F+G+LTNET+CL CET++ RDETF DLSLDIEQNSS+++CL+NFS TETL  ++KF+C+ CC+LQEA K+MK+KK P++L +HLKRFKY+E++  + KLS+RVVFP ELKL N  ++   E     Y+LFAVVVH+G GPNHGHYV++VKS   WL FDDE V+++DES +   FG
Sbjct:   30 NTCYCNSVLQALYFCVPFRDKLLEYYEKNKN----------PAD---PEENL-----LTCLADL--------FT--QISSQKKKTGVIAPKRFVQRVRKENELFRGYMHQDAHEFLNFLLNELVDILEKESSAAKDSSENSSSDKIANGPRNGL----ANGVQKE-PLVTWVHKNFQGILTNETKCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIENLGRYKKLSYRVVFPLELKLTNTMEDADSE-----YSLFAVVVHVGTGPNHGHYVSLVKSHNHWLFFDDENVDIIDESAVQTFFG 342          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1000.7.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z200_9STRA5.390e-12453.66Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Trib... [more]
D8LBJ3_ECTSI1.610e-10743.87Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Ecto... [more]
A9RF40_PHYPA5.450e-10449.00Predicted protein n=5 Tax=Physcomitrium patens Tax... [more]
A0A176W0E8_MARPO1.130e-10349.72USP domain-containing protein n=2 Tax=Marchantia p... [more]
A0A484MYH1_9ASTE8.260e-10347.89Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Conv... [more]
A0A804JXV6_MUSAM1.160e-10247.86(wild Malaysian banana) hypothetical protein n=4 T... [more]
U5CXE6_AMBTC1.980e-10249.29USP domain-containing protein n=10 Tax=Magnoliopsi... [more]
A0A2G9G885_9LAMI3.090e-10248.18Ubiquitin-specific protease n=2 Tax=Lamiales TaxID... [more]
A0A0K9RIK7_SPIOL3.190e-10247.01USP domain-containing protein n=7 Tax=Pentapetalae... [more]
A0A0K9QYR6_SPIOL4.370e-10247.86USP domain-containing protein n=4 Tax=Chenopodiace... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1000contigC-australica_Contig_1000:15008..16895 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LBJ3
Preferred nameUSP46
PFAMsUCH
Model size1227
Max annot lvl2759|Eukaryota
KEGG koko:K11842,ko:K11872
Hectar predicted targeting categoryother localisation
GOsGO:0000578,GO:0001662,GO:0002209,GO:0002682,GO:0002684,GO:0003002,GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004843,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005768,GO:0005829,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006897,GO:0006950,GO:0006952,GO:0007154,GO:0007275,GO:0007350,GO:0007351,GO:0007389,GO:0007584,GO:0007610,GO:0007631,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008343,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009605,GO:0009636,GO:0009790,GO:0009798,GO:0009880,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009948,GO:0009952,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010469,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010992,GO:0010995,GO:0012505,GO:0016043,GO:0016192,GO:0016579,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019783,GO:0019941,GO:0022411,GO:0022898,GO:0023051,GO:0023056,GO:0023057,GO:0030163,GO:0030534,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0031982,GO:0032228,GO:0032409,GO:0032412,GO:0032501,GO:0032502,GO:0032879,GO:0032984,GO:0033555,GO:0034762,GO:0034765,GO:0035254,GO:0035255,GO:0035282,GO:0035871,GO:0036211,GO:0036459,GO:0036477,GO:0040012,GO:0040017,GO:0042221,GO:0042493,GO:0042592,GO:0042596,GO:0043025,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043269,GO:0043412,GO:0043624,GO:0043632,GO:0043933,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045013,GO:0045471,GO:0045746,GO:0045892,GO:0045934,GO:0045990,GO:0046677,GO:0048149,GO:0048518,GO:0048519,GO:0048520,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050795,GO:0050804,GO:0050854,GO:0050856,GO:0050857,GO:0050862,GO:0050896,GO:0051049,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051261,GO:0051603,GO:0051716,GO:0060004,GO:0060013,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0065008,GO:0065009,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0070887,GO:0071108,GO:0071496,GO:0071704,GO:0071840,GO:0071947,GO:0080090,GO:0090325,GO:0090326,GO:0097305,GO:0097458,GO:0097708,GO:0098657,GO:0099177,GO:0099601,GO:0101005,GO:0140096,GO:1900449,GO:1901564,GO:1901565,GO:1901575,GO:1901700,GO:1902679,GO:1903506,GO:1903507,GO:1904062,GO:2000112,GO:2000113,GO:2000311,GO:2001141,GO:2001257
Exons7
Evalue4.7e-102
EggNOG OGsKOG1864@1|root,KOG1864@2759|Eukaryota
Ec32 ortholog descriptionPeptidase C19, ubiquitin carboxyl-terminal hydrolase
Ec32 orthologEc-27_003770.1
EC3.4.19.12
Descriptionubiquitinyl hydrolase activity
Cds size1125
COG categoryO
BRITEko00000,ko01000,ko01002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1000.7.6prot_C-australica_Contig_1000.7.6Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1000 15044..16829 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586735.69793-UTR-C-australica_Contig_1000:15007..150431682586735.69793-UTR-C-australica_Contig_1000:15007..15043Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1000 15008..15043 -
1682586735.8217902-UTR-C-australica_Contig_1000:16829..168951682586735.8217902-UTR-C-australica_Contig_1000:16829..16895Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1000 16830..16895 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586735.7177079-CDS-C-australica_Contig_1000:15043..152541682586735.7177079-CDS-C-australica_Contig_1000:15043..15254Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1000 15044..15254 -
1682586735.7292242-CDS-C-australica_Contig_1000:15348..155211682586735.7292242-CDS-C-australica_Contig_1000:15348..15521Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1000 15349..15521 -
1682586735.7401385-CDS-C-australica_Contig_1000:15597..156841682586735.7401385-CDS-C-australica_Contig_1000:15597..15684Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1000 15598..15684 -
1682586735.7764254-CDS-C-australica_Contig_1000:15762..159091682586735.7764254-CDS-C-australica_Contig_1000:15762..15909Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1000 15763..15909 -
1682586735.7872634-CDS-C-australica_Contig_1000:16064..163071682586735.7872634-CDS-C-australica_Contig_1000:16064..16307Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1000 16065..16307 -
1682586735.8026698-CDS-C-australica_Contig_1000:16396..165441682586735.8026698-CDS-C-australica_Contig_1000:16396..16544Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1000 16397..16544 -
1682586735.8129911-CDS-C-australica_Contig_1000:16713..168291682586735.8129911-CDS-C-australica_Contig_1000:16713..16829Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1000 16714..16829 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1000.7.6

>prot_C-australica_Contig_1000.7.6 ID=prot_C-australica_Contig_1000.7.6|Name=mRNA_C-australica_Contig_1000.7.6|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=375bp
MQQVSEGSQHLHTSDQTPLPASACSPQAHISLSIPLLCSFTLKAAADASS
FSGQQVAGQKNVTGYLTPSDFLRTLREKNELFRGNMQQDAHEFFNFLIND
ISDTLVEVAKKVANEGDEKGSPTGANGAGAGVGALGENGCEPAAPIKTWM
HTMFEGVLTNETRCLCCETISNRDETFVDLSLDIEQNSSVSACLRNFSKT
ETLTGKNKFYCETCCTLQEADKQMKLKKLPNVLTLHLKRFKYVEDIQSFS
KLSHRVVFPHELKLPNMTKECVKEADERLYALFAVVVHIGRGPNHGHYVA
IVKSRGRWLLFDDELVELVDESVLSQCFGVSNSGAGQNISTGERRFPPSL
SLTVSHISYQSPPTTTRLFIALSS*
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mRNA from alignment at C-australica_Contig_1000:15008..16895-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1000.7.6 ID=mRNA_C-australica_Contig_1000.7.6|Name=mRNA_C-australica_Contig_1000.7.6|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1888bp|location=Sequence derived from alignment at C-australica_Contig_1000:15008..16895- (Chrysoparadoxa australica CS_1217)
AACACCTGCTACTGCAATAGCGTGCTGCAATCCTTATACTTCTGCACACC ACTCAAGCAGCTCTTAATGCAGCAGGTCAGTGAAGGCAGCCAGCACCTGC ACACTTCTGACCAAACCCCTCTGCCTGCATCTGCCTGCAGCCCTCAAGCG CACATCTCATTATCCATCCCTCTGCTTTGCAGGTAGCTGTAGGGCACGCC CCTCTTCTTCCTTCGCCAGAGCTGATACCAGGGAAATGCCCGGAAACCAC CATTCTTTATCAGCTGGGTGACCTCTTCACAAAGGTGTGGCTAGCATATC ACTGGATGGGTGGGATGCCAGAACCACATTGCCTGCCTCTTGCTTCAATA GCTTTACATTAAAAGCTGCTGCCGATGCTTCTTCCTTTTCTGGGCAACAG GTTGCTGGGCAGAAGAACGTTACAGGGTACTTGACTCCAAGTGATTTCTT GCGCACCTTGAGAGAGAAGAACGAGTTATTTCGGGGGAATATGCAGCAGG TAATGGGGTGAAGCAGACTGTATTAATTTACTTTCCCATCTTACGCGGTG CTTCATGCCTTATGTGTTGTCCTCTCCTCTCTATGTAGGATGCACATGAG TTTTTCAACTTCTTGATCAATGACATTAGCGACACCTTGGTTGAGGTGGC AAAGAAAGTAGCGAATGAAGGGGATGAAAAGGGCTCCCCAACTGGTGCCA ATGGTGCTGGGGCTGGGGTTGGGGCCTTGGGTGAGAACGGGTGTGAGCCT GCTGCACCCATTAAGACATGGATGCACACCATGTTTGAGGGGGTGCTCAC AAACGAGACGCGGTGTTTGTGCTGTGAGACGGTGAGTGAGTGAGTGAGTG TGAGTGACTTGCTTCATTGCAGCTCTTTGTATTATCCAGTTGAAAAATGG TAGAAAGGCAATCGTGCTTAAGGGTTTCTGTGAGTTTATGCAGAGGTAAG CACTAAGGACTGACTGGCAGTACCCTGGACCCTTAGATCTCTAACAGGGA CGAGACATTTGTGGACCTGTCGCTGGACATTGAGCAGAACAGCTCTGTGT CTGCTTGCCTCCGTAACTTTAGCAAGACCGAGACGTTGACAGGGAAGAAC AAGTTTTACTGTGAGACTTGCTGCACGCTCCAGGTCGTGTCAATGCCTCC GTCAACTACAACTTGATGCCTGGCCGCTCGCTCAGCTAGCACCCCCGCAT CTACTCCTCAGGAAGCAGACAAGCAGATGAAGCTAAAGAAACTTCCAAAT GTACTGACGTTGCACCTGAAGCGTTTCAAGTACGTGGAGGATATCCAGGT GAGTGGATGAGAAGAAGGCATTGAGAGAACGCTCCCTTTATTAATTTGCT GACCAATCAATCCAACGCGCGCAGAGCTTCTCCAAGCTGAGCCATCGAGT GGTCTTCCCTCATGAGCTCAAGCTGCCCAACATGACCAAGGAATGCGTGA AAGAGGCAGATGAACGGCTGTACGCTCTGTTTGCGGTGGTTGTGCACATA GGGAGAGGGCCTAACCACGGTCACTACGTCGCCATTGTCAAGAGCCGGTG AGATGGATGTGTCTCGTGTGCCTTGGTTAGAGAGATCCCAGCATTGCCCT CTCTTTTAAAGATGATTAACATCTGATTGCACTTCCTCTAGGGGGCGATG GCTGCTCTTTGACGATGAGTTGGTGGAGCTTGTAGATGAAAGCGTACTTA GCCAATGTTTTGGGGTTAGCAACAGTGGTGCAGGGCAGAACATTAGTACA GGTGAGCGCCGATTCCCTCCCTCTCTCTCTCTTACAGTCAGCCACATCTC ATATCAGTCTCCACCCACAACAACCAGGTTATTTATTGCTTTATCAAGCT GAGCAGTGAAGTTAGAAGGGTTTGGGGGGACTTTCGCC
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Coding sequence (CDS) from alignment at C-australica_Contig_1000:15008..16895-

>mRNA_C-australica_Contig_1000.7.6 ID=mRNA_C-australica_Contig_1000.7.6|Name=mRNA_C-australica_Contig_1000.7.6|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1125bp|location=Sequence derived from alignment at C-australica_Contig_1000:15008..16895- (Chrysoparadoxa australica CS_1217)
ATGCAGCAGGTCAGTGAAGGCAGCCAGCACCTGCACACTTCTGACCAAAC
CCCTCTGCCTGCATCTGCCTGCAGCCCTCAAGCGCACATCTCATTATCCA
TCCCTCTGCTTTGCAGCTTTACATTAAAAGCTGCTGCCGATGCTTCTTCC
TTTTCTGGGCAACAGGTTGCTGGGCAGAAGAACGTTACAGGGTACTTGAC
TCCAAGTGATTTCTTGCGCACCTTGAGAGAGAAGAACGAGTTATTTCGGG
GGAATATGCAGCAGGATGCACATGAGTTTTTCAACTTCTTGATCAATGAC
ATTAGCGACACCTTGGTTGAGGTGGCAAAGAAAGTAGCGAATGAAGGGGA
TGAAAAGGGCTCCCCAACTGGTGCCAATGGTGCTGGGGCTGGGGTTGGGG
CCTTGGGTGAGAACGGGTGTGAGCCTGCTGCACCCATTAAGACATGGATG
CACACCATGTTTGAGGGGGTGCTCACAAACGAGACGCGGTGTTTGTGCTG
TGAGACGATCTCTAACAGGGACGAGACATTTGTGGACCTGTCGCTGGACA
TTGAGCAGAACAGCTCTGTGTCTGCTTGCCTCCGTAACTTTAGCAAGACC
GAGACGTTGACAGGGAAGAACAAGTTTTACTGTGAGACTTGCTGCACGCT
CCAGGAAGCAGACAAGCAGATGAAGCTAAAGAAACTTCCAAATGTACTGA
CGTTGCACCTGAAGCGTTTCAAGTACGTGGAGGATATCCAGAGCTTCTCC
AAGCTGAGCCATCGAGTGGTCTTCCCTCATGAGCTCAAGCTGCCCAACAT
GACCAAGGAATGCGTGAAAGAGGCAGATGAACGGCTGTACGCTCTGTTTG
CGGTGGTTGTGCACATAGGGAGAGGGCCTAACCACGGTCACTACGTCGCC
ATTGTCAAGAGCCGGGGGCGATGGCTGCTCTTTGACGATGAGTTGGTGGA
GCTTGTAGATGAAAGCGTACTTAGCCAATGTTTTGGGGTTAGCAACAGTG
GTGCAGGGCAGAACATTAGTACAGGTGAGCGCCGATTCCCTCCCTCTCTC
TCTCTTACAGTCAGCCACATCTCATATCAGTCTCCACCCACAACAACCAG
GTTATTTATTGCTTTATCAAGCTGA
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