prot_C-australica_Contig_998.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_998.1.1
Unique Name	prot_C-australica_Contig_998.1.1
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	187

Homology

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_998.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_998.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 69..98 e-value: 0.016 score: 24.4 coord: 135..164 e-value: 0.95 score: 18.5 coord: 33..65 e-value: 2.8 score: 17.0 coord: 102..131 e-value: 0.0037 score: 26.5 coord: 1..29 e-value: 680.0 score: 6.3
IPR002110	Ankyrin repeat	PFAM	PF12796	Ank_2	coord: 5..99 e-value: 2.8E-12 score: 47.1
IPR002110	Ankyrin repeat	PFAM	PF00023	Ank	coord: 103..132 e-value: 0.0056 score: 17.1
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 135..167 score: 10.33894
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 69..101 score: 11.62102
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 33..68 score: 9.72461
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 1..32 score: 11.64773
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 102..134 score: 10.12526
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 100..181 e-value: 1.1E-19 score: 72.5
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..99 e-value: 9.6E-26 score: 92.3
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 1..176
None	No IPR available	PANTHER	PTHR24193	ANKYRIN REPEAT PROTEIN	coord: 3..117 coord: 81..172
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 102..131 score: 9.33032
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 1..31 score: 10.28545
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 69..101 score: 10.258919
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 135..166 score: 9.383383

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_998	contig	C-australica_Contig_998:149..1655 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_998.1.1	mRNA_C-australica_Contig_998.1.1	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_998 149..1803 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_998.1.1 ID=prot_C-australica_Contig_998.1.1|Name=mRNA_C-australica_Contig_998.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=187bp
GRAALSLAAEAGDGDSVRFLLKGGADTERRDQDGNTALILAAGVDDTAGL
SCVTALLDAGADLEARGESKATALHRAARWGRASIVRLLADRGALIDARN
KFGDTPLILAAYHGNEAAATALLEAGASLHATCNDGRSALFYGAVRGQLP
VVQTLLLFGADPDTPDVQGTKPYPFCEAQWRIGAHM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf