prot_C-australica_Contig_9942.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_9942.1.1
Unique Name	prot_C-australica_Contig_9942.1.1
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	101

Homology

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: A0A356NJ21_9BACT (Uncharacterized protein n=7 Tax=Verrucomicrobiales TaxID=48461 RepID=A0A356NJ21_9BACT)

HSP 1 Score: 105 bits (262), Expect = 4.360e-25
Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 0

Query:    3 RYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGISKSIEK 101
            RY    L+ FA  L+ +AGM      D A +L+E DLMGHT+HGL ML PYL S+ +G+M LSG+Y VI+D    I  +G FLPGPWLVK  I K+  +
Sbjct:    4 RYDCTQLISFATKLMLEAGMEAEKAIDVANILIEGDLMGHTTHGLQMLIPYLKSMESGEMALSGNYSVIKDTGNNIVLEGHFLPGPWLVKTAIEKAATR 102

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: UPI0019C1FC3D (Ldh family oxidoreductase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019C1FC3D)

HSP 1 Score: 99.8 bits (247), Expect = 1.120e-24
Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 0

Query:    3 RYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGISKSIEK 101
            +Y  + L+++A ALL K G+        AE+LVE DL+GHT+HGL +L PYLN +  G M  SGS  V+ D  A ++WDG  LPGPWL  + +  ++E+
Sbjct:    5 KYKAEDLIRYATALLDKGGLEADKSKVVAEILVEGDLLGHTTHGLQLLAPYLNDLEKGGMTKSGSPRVLADFPAAVTWDGMRLPGPWLTASAVDLALER 103

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: UPI0019B78ABA (Ldh family oxidoreductase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019B78ABA)

HSP 1 Score: 103 bits (258), Expect = 1.780e-24
Identity = 46/99 (46.46%), Postives = 64/99 (64.65%), Query Frame = 0

Query:    3 RYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGISKSIEK 101
            RY    LL FA  LL++AG++       AE+L+EADLMGHT+HG N+L PYL  + +G M   G   V+ D SA ++WDG++LPGPWLV   +  + E+
Sbjct:    7 RYLASDLLAFATTLLQRAGLSTDRAGTAAEILLEADLMGHTTHGFNLLGPYLGELESGAMTKDGEPTVVADHSAALTWDGRYLPGPWLVTQAMDVAFER 105

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: A0A1Y6G7N4_9HYPH (L-lactate dehydrogenase n=1 Tax=Devosia lucknowensis TaxID=1096929 RepID=A0A1Y6G7N4_9HYPH)

HSP 1 Score: 103 bits (257), Expect = 2.390e-24
Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 0

Query:    2 NRYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGISKSIEK 101
            NR+    L+ FA+  L   G+       TA+VLVE DLMGHT+HGL +L  YL ++ NG M   GS++V++D  AT  WDG+FLPGPWL+  G +  +E+
Sbjct:    4 NRFAAAELVAFARNALIAGGLGTAFAETTADVLVEGDLMGHTTHGLALLPAYLAALENGGMAREGSFDVLRDKQATALWDGRFLPGPWLITQGFALGVER 103

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: A0A1E4GEY4_9HYPH (Uncharacterized protein n=1 Tax=Pelagibacterium sp. SCN 64-44 TaxID=1660125 RepID=A0A1E4GEY4_9HYPH)

HSP 1 Score: 103 bits (256), Expect = 3.330e-24
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 0

Query:    3 RYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGISKSIEK 101
            R+  D L+ FA+A L  +G+      D A VLVE DLMGH++HGL +L  YL+++  G M   GS+EV++D  AT  WDG FLPGPWL+  G +  IE+
Sbjct:    5 RFVADDLVDFARAALMASGLPGHFAGDVARVLVEGDLMGHSTHGLALLPAYLSALEAGGMAREGSFEVLKDKDATALWDGHFLPGPWLISQGFALGIER 103

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: UPI001F2313B8 (Ldh family oxidoreductase n=2 Tax=Halomonas profundi TaxID=2852117 RepID=UPI001F2313B8)

HSP 1 Score: 102 bits (253), Expect = 8.830e-24
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 0

Query:    3 RYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLV 91
            +Y   +++QF+  LL  AG++D      A++LVE DLMGHT+HGL +L+PYL  I +G M +SG YEVI   +A  +WDG++LPGPWL+
Sbjct:    4 QYDVQAIIQFSTQLLAAAGLDDDKAQAVADILVEGDLMGHTTHGLQLLSPYLGEIQSGRMPVSGDYEVISQRAAVETWDGRYLPGPWLI 92

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: A0A3T1DY21_9GAMM (Lactate dehydrogenase n=13 Tax=Halomonas TaxID=2745 RepID=A0A3T1DY21_9GAMM)

HSP 1 Score: 101 bits (252), Expect = 1.250e-23
Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 0

Query:    2 NRYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLV 91
            + Y    + QF+ ALL  AG+++      AE+LVE DLMGHT+HGL +L+PYL  I +G M +SG YEVI   +A  +WDG++LPGPWL+
Sbjct:    3 HHYDVQEMTQFSTALLVAAGLDEEKAQAVAEILVEGDLMGHTTHGLQLLSPYLGEIQSGRMPVSGEYEVISKRAAVQTWDGRYLPGPWLI 92

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: A0A158E224_9BURK (Dehydrogenase n=1 Tax=Caballeronia calidae TaxID=1777139 RepID=A0A158E224_9BURK)

HSP 1 Score: 100 bits (250), Expect = 2.530e-23
Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 0

Query:    3 RYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGI 95
            RYP D L +FAQ LL +AGM D   S  A  LV+ DLMGH +HGL +L  Y+  I  G M  SG  +VI D   ++ WDG+ LPGPWLV +GI
Sbjct:    6 RYPADELQRFAQDLLSRAGMEDPKASAVASTLVDGDLMGHDTHGLALLAAYVGEIERGSMACSGEPDVISDRGPSLLWDGRRLPGPWLVLSGI 98

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: A0A520D3L0_9BURK (Ldh family oxidoreductase (Fragment) n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A520D3L0_9BURK)

HSP 1 Score: 98.6 bits (244), Expect = 2.650e-23
Identity = 44/99 (44.44%), Postives = 65/99 (65.66%), Query Frame = 0

Query:    3 RYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGISKSIEK 101
            RY   +L+ FA+ LL ++G++D   +  AE+LVE DLMGH +HGL +L PYL+ +A G M   G   V+ D  A ++WDG+ LPGPWLV   ++ + E+
Sbjct:    5 RYSYSALVDFARTLLARSGLDDAKAAAVAEILVEGDLMGHDTHGLGLLGPYLDELAAGRMEKEGRPTVLADFPAAVTWDGRRLPGPWLVVEAMALATER 103

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BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Match: A0A6G9WDI2_9RHOB (Ldh family oxidoreductase n=2 Tax=Paracoccus TaxID=265 RepID=A0A6G9WDI2_9RHOB)

HSP 1 Score: 100 bits (250), Expect = 2.690e-23
Identity = 45/101 (44.55%), Postives = 67/101 (66.34%), Query Frame = 0

Query:    1 MNRYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNMLTPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGISKSIEK 101
            M RY +D LL++A+ LL +AGM     + TA VLVE D++GH +HGL ++  YL  +A+G +N  GSYEV+ D  A   WDG+ LPG WL+   + +++E+
Sbjct:    3 MPRYHRDDLLRYAEGLLTRAGMEADKAAVTAAVLVEGDMIGHETHGLQLMHWYLECLADGSLNGKGSYEVVADKGAGFVWDGRLLPGAWLLTKALDQAMER 103

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_9942.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A356NJ21_9BACT	4.360e-25	50.51	Uncharacterized protein n=7 Tax=Verrucomicrobiales...	[more]
UPI0019C1FC3D	1.120e-24	44.44	Ldh family oxidoreductase n=1 Tax=Prolixibacterace...	[more]
UPI0019B78ABA	1.780e-24	46.46	Ldh family oxidoreductase n=1 Tax=Burkholderiales ...	[more]
A0A1Y6G7N4_9HYPH	2.390e-24	46.00	L-lactate dehydrogenase n=1 Tax=Devosia lucknowens...	[more]
A0A1E4GEY4_9HYPH	3.330e-24	47.47	Uncharacterized protein n=1 Tax=Pelagibacterium sp...	[more]
UPI001F2313B8	8.830e-24	49.44	Ldh family oxidoreductase n=2 Tax=Halomonas profun...	[more]
A0A3T1DY21_9GAMM	1.250e-23	50.00	Lactate dehydrogenase n=13 Tax=Halomonas TaxID=274...	[more]
A0A158E224_9BURK	2.530e-23	51.61	Dehydrogenase n=1 Tax=Caballeronia calidae TaxID=1...	[more]
A0A520D3L0_9BURK	2.650e-23	44.44	Ldh family oxidoreductase (Fragment) n=1 Tax=Vario...	[more]
A0A6G9WDI2_9RHOB	2.690e-23	44.55	Ldh family oxidoreductase n=2 Tax=Paracoccus TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043144	Malate/L-sulfolactate/L-lactate dehydrogenase-like, alpha-helical domain	GENE3D	1.10.1530.10		coord: 1..97 e-value: 4.9E-21 score: 76.9
IPR003767	Malate/L-lactate dehydrogenase-like	PFAM	PF02615	Ldh_2	coord: 7..101 e-value: 2.0E-21 score: 76.5
IPR003767	Malate/L-lactate dehydrogenase-like	PANTHER	PTHR11091	OXIDOREDUCTASE-RELATED	coord: 6..101
IPR036111	Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily	SUPERFAMILY	89733	L-sulfolactate dehydrogenase-like	coord: 2..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_9942	contig	C-australica_Contig_9942:23..325 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_9942.1.1	mRNA_C-australica_Contig_9942.1.1	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_9942 23..325 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_9942.1.1 ID=prot_C-australica_Contig_9942.1.1|Name=mRNA_C-australica_Contig_9942.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=101bp
MNRYPKDSLLQFAQALLKKAGMNDVMVSDTAEVLVEADLMGHTSHGLNML
TPYLNSIANGDMNLSGSYEVIQDDSATISWDGKFLPGPWLVKNGISKSIE
K

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR043144	Mal/L-sulf/L-lact_DH-like_ah
IPR003767	Malate/L-lactate_DH-like
IPR036111	Mal/L-sulfo/L-lacto_DH-like_sf