prot_C-australica_Contig_99.12.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_99.12.1
Unique Nameprot_C-australica_Contig_99.12.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length873
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_99.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 476..525
e-value: 0.0012
score: 28.1
coord: 407..456
e-value: 1.5
score: 16.7
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 472..523
score: 8.47846
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 479..523
e-value: 3.46355E-5
score: 39.8662
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 477..522
e-value: 4.9E-8
score: 33.1
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 472..527
score: 12.838076
NoneNo IPR availableGENE3D1.10.10.60coord: 469..531
e-value: 2.0E-8
score: 35.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..660
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 678..774
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 522..546
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 617..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 682..704
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 808..840
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 747..761
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..827
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..73
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 471..524
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 409..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_99contigC-australica_Contig_99:36581..43168 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_99.12.1mRNA_C-australica_Contig_99.12.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_99 36258..43288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_99.12.1 ID=prot_C-australica_Contig_99.12.1|Name=mRNA_C-australica_Contig_99.12.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=873bp
MEGLDDESDFDVDALGTQDMELWENFMSMDYPDEDNDDEDFVPDPLEDRG
DDDAEDDGPAQSGQLAGVDGRIAQNAGGAGDQCMGSASGNASAVGAANST
AAGSAKSTGQVPQVSSWRRDLAWGVQTREVAKLLREAACPLPSQHNHHKP
DIVLPTVPQDDHLLAAMLEKVSDQLNRHFQLAMQLLAQARELEPPESRDM
WLIVSHLEGKAALQGQEHEGNGHKDNAVIAQTKRCIQDLWVKRQQVRISQ
KMERDIQSRLRLAVTGPLRPRGRVRPRAASNAPGELSNRAAQKRRSREAR
ATAAAEKATTIKTRRAMLDSEDTPAEHSPFEIPALAKDVFIDAKVKRALL
DCFDSKDDPHMDYAKSGLSTACEAVATILDQQGCEVCDDMLFAVSATTAT
ASAAARPSKPFNAFEDKLLYLGYKSLDKDWIKVRGSYLPTKTPAEIENRF
KQLVLSDAPESELKLLHQSRLKEKKEREAWTEQEDSLLRGGVIKYGGNWQ
LIHQKLMPNKPEKVMAARWQKLMQGQKNARDQGKQASDADADAKAKQAVR
EVEQPLLFNPLLLCMNAQRMAEGQRQKLCAIENQMSRRGPERARRAAAAA
ARKQQWAERKGLLNLEDGKFSEDEIASSEDEARPAGAGECEAGEEFGEDE
ILSDGSEQGRGGAGIWYNQELLSGGGLEEGLDAGVFDEDELSDSDADGEE
AEALAEAPADPGYSAVELNGVRPSPEAVSGAANARGHSCDSLADGGGKQQ
PEKEDDKSRAGGDQGGSSQDSRLLNLTDSLPDIFLGGDLSNLSNLGLSRL
EGGLPYSMDAMDSNNRERERQEEGQGDAGDAAGDAAGAQSQAVSKGAPIF
QVHWLACLLLPPLTQFLSRRCL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf