prot_C-australica_Contig_98.19.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_98.19.1
Unique Nameprot_C-australica_Contig_98.19.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length288
Homology
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BLAST of mRNA_C-australica_Contig_98.19.1 vs. uniprot
Match: D7FVS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVS9_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.170e-18
Identity = 49/121 (40.50%), Postives = 67/121 (55.37%), Query Frame = 0 
Query:   25 LAVASESPAAVRKLMLRWRHHFTRELGRKLAELDVRRDSFLSELSSKSIDGNDKAYA--VSHQVRRFHSWLLEERLRLLRCVELRCEECWRRVLSAKDDHGRTALHWAASLKGSEEVMEAL 143
            +AV +++   V+ LM  WR    + L  +L  LD RRD F+  +      G  +         V RF  WL +ER RL+R  ELRCEECWR+ ++++DD GRT LHWAAS   SE  +  L
Sbjct:    1 MAVGTKNVRMVKTLMQYWRRDLNQRLEDELDFLDHRRDMFIQGVDVPQTTGGGRPAGKITIDDVDRFERWLFDERRRLVRVTELRCEECWRKSVTSRDDRGRTPLHWAASGTSSEAALLVL 121
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BLAST of mRNA_C-australica_Contig_98.19.1 vs. uniprot
Match: A0A8J2SL70_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL70_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.900e-5
Identity = 47/146 (32.19%), Postives = 67/146 (45.89%), Query Frame = 0 
Query:    8 GDQAALLRGTEGCTALHLAVASESPAAVRKLMLRWRHHFTRELGRKLAELDVRRDSFLSELSSKSIDGNDKAYAVSHQVRRFHSWLLEERLRLLRCVELRCEECWRRVLSAKDDHGRTALHWAASLKGSEEVMEAL--LRTGRANL 151
            G + AL+   +G TA H A        ++     WR   + E  RK+++L  R    L E S      N     V H++R  + +   E  R LR  ELRCE  WR   +A+DD GRT LH+A +   +      +  L TG A+L
Sbjct:  304 GLRCALVADQKGRTACHYAALQGRHDVLQSFGEAWRAQASEEYDRKVSDLRGR----LVEASRDCRRRN-----VEHELRGAYEFAAREADRELRQRELRCEAAWRTCCTARDDLGRTPLHYAVACVDAAHTALTVKALMTGSADL 440
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BLAST of mRNA_C-australica_Contig_98.19.1 vs. uniprot
Match: A0A7S2AZM3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZM3_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.210e-5
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0 
Query:   89 FHSWLLEERLRLLRCVELRCEECWRRVLSAKDDHGRTALHWAASLKGSE----EVMEALLRT-GRANLGHDEAPHQSAMDDA 165
            F  W+ +E  R+ R  EL CE  WRRV++A D  GRTALH+AA+   S+      + AL R+  RA++    A      +DA
Sbjct:   78 FMDWVSDEADRITRSCELSCEAAWRRVVTAVDKQGRTALHYAAACAPSDVAASSTIAALWRSDARADINRLSAARLEPKEDA 159
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_98.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVS9_ECTSI1.170e-1840.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8J2SL70_9STRA4.900e-532.19Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2AZM3_9STRA5.210e-539.02Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 18..48
e-value: 1100.0
score: 4.8
coord: 122..153
e-value: 0.02
score: 24.0
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 122..151
e-value: 4.4E-4
score: 20.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 122..147
score: 8.84318
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..175
e-value: 6.7E-10
score: 40.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 16..159
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 122..147
score: 8.74663

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_98contigC-australica_Contig_98:60425..62356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_98.19.1mRNA_C-australica_Contig_98.19.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_98 60415..62356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_98.19.1 ID=prot_C-australica_Contig_98.19.1|Name=mRNA_C-australica_Contig_98.19.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=288bp
MEAEKLHGDQAALLRGTEGCTALHLAVASESPAAVRKLMLRWRHHFTREL
GRKLAELDVRRDSFLSELSSKSIDGNDKAYAVSHQVRRFHSWLLEERLRL
LRCVELRCEECWRRVLSAKDDHGRTALHWAASLKGSEEVMEALLRTGRAN
LGHDEAPHQSAMDDALLSRAVELIGKGREPTVIQQHLEQIRHGFTARHCK
GHPLFPRNEMFHFYTGTAETFDSARLSTADPRAPLDGQMREGTPTGMNRS
QPPSIAKVAWFCRTLGDRASAAAKASSRGEIEYRLHC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf