prot_C-australica_Contig_976.6.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_976.6.1
Unique Nameprot_C-australica_Contig_976.6.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length411
Homology
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BLAST of mRNA_C-australica_Contig_976.6.1 vs. uniprot
Match: D7FX47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX47_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 5.720e-9
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 0 
Query:    1 MTAERCMGIIAKIYQSKEGLDATLSQRYMGGASH----KRRRFQRFDRFVLQYHIQLYGTKKLARKKLQYLCKAATHHGLTNPRL 81
            ++AER    IAKIY SK  +D  L  R  G  S     +R++ QR DRFVLQ+H++ +GTKKLAR+ L  LCK+ T    TNPR+
Sbjct:  402 LSAERVNATIAKIYFSKMQVDRKLLTRD-GSLSWVDKCRRKKDQRMDRFVLQFHVRQFGTKKLARRNLHQLCKSITKLAPTNPRI 485
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BLAST of mRNA_C-australica_Contig_976.6.1 vs. uniprot
Match: A0A6H5K7X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X3_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.090e-8
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0 
Query:    1 MTAERCMGIIAKIYQSKEGLDATLSQRYMGGAS----HKRRRFQRFDRFVLQYHIQLYGTKKLARKKLQYLCKAATHHGLTNPRL 81
            ++AER    IAKIY SK  +D  L  R  G  S     +R++ QR DRFVLQ+H++ +GTKKLAR+ L  LCK+      TNPR+
Sbjct:  516 LSAERVNAAIAKIYYSKMQVDRKLLIRD-GSLSWVDKSRRKKDQRMDRFVLQFHVRQFGTKKLARRNLHQLCKSIAKLAPTNPRI 599
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_976.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX47_ECTSI5.720e-948.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7X3_9PHAE2.090e-847.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 301..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_976contigC-australica_Contig_976:13990..17088 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_976.6.1mRNA_C-australica_Contig_976.6.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_976 13867..17555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_976.6.1 ID=prot_C-australica_Contig_976.6.1|Name=mRNA_C-australica_Contig_976.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=411bp
MTAERCMGIIAKIYQSKEGLDATLSQRYMGGASHKRRRFQRFDRFVLQYH
IQLYGTKKLARKKLQYLCKAATHHGLTNPRLKLFCWLAGVAVRVSARPPV
YQKLDFHAYACSDFLIPILGLLFQSADDVDGTLERWLGSGKESVKVSIPS
LLTAMRSVCRLLPDNHPKMVDFSIKMNQLGENGTAAGVATGSTAKGDKGE
QENASSIATGKASKKVKAVMRGAQQRSSQSPTTTSEKRWHEAMSVRTVDL
DKALLAAMEVFLAEMEQRVMVVSLRSITLLQRWLRHSRLRRLQKEGVVVS
AQEEELNNRSQEELLESAKLARTKLEGLMREATEEELGTNSTLMTQLEAS
QNAAEAGVLQGMIHQKGDERETHTAKGDDASMLMLDGFAGANAVTSDHDR
AGLESEADAG*
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