prot_C-australica_Contig_9729.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_9729.1.1
Unique Nameprot_C-australica_Contig_9729.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length85
Homology
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: A0A2E7CUN4_9FLAO (50S ribosomal protein L25 n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2E7CUN4_9FLAO)

HSP 1 Score: 82.8 bits (203), Expect = 1.280e-17
Identity = 45/68 (66.18%), Postives = 53/68 (77.94%), Query Frame = 0
Query:    2 QVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGAVEDEE 69
            Q FRRLQV+GL  D+PE++ +DIT+LRIG   RVSD+S     L FLDPANAVVV V+TAR AVEDEE
Sbjct:  122 QNFRRLQVMGLVNDMPEDVTIDITSLRIGHKKRVSDLSISG--LKFLDPANAVVVGVQTARAAVEDEE 187          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: A0A5C8AF79_9FLAO (50S ribosomal protein L25 n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A5C8AF79_9FLAO)

HSP 1 Score: 77.0 bits (188), Expect = 1.320e-15
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 MQVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGA 64
            +QVFRRL VVGLP  LP+ + +DIT LRIG S RV  +   N  L FL+PANAVVV+VK ARGA
Sbjct:  121 LQVFRRLTVVGLPSSLPDAITIDITKLRIGQSIRVGQIE--NSDLKFLEPANAVVVSVKMARGA 182          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: A0A2D9ISU4_9FLAO (50S ribosomal protein L25 n=2 Tax=Flavobacteriales TaxID=200644 RepID=A0A2D9ISU4_9FLAO)

HSP 1 Score: 76.6 bits (187), Expect = 3.230e-15
Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 0
Query:    2 QVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGAVEDEE 69
            Q FR+LQV GL  D+PE +V+DIT +RIG   RVSD++     L FLDP NAVVV V+TAR AVED+E
Sbjct:  122 QNFRKLQVFGLEKDMPEAIVIDITPIRIGQKRRVSDIAVSG--LTFLDPKNAVVVGVQTARAAVEDDE 187          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: F2IBD3_FLUTR (50S ribosomal protein L25 n=2 Tax=Fluviicola TaxID=332102 RepID=F2IBD3_FLUTR)

HSP 1 Score: 75.9 bits (185), Expect = 3.670e-15
Identity = 41/64 (64.06%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 MQVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGA 64
            MQVFRRL+VVGLP DLPE +V+DIT LRIG S RV D+   N  L   +  NAVVV+VK ARGA
Sbjct:  121 MQVFRRLRVVGLPADLPEAIVIDITKLRIGQSVRVKDLE--NDGLTISEAKNAVVVSVKMARGA 182          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: A0A316KF10_9FLAO (50S ribosomal protein L25 n=1 Tax=Fluviicola sp. XM-24bin1 TaxID=2133950 RepID=A0A316KF10_9FLAO)

HSP 1 Score: 75.5 bits (184), Expect = 6.450e-15
Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 0
Query:    2 QVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGAVEDEE 69
            Q +R+L+V+GLPG LPE + V+I  LRIG S R+SD++     + FL+PANAV++AVK ARGAV DEE
Sbjct:  122 QPYRKLRVIGLPGALPEAISVEIGELRIGQSVRISDLNVEG--VTFLEPANAVILAVKMARGAVADEE 187          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: A0A2D9D6J0_9FLAO (50S ribosomal protein L25 n=1 Tax=Crocinitomicaceae bacterium TaxID=2026728 RepID=A0A2D9D6J0_9FLAO)

HSP 1 Score: 75.5 bits (184), Expect = 8.080e-15
Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0
Query:    1 MQVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGAVEDE 68
            +QVFRRL  +GLP DLPE + +D++ LRIG S R+S +    P +  LDPANAVVV+VK AR A+E+E
Sbjct:  121 LQVFRRLSCLGLPKDLPEAISIDVSKLRIGNSIRISSIQL--PGVTILDPANAVVVSVKMARNAIEEE 186          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: A0A1G0C6H1_9FLAO (50S ribosomal protein L25 n=1 Tax=Fluviicola sp. RIFCSPHIGHO2_12_FULL_43_24 TaxID=1798019 RepID=A0A1G0C6H1_9FLAO)

HSP 1 Score: 74.7 bits (182), Expect = 1.060e-14
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 0
Query:    1 MQVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGA 64
            +QV+RRL+V+ LPGDLPE ++VDIT LRIG S RV D+      + F D  +AVVV+VK ARGA
Sbjct:  121 LQVYRRLKVIALPGDLPEAIIVDITKLRIGQSIRVGDLETEAKGIKFSDAKSAVVVSVKMARGA 184          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: UPI001C8D5461 (50S ribosomal protein L25/general stress protein Ctc n=1 Tax=Crocinitomix sp. GM2_3_6_6 TaxID=2862509 RepID=UPI001C8D5461)

HSP 1 Score: 73.6 bits (179), Expect = 3.790e-14
Identity = 35/67 (52.24%), Postives = 52/67 (77.61%), Query Frame = 0
Query:    2 QVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGAVEDE 68
            Q+FR+L+V  +PG+LP+E+V+D++ LRIG + RV D+   N  L  L+PA+AV+ ++KTARGAV DE
Sbjct:  122 QIFRKLKVYAVPGELPDEIVIDVSKLRIGQAIRVRDL---NNGLEILNPASAVICSIKTARGAVADE 185          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: A0A1F3VRX0_9BACT (50S ribosomal protein L25 n=1 Tax=Bacteroidetes bacterium RIFCSPHIGHO2_02_FULL_44_7 TaxID=1797361 RepID=A0A1F3VRX0_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 4.050e-14
Identity = 34/66 (51.52%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    2 QVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGAVED 67
            Q +R L++ GLP DLPE + VD+T +RIG + R++D++   P + FL+PANAV+++VK ARGAV D
Sbjct:  123 QAYRTLRMAGLPADLPESVTVDVTKMRIGHAVRIADLNV--PGVTFLEPANAVILSVKMARGAVAD 186          
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Match: A0A2G2F828_9FLAO (50S ribosomal protein L25 n=1 Tax=Fluviicola sp. TaxID=1917219 RepID=A0A2G2F828_9FLAO)

HSP 1 Score: 73.6 bits (179), Expect = 4.190e-14
Identity = 39/68 (57.35%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    2 QVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDPANAVVVAVKTARGAVEDEE 69
            Q +R+L+VVGLPGDLPE + +D+ +LRIG S RVSD++ +N  ++FL+PA AVV+ VK ARGAV+++E
Sbjct:  122 QPYRKLRVVGLPGDLPELITMDVASLRIGDSIRVSDIN-ING-VDFLEPAAAVVLGVKMARGAVDEDE 187          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9729.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7CUN4_9FLAO1.280e-1766.1850S ribosomal protein L25 n=1 Tax=Crocinitomicacea... [more]
A0A5C8AF79_9FLAO1.320e-1562.5050S ribosomal protein L25 n=1 Tax=Crocinitomicacea... [more]
A0A2D9ISU4_9FLAO3.230e-1560.2950S ribosomal protein L25 n=2 Tax=Flavobacteriales... [more]
F2IBD3_FLUTR3.670e-1564.0650S ribosomal protein L25 n=2 Tax=Fluviicola TaxID... [more]
A0A316KF10_9FLAO6.450e-1557.3550S ribosomal protein L25 n=1 Tax=Fluviicola sp. X... [more]
A0A2D9D6J0_9FLAO8.080e-1555.8850S ribosomal protein L25 n=1 Tax=Crocinitomicacea... [more]
A0A1G0C6H1_9FLAO1.060e-1457.8150S ribosomal protein L25 n=1 Tax=Fluviicola sp. R... [more]
UPI001C8D54613.790e-1452.2450S ribosomal protein L25/general stress protein C... [more]
A0A1F3VRX0_9BACT4.050e-1451.5250S ribosomal protein L25 n=1 Tax=Bacteroidetes ba... [more]
A0A2G2F828_9FLAO4.190e-1457.3550S ribosomal protein L25 n=1 Tax=Fluviicola sp. T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..84
IPR037121Ribosomal protein L25, C-terminalGENE3D2.170.120.20Ribosomal protein L25, beta domaincoord: 1..72
e-value: 5.0E-10
score: 41.5
IPR020057Ribosomal protein L25, beta domainPFAMPF14693Ribosomal_TL5_Ccoord: 2..61
e-value: 1.2E-11
score: 44.7
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 2..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9729contigC-australica_Contig_9729:18..272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9729.1.1mRNA_C-australica_Contig_9729.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_9729 3..272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_9729.1.1 ID=prot_C-australica_Contig_9729.1.1|Name=mRNA_C-australica_Contig_9729.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=85bp
MQVFRRLQVVGLPGDLPEEMVVDITNLRIGMSTRVSDVSAVNPKLNFLDP
ANAVVVAVKTARGAVEDEEEEEAAEEEATEEAAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037121Ribosomal_L25_C
IPR020057Ribosomal_L25_b-dom
IPR011035Ribosomal_L25/Gln-tRNA_synth