prot_C-australica_Contig_971.3.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_971.3.1
Unique Nameprot_C-australica_Contig_971.3.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length55
Homology
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BLAST of mRNA_C-australica_Contig_971.3.1 vs. uniprot
Match: D7FMQ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMQ3_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.700e-9
Identity = 22/38 (57.89%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    1 MNAHKVVTPKPRCPHCSIREPCGHCQYDRAREKLINYC 38
            ++AH V  PKPRCP C+IR PCGHC YD++R  L  +C
Sbjct:  305 LDAHVVEVPKPRCPQCTIRLPCGHCDYDQSRRSLHTFC 342
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_971.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMQ3_ECTSI2.700e-957.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_971contigC-australica_Contig_971:1338..1806 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_971.3.1mRNA_C-australica_Contig_971.3.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_971 1338..2046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_971.3.1 ID=prot_C-australica_Contig_971.3.1|Name=mRNA_C-australica_Contig_971.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=55bp
MNAHKVVTPKPRCPHCSIREPCGHCQYDRAREKLINYCNESIGKWELTKQ
GFIEG
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