prot_C-australica_Contig_1049.4.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1049.4.1
Unique Nameprot_C-australica_Contig_1049.4.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length205
Homology
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A1D1YMJ8_9ARAE (E3 ubiquitin-protein ligase RING1 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YMJ8_9ARAE)

HSP 1 Score: 119 bits (298), Expect = 5.110e-30
Identity = 53/96 (55.21%), Postives = 69/96 (71.88%), Query Frame = 0
Query:  108 GDYAFGD-LSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLPA 202
            GDY  G  L  LL+HL  +DPN +G PPA   A+DALPTV+ Q   ++ C+VC+E+F  G+ AKEMPCKH FHS C++PWL+ H+SCP CR  +PA
Sbjct:   46 GDYFLGPGLDLLLQHLAENDPNRYGTPPAKKEAVDALPTVKVQE--NLNCSVCLEDFSHGEEAKEMPCKHRFHSSCLLPWLELHSSCPICRFQIPA 139          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A6H5JIQ8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ8_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 1.320e-29
Identity = 53/112 (47.32%), Postives = 73/112 (65.18%), Query Frame = 0
Query:   93 GASNVGTQLGEWETEGDYAFGDLSRLLEHLMSSDPNIHGPPPADAAAIDALPTV---QGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLP 201
            G   +G  +G     GDYAFGDLS+L++ LM++D N HGPPPA    ++ LPT+   +G  L   EC VC + F  G+ A+E+PC+H FH +CI+PW+   N+CPTCR  LP
Sbjct:  341 GGMGLGLXMGPGGNVGDYAFGDLSQLIQQLMAADTNRHGPPPASKKFVENLPTITVAKGSELEGQECAVCKDEFAAGEKARELPCQHSFHEQCILPWVAERNTCPTCRHELP 452          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A8J5C4E3_ZINOF (RING-type E3 ubiquitin transferase n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5C4E3_ZINOF)

HSP 1 Score: 121 bits (303), Expect = 1.490e-29
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 0
Query:   86 GSPAQEEGASNVGTQLGEWETEGDYAFGD-LSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLPA 202
            G+  QE   S VG       + GDY  G  L  LL+HL  +DPN +G PPA   AIDALPTV+ +    I C++C+E+F  G  AKEMPCKH FHSECI+PWLQ H+SCP CR  LPA
Sbjct:  159 GNEGQESNNSGVGAA-----SLGDYFIGPGLDILLQHLADNDPNKYGTPPAKKEAIDALPTVRIEEEA-IGCSICLEDFDVGLEAKEMPCKHKFHSECILPWLQLHSSCPLCRSQLPA 270          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A7S2XZI6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZI6_9STRA)

HSP 1 Score: 115 bits (288), Expect = 2.320e-29
Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 0
Query:   93 GASNVGTQLGEWETEGDYAFGDLSRLLEHLMSSDPNIHGPPPADAAAIDALPT--VQGQHLG-HIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCR 197
            GA+  G QLG      DY  G+++ +++ LM +DPN HGPPPA    I++L T  VQ   L  + EC VCM +FG G+ AK++PCKH FH  CIVPWL+ HNSCP CR
Sbjct:    2 GAAGGGMQLG------DYVLGNMAGIIDQLMQNDPNQHGPPPAPPEVIESLKTIVVQTDELDKNKECAVCMNDFGYGEQAKQVPCKHLFHEACIVPWLKQHNSCPVCR 103          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A8J5CCL2_ZINOF (RING-type E3 ubiquitin transferase n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5CCL2_ZINOF)

HSP 1 Score: 121 bits (303), Expect = 6.860e-29
Identity = 63/118 (53.39%), Postives = 76/118 (64.41%), Query Frame = 0
Query:   86 GSPAQEEGASNVGTQLGEWETEGDYAFGD-LSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLPA 202
            G+  QE   S VG       + GDY  G  L  LL+HL  +DPN +G PPA   AIDALPTV+ +    I C++C+E+F  G  AKEMPCKH FHSECI+PWLQ H+SCP CR  LPA
Sbjct:  261 GNEGQESNNSGVGAA-----SLGDYFIGPGLDILLQHLADNDPNKYGTPPAKKEAIDALPTVRIEEEA-IGCSICLEDFDVGLEAKEMPCKHKFHSECILPWLQLHSSCPLCRSQLPA 372          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A7I8JGD3_SPIIN (RING-type E3 ubiquitin transferase n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JGD3_SPIIN)

HSP 1 Score: 119 bits (298), Expect = 9.840e-29
Identity = 53/96 (55.21%), Postives = 69/96 (71.88%), Query Frame = 0
Query:  108 GDYAFGD-LSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLPA 202
            GDY  G  L  LL+HL  +DPN +G PPA   A+DALPTV+ +   ++ C+VC+E+F  G+ AKEMPCKH FHS CI+PWL+ H+SCP CR  +PA
Sbjct:  154 GDYFVGSGLDLLLQHLSENDPNRYGTPPAKKEAVDALPTVKVEE--NLSCSVCLEDFARGEEAKEMPCKHRFHSGCILPWLELHSSCPVCRLQIPA 247          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A161Y3F1_DAUCS (RING-type E3 ubiquitin transferase n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A161Y3F1_DAUCS)

HSP 1 Score: 119 bits (298), Expect = 1.720e-28
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0
Query:  108 GDYAFGD-LSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLP 201
            GDY  G  L  LL+HL  +DPN +G PPA   A++ALPTV+    G+++C+VC+E+F  G  AKEMPCKH FHSECI PWL+ H+SCP CR  LP
Sbjct:  217 GDYFIGPGLDLLLQHLAENDPNRYGTPPARKEAVEALPTVKVD--GNLQCSVCLEDFEVGAEAKEMPCKHRFHSECIFPWLELHSSCPVCRHQLP 309          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A7I8L944_SPIIN (RING-type E3 ubiquitin transferase n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L944_SPIIN)

HSP 1 Score: 118 bits (295), Expect = 1.860e-28
Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 0
Query:  108 GDYAFGD-LSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLPA 202
            GDY  G  L  LL+HL  +DPN +G PPA   A+DALPTV+ +   ++ C+VC+E+F  G+ AKEMPCKH FH+ CI+PWL+ H+SCP CR  +PA
Sbjct:  168 GDYFVGSGLDLLLQHLSENDPNRYGTPPAKKEAVDALPTVKVEE--NLSCSVCLEDFARGEEAKEMPCKHRFHNGCILPWLELHSSCPVCRLQIPA 261          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A6L5B9R6_APIGR (RING-type E3 ubiquitin transferase n=1 Tax=Apium graveolens TaxID=4045 RepID=A0A6L5B9R6_APIGR)

HSP 1 Score: 119 bits (297), Expect = 2.430e-28
Identity = 53/95 (55.79%), Postives = 68/95 (71.58%), Query Frame = 0
Query:  108 GDYAFGD-LSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLP 201
            GDY  G  L  LL+HL  +DPN +G PPA   A++ALPTV+    G+++C+VC+E+F  G  AKEMPCKH FHS+CI PWL+ H+SCP CR  LP
Sbjct:  218 GDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVKVD--GNLQCSVCLEDFEVGAEAKEMPCKHRFHSDCIFPWLELHSSCPVCRHQLP 310          
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Match: A0A1R3GIB0_9ROSI (RING-type E3 ubiquitin transferase n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3GIB0_9ROSI)

HSP 1 Score: 115 bits (288), Expect = 3.270e-28
Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 0
Query:  101 LGEWETEGDYAFGD-LSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQHLGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGLPA 202
            LG   + GDY  G  L  LL+HL  +DPN +G PPA   AI+ALPTV+ +   +++C+VC+++F  G  AKEMPCKH FH+ CI+PWL+ H+SCP CR  LPA
Sbjct:   63 LGMMGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKDAIEALPTVKIEE--NLQCSVCLDDFEVGTEAKEMPCKHKFHNGCILPWLELHSSCPVCRYQLPA 163          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1049.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1D1YMJ8_9ARAE5.110e-3055.21E3 ubiquitin-protein ligase RING1 (Fragment) n=1 T... [more]
A0A6H5JIQ8_9PHAE1.320e-2947.32RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A8J5C4E3_ZINOF1.490e-2953.39RING-type E3 ubiquitin transferase n=1 Tax=Zingibe... [more]
A0A7S2XZI6_9STRA2.320e-2950.93Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J5CCL2_ZINOF6.860e-2953.39RING-type E3 ubiquitin transferase n=2 Tax=Zingibe... [more]
A0A7I8JGD3_SPIIN9.840e-2955.21RING-type E3 ubiquitin transferase n=1 Tax=Spirode... [more]
A0A161Y3F1_DAUCS1.720e-2856.84RING-type E3 ubiquitin transferase n=1 Tax=Daucus ... [more]
A0A7I8L944_SPIIN1.860e-2854.17RING-type E3 ubiquitin transferase n=1 Tax=Spirode... [more]
A0A6L5B9R6_APIGR2.430e-2855.79RING-type E3 ubiquitin transferase n=1 Tax=Apium g... [more]
A0A1R3GIB0_9ROSI3.270e-2852.43RING-type E3 ubiquitin transferase n=1 Tax=Corchor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 156..196
e-value: 1.6E-7
score: 41.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 155..197
e-value: 5.7E-14
score: 52.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 156..197
score: 12.445019
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 123..203
e-value: 1.2E-20
score: 75.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..38
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 101..201
NoneNo IPR availablePANTHERPTHR15710:SF22RING/U-BOX SUPERFAMILY PROTEINcoord: 101..201
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 145..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1049contigC-australica_Contig_1049:13573..14824 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1049.4.1mRNA_C-australica_Contig_1049.4.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1049 12113..14991 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1049.4.1 ID=prot_C-australica_Contig_1049.4.1|Name=mRNA_C-australica_Contig_1049.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=205bp
MPGTASSPTPSLADPLHSERGGGSMTATTSTLTTSSSTSTGPAVVPALLP
EGNDIVNSLQQILVSLLGSGAEASPSMNHLTALLSGSPAQEEGASNVGTQ
LGEWETEGDYAFGDLSRLLEHLMSSDPNIHGPPPADAAAIDALPTVQGQH
LGHIECTVCMENFGTGDNAKEMPCKHHFHSECIVPWLQAHNSCPTCRKGL
PAIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD