prot_C-australica_Contig_10428.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10428.1.1
Unique Nameprot_C-australica_Contig_10428.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length143
Homology
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: A0A2E1LUD7_9PROT (Transcriptional repressor NrdR n=2 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A2E1LUD7_9PROT)

HSP 1 Score: 230 bits (586), Expect = 1.920e-75
Identity = 117/141 (82.98%), Postives = 131/141 (92.91%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALED 141
            TAVKDSRPAEDN+AVRRRRGCD CGARFTTFERVQLREI V+KRDGKRS+F+R+KL RSVSIALRKRPV+ E IDQ+VS +VR+LESSGE EM+SADIG+MVMESLR VDPVGYVRYASVY+DF DPSDFA FIEQ+AL+D
Sbjct:   11 TAVKDSRPAEDNSAVRRRRGCDTCGARFTTFERVQLREIIVIKRDGKRSMFEREKLARSVSIALRKRPVTPEHIDQLVSAIVRQLESSGELEMASADIGEMVMESLRSVDPVGYVRYASVYRDFGDPSDFAQFIEQSALDD 151          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: UPI0008D9945B (transcriptional regulator NrdR n=1 Tax=Hyphomonas sp. Mor2 TaxID=1906738 RepID=UPI0008D9945B)

HSP 1 Score: 217 bits (553), Expect = 2.050e-70
Identity = 111/142 (78.17%), Postives = 126/142 (88.73%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALEDD 142
            TAVKDSRPAEDN AVRRRRGCDNCGARFTTFERVQLREI V+KRDGKR  F R+KL R ++IALRKRPVS EQIDQIVSG+ RKLESSGE+E++S DIG++ MESLR VDPVGYVRYASVY+DF  PSDFA FI+Q+ L++D
Sbjct:   11 TAVKDSRPAEDNTAVRRRRGCDNCGARFTTFERVQLREIMVVKRDGKRVPFQREKLARVITIALRKRPVSTEQIDQIVSGIARKLESSGETEVASQDIGELAMESLRVVDPVGYVRYASVYRDFDAPSDFAAFIKQSELDED 152          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: A0A399RF13_9PROT (Transcriptional repressor NrdR n=2 Tax=Henriciella TaxID=453849 RepID=A0A399RF13_9PROT)

HSP 1 Score: 212 bits (540), Expect = 2.230e-68
Identity = 106/141 (75.18%), Postives = 127/141 (90.07%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALED 141
            TAVKDSRPAEDN AVRRRR C+ CG RFTTFERVQLREI V+KRDGKR++FDRDK+ +SV+IALRKR V  E ++++VSG+VRKLESSGE+E++SA+IG +VMESL+ VDPVGYVRYASVYKDF+DPSDFA FIE +AL+D
Sbjct:   11 TAVKDSRPAEDNTAVRRRRACEVCGGRFTTFERVQLREIIVVKRDGKRALFDRDKVAKSVTIALRKRAVGDESVERLVSGIVRKLESSGETEVTSAEIGDLVMESLKTVDPVGYVRYASVYKDFKDPSDFARFIETSALDD 151          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: A0A059FVT7_9PROT (Transcriptional repressor NrdR n=4 Tax=Hyphomonas TaxID=85 RepID=A0A059FVT7_9PROT)

HSP 1 Score: 212 bits (540), Expect = 2.300e-68
Identity = 105/142 (73.94%), Postives = 129/142 (90.85%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALEDD 142
            TAVKDSR AED+  VRRRR C++CGARFTTFERVQLREI V+KRDGKRSVF+RDKL RS+SIA+RKRPV  ++IDQ+VSG+VRKLES GE E+ S+++G++VME+L+ VDPVGYVRYASVY+DF+DPSDFA FIE+TALE++
Sbjct:   11 TAVKDSRSAEDDTVVRRRRVCESCGARFTTFERVQLREIVVIKRDGKRSVFERDKLSRSISIAVRKRPVDRDRIDQMVSGIVRKLESGGEPEVQSSEVGELVMEALKRVDPVGYVRYASVYRDFKDPSDFAQFIEKTALEEE 152          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: A0A353YP27_9PROT (Transcriptional repressor NrdR n=11 Tax=root TaxID=1 RepID=A0A353YP27_9PROT)

HSP 1 Score: 211 bits (537), Expect = 6.380e-68
Identity = 105/142 (73.94%), Postives = 126/142 (88.73%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALEDD 142
            T+VKDSR AEDN AVRRRR C++CGARFTTFERVQLREITV+KRDGKR  FDRD+L RS++IALRKRPV  +QIDQ+VSG+ R LES+GE+E+SS D+G+  ME+LR VDPVGYVR+ASVYKDF+DP+DFA FIE TAL+D+
Sbjct:   11 TSVKDSRSAEDNTAVRRRRVCESCGARFTTFERVQLREITVVKRDGKRVPFDRDRLTRSITIALRKRPVDRDQIDQMVSGIARNLESAGETEVSSNDVGEFAMEALRRVDPVGYVRFASVYKDFKDPNDFAQFIENTALDDE 152          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: UPI000A02BD18 (transcriptional regulator NrdR n=1 Tax=Henriciella pelagia TaxID=1977912 RepID=UPI000A02BD18)

HSP 1 Score: 211 bits (536), Expect = 9.070e-68
Identity = 104/141 (73.76%), Postives = 127/141 (90.07%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALED 141
            TAVKDSRPAEDN AVRRRR C+ CG RFTTFERVQLR+I V+KRDGKR++FDR+K+ +SV+IALRKR V  E ++Q+VSG+VRKLESSGE+E+SS DIG++VM++L+ VDPVGYVRYASVYK+F+DPSDFA FIE +ALED
Sbjct:   11 TAVKDSRPAEDNTAVRRRRACEVCGGRFTTFERVQLRDIIVVKRDGKRAIFDREKVAKSVTIALRKRAVGDESVEQLVSGIVRKLESSGETEVSSEDIGELVMDALKTVDPVGYVRYASVYKNFKDPSDFARFIESSALED 151          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: UPI000A02A495 (transcriptional regulator NrdR n=1 Tax=Henriciella litoralis TaxID=568102 RepID=UPI000A02A495)

HSP 1 Score: 210 bits (535), Expect = 1.290e-67
Identity = 104/141 (73.76%), Postives = 127/141 (90.07%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALED 141
            TAVKDSRPAEDN AVRRRR C+ CG RFTTFERVQLREI V+KRDGKR+VFDR+K+ RSV IALRKRPV  E ++++VSG+VRKLESSGE+E+ S++IG++VME+L+ VDPVGYVRYASVYKDF+DPSDFA FIE ++L++
Sbjct:   11 TAVKDSRPAEDNTAVRRRRACEVCGGRFTTFERVQLREIIVVKRDGKRAVFDREKVARSVMIALRKRPVGDESVERLVSGIVRKLESSGETELLSSEIGELVMEALKTVDPVGYVRYASVYKDFKDPSDFAQFIETSSLDE 151          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: A0A069E1L4_9PROT (Transcriptional repressor NrdR n=8 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A069E1L4_9PROT)

HSP 1 Score: 210 bits (534), Expect = 1.950e-67
Identity = 104/142 (73.24%), Postives = 128/142 (90.14%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALEDD 142
            T+VKDSR AED+ AVRRRR C++CGARFTTFERVQLRE+TV+KRDGKR  FDR++L +S++IALRKRPV  EQIDQ+VSG++RKLES+GE E++S D+G++ ME+LR VDPVGYVR+ASVYKDFRDPSDFA FIE+ ALED+
Sbjct:   11 TSVKDSRSAEDDTAVRRRRVCESCGARFTTFERVQLREVTVVKRDGKRVPFDRERLTKSITIALRKRPVDREQIDQMVSGILRKLESAGEPEVASNDVGELAMEALRMVDPVGYVRFASVYKDFRDPSDFAQFIEKAALEDE 152          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: NRDR_HYPNA (Transcriptional repressor NrdR n=3 Tax=Hyphomonas TaxID=85 RepID=NRDR_HYPNA)

HSP 1 Score: 209 bits (533), Expect = 2.860e-67
Identity = 104/142 (73.24%), Postives = 129/142 (90.85%), Query Frame = 0
Query:    1 TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALEDD 142
            T+VKDSR AED+ AVRRRR C++CGARFTTFERVQLREI V+KRDGKRS+FDR+KL RS+ IALRKRPV  ++IDQ+VSG+VRKLES GE+E+ S+++G++VME+L+ VDPVGYVRYASVY+DF+DPSDFA FIE+ ALED+
Sbjct:   11 TSVKDSRAAEDDTAVRRRRVCESCGARFTTFERVQLREIIVVKRDGKRSLFDREKLQRSILIALRKRPVDRDRIDQMVSGIVRKLESGGETEVPSSEVGELVMEALKRVDPVGYVRYASVYRDFKDPSDFAQFIEKAALEDE 152          
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Match: A0A059ED16_9PROT (Transcriptional repressor NrdR n=2 Tax=Hyphomonas sp. L-53-1-40 TaxID=1207058 RepID=A0A059ED16_9PROT)

HSP 1 Score: 207 bits (527), Expect = 1.440e-66
Identity = 104/140 (74.29%), Postives = 123/140 (87.86%), Query Frame = 0
Query:    3 VKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSVFDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQMVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALEDD 142
            +KDSR AEDN AVRRRR C+ CGARFTTFERVQLREI V+KRDGKR  FDRD+L RS++IALRKRPV  EQIDQ+VSG+ RKLES GE+E++S ++G+  ME+LR VDPVGYVR+ASVYKDFRDP+DFA FIEQT+LED+
Sbjct:    1 MKDSRSAEDNTAVRRRRVCEACGARFTTFERVQLREIMVVKRDGKRVPFDRDRLTRSITIALRKRPVDREQIDQMVSGIARKLESGGETEVTSNEVGEFAMEALRQVDPVGYVRFASVYKDFRDPNDFAQFIEQTSLEDE 140          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10428.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E1LUD7_9PROT1.920e-7582.98Transcriptional repressor NrdR n=2 Tax=Hyphomonada... [more]
UPI0008D9945B2.050e-7078.17transcriptional regulator NrdR n=1 Tax=Hyphomonas ... [more]
A0A399RF13_9PROT2.230e-6875.18Transcriptional repressor NrdR n=2 Tax=Henriciella... [more]
A0A059FVT7_9PROT2.300e-6873.94Transcriptional repressor NrdR n=4 Tax=Hyphomonas ... [more]
A0A353YP27_9PROT6.380e-6873.94Transcriptional repressor NrdR n=11 Tax=root TaxID... [more]
UPI000A02BD189.070e-6873.76transcriptional regulator NrdR n=1 Tax=Henriciella... [more]
UPI000A02A4951.290e-6773.76transcriptional regulator NrdR n=1 Tax=Henriciella... [more]
A0A069E1L4_9PROT1.950e-6773.24Transcriptional repressor NrdR n=8 Tax=Hyphomonada... [more]
NRDR_HYPNA2.860e-6773.24Transcriptional repressor NrdR n=3 Tax=Hyphomonas ... [more]
A0A059ED16_9PROT1.440e-6674.29Transcriptional repressor NrdR n=2 Tax=Hyphomonas ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005144ATP-cone domainPFAMPF03477ATP-conecoord: 39..126
e-value: 1.8E-16
score: 60.5
IPR005144ATP-cone domainPROSITEPS51161ATP_CONEcoord: 39..129
score: 22.300917
IPR003796Ribonucleotide reductase regulator NrdR-likeTIGRFAMTIGR00244TIGR00244coord: 2..136
e-value: 1.0E-42
score: 143.6
IPR003796Ribonucleotide reductase regulator NrdR-likePANTHERPTHR30455TRANSCRIPTIONAL REPRESSOR NRDRcoord: 1..137
IPR003796Ribonucleotide reductase regulator NrdR-likeHAMAPMF_00440NrdRcoord: 1..142
score: 72.670868

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10428contigC-australica_Contig_10428:3..431 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10428.1.1mRNA_C-australica_Contig_10428.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10428 3..820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10428.1.1 ID=prot_C-australica_Contig_10428.1.1|Name=mRNA_C-australica_Contig_10428.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=143bp
TAVKDSRPAEDNNAVRRRRGCDNCGARFTTFERVQLREITVLKRDGKRSV
FDRDKLVRSVSIALRKRPVSVEQIDQIVSGMVRKLESSGESEMSSADIGQ
MVMESLRGVDPVGYVRYASVYKDFRDPSDFAHFIEQTALEDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005144ATP-cone_dom
IPR003796RNR_NrdR-like