prot_C-australica_Contig_1038.7.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1038.7.1
Unique Nameprot_C-australica_Contig_1038.7.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length84
Homology
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: D7FW88_ECTSI (40S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW88_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 8.320e-31
Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 0
Query:    8 SSQDLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKADD 79
            S+ DLY+PRKCSWTNRLL A DH+S Q+NVG +DPVSGTFTG+SDVYALAG++R  GEADEAL  LVNK D+
Sbjct:    7 SNVDLYIPRKCSWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDE 78          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: A0A7S0FIC7_9STRA (40S ribosomal protein S21 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIC7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 8.170e-25
Identity = 47/69 (68.12%), Postives = 57/69 (82.61%), Query Frame = 0
Query:   11 DLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKADD 79
            DLY+PRKCSWTNRLL +GDH SVQ+NVGNVDPV+G FTG+S  +A++G+VR   EAD AL AL  KA+D
Sbjct:   10 DLYVPRKCSWTNRLLTSGDHGSVQINVGNVDPVTGLFTGESTPFAISGYVRAKSEADMALTALA-KAND 77          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: A0A835Z072_9STRA (40S ribosomal protein S21 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z072_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.230e-24
Identity = 43/68 (63.24%), Postives = 56/68 (82.35%), Query Frame = 0
Query:   11 DLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKAD 78
            DLY+PRKCSWTNRLL+A DHASVQ+NV  +DP +G  TG  +V+ALAGF+RR+G++D AL AL ++ D
Sbjct:   10 DLYVPRKCSWTNRLLVAKDHASVQINVAKIDPQTGVATGAHEVFALAGFLRRLGQSDNALAALSSQKD 77          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: B8BZU9_THAPS (40S ribosomal protein S21 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZU9_THAPS)

HSP 1 Score: 93.2 bits (230), Expect = 3.760e-23
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
Query:   11 DLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKADDR 80
            DLY+PRKCSWTNRL+ A DH SVQ+NV NVDPV+G FTG+S  YA+AG++R   E D A  ALV   D +
Sbjct:   10 DLYIPRKCSWTNRLIRAKDHGSVQINVANVDPVTGLFTGESTAYAMAGYIRDKSEGDMAFTALVEANDKK 79          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: A0A812Q5U2_9DINO (40S ribosomal protein S21 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q5U2_9DINO)

HSP 1 Score: 92.8 bits (229), Expect = 4.650e-23
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   11 DLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKAD 78
            DLY+PRKCSWTNRL+ A DHASVQ+NV ++DP +G + G    YAL GF+R  GEAD AL  LV KAD
Sbjct:   10 DLYIPRKCSWTNRLIAAKDHASVQINVADIDPTTGKYEGDYQTYALCGFIRAKGEADLALTELVAKAD 77          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: G4ZUD9_PHYSP (40S ribosomal protein S21 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZUD9_PHYSP)

HSP 1 Score: 90.9 bits (224), Expect = 2.690e-22
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    9 SQDLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKAD 78
            S D+Y+PRKCSWTNR+L A DHASVQ+NVG V+  +G FTG+SD YALAG++R  GE D+A+  L  + D
Sbjct:    8 SIDIYIPRKCSWTNRILAAKDHASVQINVGRVN-ANGVFTGESDTYALAGYIRHHGEGDQAITELARQTD 76          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: A0A8J2SUB2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUB2_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.170e-21
Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 0
Query:   11 DLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKADD 79
            DLY+PRKCSWTNRL+ A D ASVQ+NVG +DP +G  TG S+ YAL+G+VR  GE+D AL  LV K D+
Sbjct:  118 DLYIPRKCSWTNRLIGASDQASVQINVGTIDPNTGLHTGGSETYALSGYVRNKGESDMALTELVRKQDE 186          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: A0A5A8C067_CAFRO (40S ribosomal protein S21 n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C067_CAFRO)

HSP 1 Score: 89.4 bits (220), Expect = 1.220e-21
Identity = 40/68 (58.82%), Postives = 53/68 (77.94%), Query Frame = 0
Query:   11 DLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKAD 78
            DLY+PRKCSWTNRL+ A DHA+VQ+NVG+VD  +G + G    +AL G+VR+ GEAD+AL  L+ +AD
Sbjct:   10 DLYIPRKCSWTNRLITAKDHAAVQINVGDVDAATGRYAGTFRTFALCGYVRQKGEADQALNTLIARAD 77          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: A0A024TLB5_9STRA (40S ribosomal protein S21 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLB5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.550e-21
Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 0
Query:   11 DLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKADDR 80
            D+Y+PRKCSWTNR+L A DHASVQ+ V  VD  +G +TG++DVYAL+G++R  GE D AL  LV KA+++
Sbjct:   10 DIYIPRKCSWTNRILSAKDHASVQIAVAKVD-ANGVYTGQNDVYALSGYIRAKGEGDHALTDLVRKAEEK 78          
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Match: K3WSU9_GLOUD (40S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU9_GLOUD)

HSP 1 Score: 89.0 bits (219), Expect = 1.550e-21
Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 0
Query:    9 SQDLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGKSDVYALAGFVRRMGEADEALLALVNKAD 78
            S D+Y+PRKCSWTNR+L A DHASVQ+NV  V+  +G FTG+SD +ALAG++R  GEAD AL  L  +AD
Sbjct:    8 SIDIYIPRKCSWTNRILAAKDHASVQINVARVN-ANGVFTGESDTFALAGYIRSKGEADLALTELARQAD 76          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1038.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW88_ECTSI8.320e-3173.6140S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID... [more]
A0A7S0FIC7_9STRA8.170e-2568.1240S ribosomal protein S21 n=1 Tax=Minutocellus pol... [more]
A0A835Z072_9STRA3.230e-2463.2440S ribosomal protein S21 n=1 Tax=Tribonema minus ... [more]
B8BZU9_THAPS3.760e-2361.4340S ribosomal protein S21 n=1 Tax=Thalassiosira ps... [more]
A0A812Q5U2_9DINO4.650e-2363.2440S ribosomal protein S21 n=1 Tax=Symbiodinium sp.... [more]
G4ZUD9_PHYSP2.690e-2260.0040S ribosomal protein S21 n=7 Tax=Peronosporaceae ... [more]
A0A8J2SUB2_9STRA1.170e-2162.32Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5A8C067_CAFRO1.220e-2158.8240S ribosomal protein S21 n=1 Tax=Cafeteria roenbe... [more]
A0A024TLB5_9STRA1.550e-2158.5740S ribosomal protein S21 n=3 Tax=Aphanomyces TaxI... [more]
K3WSU9_GLOUD1.550e-2161.4340S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 11..77
e-value: 8.0E-28
score: 96.5
IPR001931Ribosomal protein S21ePIRSFPIRSF002148RPS21ecoord: 7..81
e-value: 3.5E-26
score: 89.1
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 10..76
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 7..79
e-value: 2.4E-27
score: 96.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1038contigC-australica_Contig_1038:15329..16418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1038.7.1mRNA_C-australica_Contig_1038.7.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1038 15329..16418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1038.7.1 ID=prot_C-australica_Contig_1038.7.1|Name=mRNA_C-australica_Contig_1038.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=84bp
MIPIPSPSSQDLYLPRKCSWTNRLLIAGDHASVQLNVGNVDPVSGTFTGK
SDVYALAGFVRRMGEADEALLALVNKADDRGNM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001931Ribosomal_S21e
IPR038579Ribosomal_S21e_sf