prot_C-australica_Contig_10368.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10368.1.1
Unique Nameprot_C-australica_Contig_10368.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length268
Homology
[Close]
BLAST of mRNA_C-australica_Contig_10368.1.1 vs. uniprot
Match: A0A3B0UC25_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0UC25_9ZZZZ)

HSP 1 Score: 168 bits (425), Expect = 1.060e-45
Identity = 161/267 (60.30%), Postives = 192/267 (71.91%), Query Frame = 0 
Query:    1 GGNGQVGKTVTEKDKTEGREYTPELHGFQLSGLINYVGYNTIGSQITLGLNSTKNYLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAVNHTGEIGNPKGPAEGTGTAMQLGLVNICGNMGGLXXXXXXXXXXXXXXXXXXXXFFKNEKVGNFSDGPAYGLLNFGYYLNPRVYMSDLFLSNFSINTGKPLNLRVSAAKRHVYSYNEVVYSKNYGTDHGMNWGLSYRAGIISYYKDIVPENRKN 267
            GGN  VG T  EK K     Y   L GFQL+G++NY G NT G+QIT+G+N+T+ YL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       + A NH G I   KGP   T TAMQ+G++N  G+MGG XXXXXXXXXXXXXXXXXXXX FK  K  ++   PA+GLLN G  +NPR Y+S+L+L+N+ + TGK LN +V +A R VYSYNE++YS NY  +  + WG SYR GIIS+ K   P   +N
Sbjct:   92 GGNEMVGLTEKEKRKQIRNGYETNLTGFQLAGVLNYTGANTEGAQITVGVNNTQKYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSATGMQIGAYNHAGVINPTKGPNPSTNTAMQIGIINTTGDMGGWXXXXXXXXXXXXXXXXXXXXIFKMPKPVDYKASPAFGLLNIGGSMNPRFYVSELYLTNYGLFTGKGLNSKVRSASRFVYSYNEIIYSTNYKQEREIKWGASYRFGIISFTKSQDPNVWRN 358
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10368.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3B0UC25_9ZZZZ1.060e-4560.30Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10368contigC-australica_Contig_10368:20..823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10368.1.1mRNA_C-australica_Contig_10368.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10368 20..823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10368.1.1 ID=prot_C-australica_Contig_10368.1.1|Name=mRNA_C-australica_Contig_10368.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=268bp
GGNGQVGKTVTEKDKTEGREYTPELHGFQLSGLINYVGYNTIGSQITLGL
NSTKNYLLGVQISGILNSVGSFTSGAQIALGGNLTRKSMSGTQASLLFNS
SGGRHSGFQLSAVNHTGEIGNPKGPAEGTGTAMQLGLVNICGNMGGLQVG
LINIGDRVGGTQIGLINFFKNEKVGNFSDGPAYGLLNFGYYLNPRVYMSD
LFLSNFSINTGKPLNLRVSAAKRHVYSYNEVVYSKNYGTDHGMNWGLSYR
AGIISYYKDIVPENRKN*
back to top