prot_C-australica_Contig_10338.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10338.1.1
Unique Nameprot_C-australica_Contig_10338.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length267
Homology
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: A0A239FWA1_9RHOB (TRAP transporter, DctM subunit n=5 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A239FWA1_9RHOB)

HSP 1 Score: 468 bits (1203), Expect = 4.340e-163
Identity = 248/266 (93.23%), Postives = 256/266 (96.24%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKFD 266
            MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQL LQPA+D  MPW GRA AFRGAFLALLVPVG VLGIRLG+FTPTEAGAMAVLFA+IVGLIHGDL+ AHI PILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAE MLSLTS+PLLLLLIINLLLI+AGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTC+ITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWL NL+FD
Sbjct:  161 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLGLQPAFDHPMPWAGRAHAFRGAFLALLVPVGIVLGIRLGFFTPTEAGAMAVLFAIIVGLIHGDLRLAHIRPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEVMLSLTSEPLLLLLIINLLLIIAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCMITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLPNLQFD 426          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: UPI0008D25115 (TRAP transporter large permease n=1 Tax=Marinovum algicola TaxID=42444 RepID=UPI0008D25115)

HSP 1 Score: 440 bits (1131), Expect = 4.350e-152
Identity = 228/266 (85.71%), Postives = 248/266 (93.23%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKFD 266
            MGDVSIGRLFLAGIVPGV+ICAAMM AVA+RARQL+LQPAY+  +PW GR RAFRGAFLALLVPVG VLGIRLGYFTPTEAGAMAVLFAV+VGL+HGDLK +HI PILEQTMQATAVILL+ICAANAFGFYMTWERIPAQVAEAML+LT +PLLLLL+INLLL+LAGMFIEGSAALILLTPILVPVITK+G+DPVHFG+VMVFNLT+AGVTPPLGTLMFTTC ITG  I  FIRA  PFY+VLFGML VLTY+PQLSLWL NL+FD
Sbjct:  161 MGDVSIGRLFLAGIVPGVLICAAMMGAVALRARQLDLQPAYEAPLPWAGRGRAFRGAFLALLVPVGIVLGIRLGYFTPTEAGAMAVLFAVVVGLVHGDLKLSHIRPILEQTMQATAVILLIICAANAFGFYMTWERIPAQVAEAMLALTQNPLLLLLLINLLLVLAGMFIEGSAALILLTPILVPVITKVGIDPVHFGVVMVFNLTVAGVTPPLGTLMFTTCSITGVRIADFIRACAPFYLVLFGMLFVLTYLPQLSLWLPNLQFD 426          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: A0A0W7WGY6_9RHOB (C4-dicarboxylate ABC transporter n=1 Tax=Ponticoccus marisrubri TaxID=1685382 RepID=A0A0W7WGY6_9RHOB)

HSP 1 Score: 431 bits (1109), Expect = 8.350e-149
Identity = 225/266 (84.59%), Postives = 247/266 (92.86%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKFD 266
            MGDVSIGRLFLAG+VPGVVICAAMM AVA+RARQL L+PA+D  + W+ RA  FRGAFLALLVPVG V+GIRLG+FTPTEAGAMAVLFAV+VGL HG+LK AH+ PILEQTMQATAVILLVIC ANAFGFYMTWE+IPAQVA AML+LT +PL LLL+INLLLILAGMFIEGSAALILLTPILVPV+TKLGVDPVHFGIVMVFNLT+AGVTPPLGTLMFTTC +TGTPIG+FIRA+LPFY VLFGMLIVLTY+PQLSLWL NL+FD
Sbjct:  161 MGDVSIGRLFLAGVVPGVVICAAMMGAVALRARQLGLRPAFDAPLAWSARAVRFRGAFLALLVPVGIVMGIRLGFFTPTEAGAMAVLFAVLVGLAHGELKLAHLRPILEQTMQATAVILLVICTANAFGFYMTWEQIPAQVATAMLALTDNPLALLLVINLLLILAGMFIEGSAALILLTPILVPVVTKLGVDPVHFGIVMVFNLTVAGVTPPLGTLMFTTCSVTGTPIGQFIRAALPFYAVLFGMLIVLTYLPQLSLWLPNLQFD 426          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: A0A1M5QJJ2_9RHOB (TRAP transporter, DctM subunit n=1 Tax=Cognatishimia maritima TaxID=870908 RepID=A0A1M5QJJ2_9RHOB)

HSP 1 Score: 404 bits (1039), Expect = 3.550e-138
Identity = 208/266 (78.20%), Postives = 239/266 (89.85%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKFD 266
            MGDVSIG+LFLAGIVPGVVICA MMV VA  AR+L L+PA+D   PW+ R RAF  AFLAL+VPVG VLGIRLG+FTPTEAGAMAV FA IVG+++GDLK +HI PILEQTMQATAVILLVIC A+AFGFYMTWE+IP+ +A+AML+LT +P LLL++INLLL++ GMFIEGSAALILLTPILVPVITK+G+DPVHFGIVMVFNLT+AGVTPPLGTLMFTTC ITG PI KFIRA++PFYI+LFGML VLT++PQLSLWL NLKF+
Sbjct:  161 MGDVSIGQLFLAGIVPGVVICAGMMVTVAYEARRLELKPAFDAPAPWSVRGRAFASAFLALMVPVGIVLGIRLGFFTPTEAGAMAVAFAAIVGILYGDLKLSHIQPILEQTMQATAVILLVICMASAFGFYMTWEQIPSALAKAMLALTENPYLLLILINLLLVVVGMFIEGSAALILLTPILVPVITKVGIDPVHFGIVMVFNLTVAGVTPPLGTLMFTTCSITGVPISKFIRAAVPFYILLFGMLFVLTFIPQLSLWLPNLKFN 426          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: UPI001ABA662C (TRAP transporter large permease n=1 Tax=Jannaschia marina TaxID=2741674 RepID=UPI001ABA662C)

HSP 1 Score: 404 bits (1038), Expect = 4.710e-138
Identity = 209/266 (78.57%), Postives = 239/266 (89.85%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKFD 266
            MG+VSIG+LFLAGIVPG+VIC  MM  VA+RARQL+L+PA+  +M W GR RAF  AFLALLVPVG V GIR G+FTPTEAGAMAVL AV+VGLIHGDL  AHI+PILEQTMQATAVILLVICAA+AFGFYMTWERIPA VA+AML+LT +P++LLLI+NLLLILAGMFIEGSAALILLTP+LVPV+T++GVDPVHFGIVMVFNLTIAGVTPPLGTLMFT C ITG  IG+FIR+S+PFY +LF ML++LT+VPQLSLWL  L+FD
Sbjct:  159 MGNVSIGQLFLAGIVPGMVICMGMMALVAVRARQLDLRPAFPHRMTWAGRGRAFAQAFLALLVPVGIVAGIRCGFFTPTEAGAMAVLLAVLVGLIHGDLGVAHIVPILEQTMQATAVILLVICAAHAFGFYMTWERIPAMVADAMLALTRNPVVLLLIVNLLLILAGMFIEGSAALILLTPVLVPVVTEVGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTACAITGVSIGQFIRSSIPFYALLFAMLLILTFVPQLSLWLPELRFD 424          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: UPI000A97CCD2 (TRAP transporter large permease n=2 Tax=Ectothiorhodospiraceae TaxID=72276 RepID=UPI000A97CCD2)

HSP 1 Score: 397 bits (1019), Expect = 3.850e-135
Identity = 207/265 (78.11%), Postives = 236/265 (89.06%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKF 265
            MG+VSIG+LF+AGIVPGVVIC AMM  VAI+AR+ NL+ A ++ MPW  R RAF GAFLALLVPVG VLGIRLG+FTPTEAGAMAVLFA IVGLI+G+LK  H+ PILEQT+QATAVILLVICAA AFGFYMTWERIPA +A+ ML+LT++P LLL++INLLLIL GMFIEG+AALILLTPILVPVIT++G+DPVHFGIVMVFNLT+AGVTPPLGTLMFT C ITG  I +FI+A LPFYIVLFGMLIVLTY+PQLSLWL  L+F
Sbjct:  161 MGNVSIGKLFMAGIVPGVVICMAMMATVAIQARRANLEAALEKPMPWIDRGRAFTGAFLALLVPVGIVLGIRLGFFTPTEAGAMAVLFAAIVGLIYGELKFEHLRPILEQTVQATAVILLVICAAGAFGFYMTWERIPAVIAQEMLNLTANPYLLLVLINLLLILVGMFIEGTAALILLTPILVPVITEVGIDPVHFGIVMVFNLTVAGVTPPLGTLMFTACSITGVSIARFIKACLPFYIVLFGMLIVLTYIPQLSLWLPELQF 425          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: A0A3M1A1J2_9PROT (TRAP transporter large permease (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1A1J2_9PROT)

HSP 1 Score: 389 bits (1000), Expect = 1.780e-133
Identity = 204/265 (76.98%), Postives = 235/265 (88.68%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKF 265
            MGDVSIGRLF+AGI+PGV+ CAAMM AVA+++R+L L+PA +R MPW  R RA   A LAL VPVG VLGIRLGYFTPTEAGAMAVLF+++VGL + +L+ AH+ PILEQTMQATAVILLVIC A+AFGFYMTWERIPA VAEAML LT+DPL+LLL+INLLLILAGMFIEGSAALILLTPILVPV+TK+G+DPVHFGIVMVFNLT+AGVTPPLGTLMFTTC IT  PI  F+RASLPFY VLF ML++L++VP LSLWL +L+F
Sbjct:   78 MGDVSIGRLFMAGILPGVLTCAAMMGAVAVQSRRLGLKPALERPMPWRLRGRALLEALLALTVPVGIVLGIRLGYFTPTEAGAMAVLFSILVGLAYRELRLAHVRPILEQTMQATAVILLVICMASAFGFYMTWERIPATVAEAMLDLTADPLVLLLLINLLLILAGMFIEGSAALILLTPILVPVVTKVGIDPVHFGIVMVFNLTVAGVTPPLGTLMFTTCAITRVPIADFVRASLPFYAVLFAMLMLLSFVPGLSLWLPHLEF 342          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: UPI000DF13235 (TRAP transporter large permease n=1 Tax=Notoacmeibacter marinus TaxID=1876515 RepID=UPI000DF13235)

HSP 1 Score: 365 bits (938), Expect = 7.150e-123
Identity = 190/265 (71.70%), Postives = 225/265 (84.91%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKF 265
            MGDVSIGRLFLAGIVPG+V+C AMM  V + +R+  ++P+ +R   W  R  + + A LALLVP+G V+GIR G+FTPTEAGAMAV FAVI+GLI  +LK  H+ PILEQT QATAV+LLVIC ANAFGFYMTWERIPA VA+ ML LT+DP+ LLL+INL+L+L GMF+EGSAALILLTPIL+PV++ LG+DPVHFGIVMV NLTIAGVTPPLGTLMFTTC ITG PIG+FIRA+LPFY VLF ML+++T+VPQLSLWL NLKF
Sbjct:  161 MGDVSIGRLFLAGIVPGIVLCMAMMSLVMVLSRRGGMKPSLERPASWQERWSSLKTAGLALLVPIGIVVGIRFGFFTPTEAGAMAVAFAVIIGLILRELKWRHVRPILEQTSQATAVVLLVICMANAFGFYMTWERIPAAVADWMLKLTADPVFLLLLINLMLVLVGMFLEGSAALILLTPILIPVVSALGIDPVHFGIVMVLNLTIAGVTPPLGTLMFTTCAITGVPIGRFIRAALPFYGVLFAMLLLVTFVPQLSLWLPNLKF 425          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: A0A0M9GMC6_9HYPH (C4-dicarboxylate ABC transporter n=1 Tax=Ahrensia marina TaxID=1514904 RepID=A0A0M9GMC6_9HYPH)

HSP 1 Score: 361 bits (926), Expect = 5.020e-121
Identity = 182/266 (68.42%), Postives = 225/266 (84.59%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKFD 266
            M DVSIGRLFLAGIVPG+V+C +MM  VA  A++LNL+PA D +  W  R  AFRGA LAL+VPVG V GIR G+FTPTEAGAMAV+F++ VG+++G+LK  H  PI+EQT+QATA++LLVIC A+ FGF+MTWERIP  VAEAML+LT +P LLLL+IN+LLI+ GMFIEGSA+LILLTPILVPVI  +G+DPVHFGIVMV NLTIAG+TPPLGT+MFTTC +TG  IG F+RA+LPFY +LF ML++LT++P +SLWL NL+F+
Sbjct:  162 MSDVSIGRLFLAGIVPGIVLCVSMMALVAFMAKRLNLKPALDVKTTWGQRLVAFRGASLALMVPVGIVGGIRFGFFTPTEAGAMAVVFSIFVGILYGELKPHHFKPIMEQTIQATAIVLLVICMASTFGFFMTWERIPVIVAEAMLALTENPFLLLLMINVLLIIVGMFIEGSASLILLTPILVPVIASVGIDPVHFGIVMVLNLTIAGITPPLGTIMFTTCAVTGISIGAFVRAALPFYALLFTMLLILTFIPAISLWLPNLQFN 427          
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Match: UPI00067B8D03 (TRAP transporter large permease n=1 Tax=Pseudorhodobacter wandonensis TaxID=1120568 RepID=UPI00067B8D03)

HSP 1 Score: 360 bits (924), Expect = 9.770e-121
Identity = 184/266 (69.17%), Postives = 223/266 (83.83%), Query Frame = 0
Query:    1 MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGRARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLKAAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTSDPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIVMVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVLTYVPQLSLWLSNLKFD 266
            MG+VSIGRLFLAGIVPG ++C AMM+ VA+ A++  L+PA+D  MPW  R    R A LA+ VP G V GIR G+FTPTEAGAMAVLFAVIVGL++ +LK +H++PILEQT QATA+ILLVICAA AFGFYMTWERIP  +A AML+LT +P+LLLLIINLLLI+ GMFIEG+AA+ILL PILVPVI  + +DPVHFGI+MV NLTIAGVTPPLGTLMFTTC ITG  IG F+RASLPFY +LFGML++++Y+P+LSLWL + + +
Sbjct:  161 MGNVSIGRLFLAGIVPGALLCIAMMLLVALLAKRHGLRPAFDAPMPWPQRLATLRAACLAMTVPFGIVFGIRFGWFTPTEAGAMAVLFAVIVGLLYRELKWSHVVPILEQTAQATAIILLVICAAQAFGFYMTWERIPETIARAMLALTENPILLLLIINLLLIIVGMFIEGTAAIILLAPILVPVIASVNIDPVHFGIIMVLNLTIAGVTPPLGTLMFTTCAITGVSIGAFVRASLPFYALLFGMLMLISYLPELSLWLPDFRMN 426          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10338.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A239FWA1_9RHOB4.340e-16393.23TRAP transporter, DctM subunit n=5 Tax=Roseobacter... [more]
UPI0008D251154.350e-15285.71TRAP transporter large permease n=1 Tax=Marinovum ... [more]
A0A0W7WGY6_9RHOB8.350e-14984.59C4-dicarboxylate ABC transporter n=1 Tax=Ponticocc... [more]
A0A1M5QJJ2_9RHOB3.550e-13878.20TRAP transporter, DctM subunit n=1 Tax=Cognatishim... [more]
UPI001ABA662C4.710e-13878.57TRAP transporter large permease n=1 Tax=Jannaschia... [more]
UPI000A97CCD23.850e-13578.11TRAP transporter large permease n=2 Tax=Ectothiorh... [more]
A0A3M1A1J2_9PROT1.780e-13376.98TRAP transporter large permease (Fragment) n=1 Tax... [more]
UPI000DF132357.150e-12371.70TRAP transporter large permease n=1 Tax=Notoacmeib... [more]
A0A0M9GMC6_9HYPH5.020e-12168.42C4-dicarboxylate ABC transporter n=1 Tax=Ahrensia ... [more]
UPI00067B8D039.770e-12169.17TRAP transporter large permease n=1 Tax=Pseudorhod... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010656TRAP C4-dicarboxylate transport system permease DctM subunitPFAMPF06808DctMcoord: 3..256
e-value: 1.2E-59
score: 202.3
IPR004681TRAP transporter large membrane protein DctMPANTHERPTHR33362SIALIC ACID TRAP TRANSPORTER PERMEASE PROTEIN SIAT-RELATEDcoord: 2..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10338contigC-australica_Contig_10338:4..804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10338.1.1mRNA_C-australica_Contig_10338.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10338 4..825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10338.1.1 ID=prot_C-australica_Contig_10338.1.1|Name=mRNA_C-australica_Contig_10338.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=267bp
MGDVSIGRLFLAGIVPGVVICAAMMVAVAIRARQLNLQPAYDRQMPWTGR
ARAFRGAFLALLVPVGTVLGIRLGYFTPTEAGAMAVLFAVIVGLIHGDLK
AAHILPILEQTMQATAVILLVICAANAFGFYMTWERIPAQVAEAMLSLTS
DPLLLLLIINLLLILAGMFIEGSAALILLTPILVPVITKLGVDPVHFGIV
MVFNLTIAGVTPPLGTLMFTTCLITGTPIGKFIRASLPFYIVLFGMLIVL
TYVPQLSLWLSNLKFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010656DctM
IPR004681TRAP_DctM