prot_C-australica_Contig_1014.5.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1014.5.1
Unique Nameprot_C-australica_Contig_1014.5.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length257
Homology
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BLAST of mRNA_C-australica_Contig_1014.5.1 vs. uniprot
Match: D7FRA9_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA9_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 9.480e-34
Identity = 87/236 (36.86%), Postives = 118/236 (50.00%), Query Frame = 0 
Query:   21 RRRSSILAGPLLTSLKEIVEDSFQEQLHFDHLCLGGGIAAARWCSHISKAETNSTAAVITAYPQGMFPYSRDAFIRDVVMSSPPHCSGPPPDWYQDQGVTVLHSCQAVRADLDGAFLAVNRVAHDGKGNIVYESSIKISYGKLVIATGACPRSFPAPVPTHNPEDDWATAKLMQAACFLTRHPDLSTGNVGTDGAASLELRTPKEYGFGSVHYIRDAGDAVKLAAAASRTEEDGQE 256
            RRRSS LA  +L +++E  E+ F+E L +D + LGGG+AA  W    S  E +                                     P+WY+  G+T+L  CQAV  DLD  FL V RV     G +V+  +IK+ YG+L+IATGA PR     + + +       +K +Q +C  TRHPD+       DG+  L    P  +GFGSVHY+RD GD VKL  A  R E DGQ+
Sbjct:    6 RRRSSALAAQVLEAIRETDEEIFEEILQYDLVALGGGVAAGYW-GEGSGGEAHD------------------------------------PEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASN-GELVFGDTIKVVYGRLLIATGARPRKIADEIKSLD-----NISKGLQGSCCCTRHPDV-------DGSP-LACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQD 190
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BLAST of mRNA_C-australica_Contig_1014.5.1 vs. uniprot
Match: A0A7S4A4F3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F3_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.830e-7
Identity = 63/241 (26.14%), Postives = 93/241 (38.59%), Query Frame = 0 
Query:   52 LCLGGGIAAARWCSHISKA---------ETNST-AAVITAYPQGMFPYSRDAFIRDVVMSSPPHCSGPPPDWYQDQGVTVLHSCQAVRADLDGAFLAVNRVAHDGKGNIVYESSIKISYGKLVIATGACPRSFPAPVPTHNPEDDWATAKLMQAACFL--TRHPDLSTGNVGTDGAASLE------------------------LRTPKEYGFGSVHYIRDAGDAVKLAAAASRTEEDGQE 256
            L +GGG+AAA    H+++A         ET+     +++AYP G+ PY R    +D +  +    +  P     D GV +       + D D   +         +  I YE        KL+IATGA                    AK++    +L   +H D+       +G   +                         L+  K  GFGSVHY+RD GDA K++ A S  E DGQE
Sbjct:    8 LVVGGGVAAA----HVAQALCERAEELPETDKALCTILSAYPAGISPYDRSRISKDALDCTRLDATSFPSLELPD-GVALWSGKVVTKCDPDAKKVTYRDAITGDEDEITYE--------KLIIATGA-------------------RAKVLDDQPYLWQDKHSDVVDNGSIEEGGEDIACAPAXXXXXXXXXXXPAPRIRPWCLQADKNCGFGSVHYLRDIGDAAKVSEAVSMKEADGQE 216
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1014.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRA9_ECTSI9.480e-3436.86Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A7S4A4F3_9STRA1.830e-726.14Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 173..182
e-value: 3.6E-11
score: 44.6
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 54..172
e-value: 3.6E-11
score: 44.6
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 46..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1014contigC-australica_Contig_1014:7135..8466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1014.5.1mRNA_C-australica_Contig_1014.5.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1014 6976..8466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1014.5.1 ID=prot_C-australica_Contig_1014.5.1|Name=mRNA_C-australica_Contig_1014.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=257bp
MGEMANLHYPEDLPVGQRTVRRRSSILAGPLLTSLKEIVEDSFQEQLHFD
HLCLGGGIAAARWCSHISKAETNSTAAVITAYPQGMFPYSRDAFIRDVVM
SSPPHCSGPPPDWYQDQGVTVLHSCQAVRADLDGAFLAVNRVAHDGKGNI
VYESSIKISYGKLVIATGACPRSFPAPVPTHNPEDDWATAKLMQAACFLT
RHPDLSTGNVGTDGAASLELRTPKEYGFGSVHYIRDAGDAVKLAAAASRT
EEDGQEP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf