prot_C-australica_Contig_10123.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10123.1.1
Unique Nameprot_C-australica_Contig_10123.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length216
Homology
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: A0A0B3S1U0_9RHOB (Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein n=15 Tax=Rhodobacterales TaxID=204455 RepID=A0A0B3S1U0_9RHOB)

HSP 1 Score: 370 bits (949), Expect = 9.720e-123
Identity = 201/216 (93.06%), Postives = 212/216 (98.15%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M  FLKLLARNRLALAGGIVL  VVLLAL+TPLLPLAEPNVTNT+ARFQ+PF++GALLGTDHLGRDLLSRL+WGTRLSLAVGFAAA+VAATLGAAIGI+AG+YGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNT+IILTEILPNV+PVIVIAMSTTIGWMILETAGLSF
Sbjct:    1 MMAFLKLLARNRLALAGGIVLSFVVLLALITPLLPLAEPNVTNTAARFQKPFTEGALLGTDHLGRDLLSRLMWGTRLSLAVGFAAAVVAATLGAAIGIVAGFYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTRIILTEILPNVIPVIVIAMSTTIGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: UPI001CCA2468 (dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein n=1 Tax=Celeribacter litoreus TaxID=2876714 RepID=UPI001CCA2468)

HSP 1 Score: 358 bits (920), Expect = 2.250e-118
Identity = 195/216 (90.28%), Postives = 210/216 (97.22%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M  FLKLLARNRLALAGG+VL +VVLLA++TPLLPLA+PNVTNT+ARF +PFS+GALLGTDHLGRDLLSRL+WGTRLSLAVGFAAA+VAATLGAAIGIIAGYYGGRTDNLIMRGVD+LMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAA+LAGL++ +IIL EILPNVVPVIVIAMSTTIGWMILETAGLSF
Sbjct:    1 MSAFLKLLARNRLALAGGVVLSVVVLLAIITPLLPLADPNVTNTAARFTKPFSEGALLGTDHLGRDLLSRLMWGTRLSLAVGFAAAVVAATLGAAIGIIAGYYGGRTDNLIMRGVDLLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAAKLAGLTHRQIILKEILPNVVPVIVIAMSTTIGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: A0A2S8S3B1_9RHOB (Peptide/nickel transport system permease protein n=1 Tax=Defluviimonas denitrificans TaxID=404881 RepID=A0A2S8S3B1_9RHOB)

HSP 1 Score: 357 bits (916), Expect = 9.000e-118
Identity = 193/216 (89.35%), Postives = 211/216 (97.69%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M GF +LLARNRLALAGG+VL LV+LLALVTPLLPLA+P+VT+T+ RF+ PFS+GALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAAT+G+AIGI+AG+YGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNT+II++E+LPNV+PVIVIAMSTTIGWMILETAGLSF
Sbjct:    1 MTGFFQLLARNRLALAGGVVLSLVILLALVTPLLPLADPDVTDTANRFKLPFSEGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATIGSAIGIVAGFYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTRIIVSEVLPNVIPVIVIAMSTTIGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: A0A7Y7DC09_9RHOB (Dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A7Y7DC09_9RHOB)

HSP 1 Score: 355 bits (911), Expect = 4.810e-117
Identity = 195/216 (90.28%), Postives = 208/216 (96.30%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M  FL LLARNRLALAGGIVLLLVVLLAL+TP+LPLA+P+VTNTS RFQ  FSDGA+LGTDHLGRDLLSRL+WGTRLSLAVGFAAAIVAAT+GA IGI+AGYYGGR DN+IMRGVDMLMAFPYILLALAIVAALGPGLFNALIAV+AVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNT+IIL+EILPNV+PVIVIAMSTTIGWMILETAGLSF
Sbjct:    1 MTSFLTLLARNRLALAGGIVLLLVVLLALLTPVLPLADPDVTNTSNRFQPIFSDGAVLGTDHLGRDLLSRLMWGTRLSLAVGFAAAIVAATIGAGIGIVAGYYGGRIDNIIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVSAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTRIILSEILPNVIPVIVIAMSTTIGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: UPI0008BFC07F (dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein n=1 Tax=Marinovum algicola TaxID=42444 RepID=UPI0008BFC07F)

HSP 1 Score: 355 bits (911), Expect = 5.080e-117
Identity = 200/216 (92.59%), Postives = 207/216 (95.83%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M GFL LLARNRLALAGGIVLLLV LLALVTPLLPLA+P+VTNTS RF+  FS  ALLGTDHLGRDLLSRL+WGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDN+IMRGVDMLMAFPYILLALAIVAALGPGL NALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNT+IIL+EILPNVVPVIVIAMSTTIGWMILETAGLSF
Sbjct:    1 MTGFLTLLARNRLALAGGIVLLLVGLLALVTPLLPLADPDVTNTSNRFRPIFSPDALLGTDHLGRDLLSRLMWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNVIMRGVDMLMAFPYILLALAIVAALGPGLLNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTRIILSEILPNVVPVIVIAMSTTIGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: UPI001AEA082C (dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein n=1 Tax=unclassified Ruegeria TaxID=2625375 RepID=UPI001AEA082C)

HSP 1 Score: 348 bits (894), Expect = 1.830e-114
Identity = 189/216 (87.50%), Postives = 208/216 (96.30%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M+ FL LLARNRLAL G +V+ LVVLLALVTPLLPLA+P+VT+T+ RF+RPFS+GALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAI+AATLGAAIGIIAGYYGGRTDN+IMRGVDMLMAFPYILLALAIVAALGPGL NALIAVAAVN+PFFARNIRGITVGIAHKEFVDAARL+G+++ +IILTE+LPNV+PVIVIAMSTTIGWMILETAGLSF
Sbjct:    1 MKNFLMLLARNRLALGGLVVMGLVVLLALVTPLLPLADPDVTDTANRFKRPFSEGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIIAATLGAAIGIIAGYYGGRTDNIIMRGVDMLMAFPYILLALAIVAALGPGLMNALIAVAAVNIPFFARNIRGITVGIAHKEFVDAARLSGMTDARIILTEVLPNVIPVIVIAMSTTIGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: A0A6L5Z437_9RHOB (ABC transporter permease subunit n=2 Tax=Halovulum marinum TaxID=2662447 RepID=A0A6L5Z437_9RHOB)

HSP 1 Score: 348 bits (894), Expect = 1.880e-114
Identity = 187/216 (86.57%), Postives = 206/216 (95.37%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M  FLKLLARNRLAL GGI+LLLVV LALVTPLLPLA+P+VT T+ RF+RPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAA+VAA  GAAIG++AG++GGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVN+PFFARNIRG+TVGIAH+EFVDAARL+G+S  +IILTEI+PNV+PVIVIAMSTT+GWMILETAGLSF
Sbjct:    1 MSAFLKLLARNRLALVGGIILLLVVALALVTPLLPLADPDVTRTADRFKRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAALVAAVGGAAIGVVAGFFGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNIPFFARNIRGVTVGIAHREFVDAARLSGMSTARIILTEIVPNVIPVIVIAMSTTVGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: A0A520ZPE3_9RHOB (ABC transporter permease (Fragment) n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A520ZPE3_9RHOB)

HSP 1 Score: 335 bits (858), Expect = 5.270e-113
Identity = 188/216 (87.04%), Postives = 196/216 (90.74%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M  F  LLARNRLALAGGIVLL VVLLALVTPLLPLA P+VTNTS RFQ P S+ ALLGTDHLGRDLLSRL+WGTRLSLAVGFAAAIV          +AGYYGGRTDN+IMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIA+KEFVDAARLAGLSNT+IIL+EILPNVVPVIVIAMSTTIGWMILETAGLSF
Sbjct:    1 MTAFFTLLARNRLALAGGIVLLFVVLLALVTPLLPLANPDVTNTSNRFQPPLSESALLGTDHLGRDLLSRLMWGTRLSLAVGFAAAIVXXXXXXXXXXVAGYYGGRTDNIIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIANKEFVDAARLAGLSNTRIILSEILPNVVPVIVIAMSTTIGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: UPI001CD299C7 (dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein n=1 Tax=Seohaeicola saemankumensis TaxID=481181 RepID=UPI001CD299C7)

HSP 1 Score: 344 bits (883), Expect = 8.000e-113
Identity = 184/216 (85.19%), Postives = 201/216 (93.06%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M GFL LLARNRLALAG +V++ VVLLALVTPLLPLA P+ TNT+ RFQRPF   ALLGTDHLGRDLLSRLLWGTRLSLAVGF AA+ AATLGA IGIIAGYYGGRTDN+IMRGVDMLMAFPYILLALAIVAALGPGL NALIAVAAVN+PFFARNIRG+TVGIAHKEFVDAARL+GLSN +II++E+LPNV+PV+V+AMSTTIGWMILETAGLSF
Sbjct:    1 MSGFLSLLARNRLALAGAVVIVTVVLLALVTPLLPLANPDATNTAIRFQRPFQGEALLGTDHLGRDLLSRLLWGTRLSLAVGFTAAVAAATLGATIGIIAGYYGGRTDNIIMRGVDMLMAFPYILLALAIVAALGPGLMNALIAVAAVNIPFFARNIRGVTVGIAHKEFVDAARLSGLSNARIIVSEVLPNVIPVVVVAMSTTIGWMILETAGLSF 216          
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Match: A0A254R5M3_9RHOB (Peptide ABC transporter permease n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A254R5M3_9RHOB)

HSP 1 Score: 343 bits (879), Expect = 3.280e-112
Identity = 186/216 (86.11%), Postives = 202/216 (93.52%), Query Frame = 0
Query:    1 MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQRPFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIAGYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNVPFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAMSTTIGWMILETAGLSF 216
            M+ F +LL RNRLA AGG+ L +VVLLAL+TP+LPL EPNVTNT+ RF +PFS+G LLGTDHLGRD+LSRLLWGTRLSLAVGFAAAI AA  GAAIGI+AGY+GGRTDN+IMRGVDMLMAFPYILLALAIVAALGPGL NALIAVAAVNVPFFARNIRG+TVGIAHKEFVDAARLAGLSNT+IILTEILPNV+PVIVIAMSTTIGWMILETAGLSF
Sbjct:    1 MKKFFQLLIRNRLAAAGGVALSIVVLLALLTPILPLQEPNVTNTANRFVKPFSEGHLLGTDHLGRDMLSRLLWGTRLSLAVGFAAAIFAAFFGAAIGIVAGYFGGRTDNIIMRGVDMLMAFPYILLALAIVAALGPGLVNALIAVAAVNVPFFARNIRGVTVGIAHKEFVDAARLAGLSNTRIILTEILPNVIPVIVIAMSTTIGWMILETAGLSF 216          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10123.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0B3S1U0_9RHOB9.720e-12393.06Peptide/opine/nickel uptake family ABC transporter... [more]
UPI001CCA24682.250e-11890.28dipeptide/oligopeptide/nickel ABC transporter perm... [more]
A0A2S8S3B1_9RHOB9.000e-11889.35Peptide/nickel transport system permease protein n... [more]
A0A7Y7DC09_9RHOB4.810e-11790.28Dipeptide/oligopeptide/nickel ABC transporter perm... [more]
UPI0008BFC07F5.080e-11792.59dipeptide/oligopeptide/nickel ABC transporter perm... [more]
UPI001AEA082C1.830e-11487.50dipeptide/oligopeptide/nickel ABC transporter perm... [more]
A0A6L5Z437_9RHOB1.880e-11486.57ABC transporter permease subunit n=2 Tax=Halovulum... [more]
A0A520ZPE3_9RHOB5.270e-11387.04ABC transporter permease (Fragment) n=1 Tax=Rhodob... [more]
UPI001CD299C78.000e-11385.19dipeptide/oligopeptide/nickel ABC transporter perm... [more]
A0A254R5M3_9RHOB3.280e-11286.11Peptide ABC transporter permease n=2 Tax=Rhodobact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025966Oligopeptide transport permease C-like, N-terminal domainPFAMPF12911OppC_Ncoord: 7..35
e-value: 2.5E-5
score: 24.1
IPR000515ABC transporter type 1, transmembrane domain MetI-likePFAMPF00528BPD_transp_1coord: 93..216
e-value: 4.7E-18
score: 65.6
IPR000515ABC transporter type 1, transmembrane domain MetI-likePROSITEPS50928ABC_TM1coord: 75..216
score: 21.753181
IPR000515ABC transporter type 1, transmembrane domain MetI-likeCDDcd06261TM_PBP2coord: 76..216
e-value: 2.25634E-12
score: 61.1404
IPR035906MetI-like superfamilyGENE3D1.10.3720.10coord: 65..216
e-value: 1.8E-18
score: 68.8
IPR035906MetI-like superfamilySUPERFAMILY161098MetI-likecoord: 70..216
NoneNo IPR availablePANTHERPTHR43386OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPCcoord: 8..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10123contigC-australica_Contig_10123:189..836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10123.1.1mRNA_C-australica_Contig_10123.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10123 189..836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10123.1.1 ID=prot_C-australica_Contig_10123.1.1|Name=mRNA_C-australica_Contig_10123.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=216bp
MRGFLKLLARNRLALAGGIVLLLVVLLALVTPLLPLAEPNVTNTSARFQR
PFSDGALLGTDHLGRDLLSRLLWGTRLSLAVGFAAAIVAATLGAAIGIIA
GYYGGRTDNLIMRGVDMLMAFPYILLALAIVAALGPGLFNALIAVAAVNV
PFFARNIRGITVGIAHKEFVDAARLAGLSNTKIILTEILPNVVPVIVIAM
STTIGWMILETAGLSF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025966OppC_N
IPR000515MetI-like
IPR035906MetI-like_sf