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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR003690 | Transcription termination factor, mitochondrial/chloroplastic | SMART | SM00733 | mt_12 | coord: 187..219
e-value: 510.0
score: 6.1
coord: 224..256
e-value: 1.9E-5
score: 34.1
coord: 649..681
e-value: 0.047
score: 22.8
coord: 465..496
e-value: 2400.0
score: 1.0
coord: 334..365
e-value: 0.026
score: 23.7
coord: 612..644
e-value: 0.001
score: 28.4
coord: 370..402
e-value: 0.67
score: 19.0
coord: 502..534
e-value: 0.0047
score: 26.2
coord: 114..145
e-value: 380.0
score: 7.2
coord: 297..329
e-value: 1.3E-4
score: 31.4
coord: 539..571
e-value: 3.1E-4
score: 30.1
coord: 261..292
e-value: 0.44
score: 19.6
coord: 150..182
e-value: 2.1
score: 17.3
coord: 576..607
e-value: 1.1E-5
score: 34.9
coord: 686..717
e-value: 0.4
score: 19.7 |
| IPR003690 | Transcription termination factor, mitochondrial/chloroplastic | PFAM | PF02536 | mTERF | coord: 646..717
e-value: 4.1E-10
score: 39.1
coord: 442..648
e-value: 4.7E-33
score: 114.5
coord: 144..408
e-value: 1.4E-37
score: 129.3 |
| IPR003690 | Transcription termination factor, mitochondrial/chloroplastic | PANTHER | PTHR13068 | CGI-12 PROTEIN-RELATED | coord: 253..419
coord: 501..736
coord: 103..280
coord: 444..564 |
| IPR038538 | MTERF superfamily, mitochondrial/chloroplastic | GENE3D | 1.25.70.10 | Transcription termination factor 3, mitochondrial | coord: 514..742
e-value: 1.0E-44
score: 154.7
coord: 35..207
e-value: 5.3E-18
score: 67.1
coord: 273..423
e-value: 3.3E-32
score: 113.6 |
| None | No IPR available | PANTHER | PTHR13068:SF151 | TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC | coord: 253..419
coord: 501..736
coord: 103..280
coord: 444..564 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-australica_Contig_10.23.2 ID=prot_C-australica_Contig_10.23.2|Name=mRNA_C-australica_Contig_10.23.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=774bp
MRLSLKIRLLGTGVAFCLGAEAFSIGCARFSHLGQAQAATLTLTTCAAIS
EASASIHHDVLIKCMGSLGASEKAINSISSRFPQYDIAAQDLERSFPLLL
AELHGIGLKSQDVTDMLVAQPALLNLDGDGVSERISWMRNSLRLTDRQIS
QAVLKAPLILVRNVEGNLQSKLQWLTEELGATPKDIKDMMGAFPQVITYA
LGQAGPKRLSFLMEEIEMPEARAKKLIIRHPQFVGYSVEDNLKPKMLWLT
EEIGLTKKDLCGILLKVPSLCASSLEGSLKKTASFLTSIGMDEAGVKSMV
CSQPHLLTTSVEDTLKPKVKFLSEGLGLRGTALVTTLKKQPRLLAASENS
LRPRVQFFVRELEMPKASVADMMMIYPNLLELSVDDALRPSVALLRRELG
LSQKKVLDMLRRQPSLLLFAHEGGNSTTTAKGGAKKGGKAQKKGSLHDTV
RFLGEEVGLSKKETVDLLVKSPNAARWSVEGSMKPMMEWFKKEGKLSGAQ
VKIVLVKHPQLLGLSTDNALKPKVSWLRSRLGLNTKEVTSVLAKLPQLLS
YSIEDNLQPKMKFFAETVGINERQLGRLVAKMPQLLSYSMSENLIPKMTY
LESIGLTKEEIMTMITKVPGLLGYSVEDNIKRKVRYLQVTLDADIDEVAG
ILVKYPNILNLSINKNLGPKLEIFMKVMKGERAEVKAAVMQTPSLLGYSL
DKRIFPRLKTMTSLGIVPLFRDHQWHVASYTDKKFRDWLKKMIAEQEGDP
TAQFLETRAKVRSGLRLLTTLSA* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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