mRNA_C-australica_Contig_9990.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9990.1.1
Unique NamemRNA_C-australica_Contig_9990.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: A0A3D3L3R0_9BACT (Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A3D3L3R0_9BACT)

HSP 1 Score: 407 bits (1045), Expect = 3.990e-140
Identity = 195/272 (71.69%), Postives = 221/272 (81.25%), Query Frame = 1
Query:    1 ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDRD 816
            ICGSDI RG    AYHYPLVMGHEFS  VAE+ +   +K+GDRVAVFPL+PTN +E AY TGD+AQLKEY+YFGSR DGAF+E+LRVP  NLF IPDHV   HASMTEPAAVALHGVRKMHITAGD GVVIG GPIGNM AQWL+IHGC  V I DIDD+KLKIAE+MGF  INS   D VEA+   TN +GA RV+EACGLPQTFLQA+++A+R  EVVFMGNI+GEF I EK FS +LRRE+ IYGTWNSK  P G DDW+TVL YMD++
Sbjct:   38 ICGSDIKRGFGNGAYHYPLVMGHEFSAYVAEDAEDGRYKKGDRVAVFPLVPTNTSEPAYQTGDYAQLKEYNYFGSRCDGAFAEFLRVPIKNLFPIPDHVDMVHASMTEPAAVALHGVRKMHITAGDFGVVIGAGPIGNMTAQWLKIHGCKDVAIVDIDDKKLKIAEEMGFIPINSKHTDAVEAVFKLTNDQGANRVVEACGLPQTFLQAINMASRNAEVVFMGNIIGEFKIEEKDFSNMLRREITIYGTWNSKTVPVGNDDWSTVLNYMDKE 309          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: UPI00191E39EA (galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Galbibacter mesophilus TaxID=379069 RepID=UPI00191E39EA)

HSP 1 Score: 400 bits (1027), Expect = 2.030e-137
Identity = 186/272 (68.38%), Postives = 221/272 (81.25%), Query Frame = 1
Query:    1 ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDRD 816
            ICGSD+ RG    AY YPL+MGHEFSGIVAE+K  S++K+GDRVAVFPLIP NKNE AY TGD+AQLKEY+Y GSR DGAFSEY+  P  NLF +P+HV + HASMTEPAAVALHGVRKMHI  GD   VIGGGPIGNM AQWLRIHGC+QV + D+D++KL +A +MGF TIN+AK +  E I  +T GEG ++V+EACGLP+TFLQAL++A+R+GEVVFMGNI G F + EK FS ILR+EL IYGTWNSK  P G DDW+TVL YMD++
Sbjct:   38 ICGSDLVRGFHNGAYFYPLIMGHEFSGIVAEDKPDSNYKKGDRVAVFPLIPINKNEKAYQTGDYAQLKEYNYLGSRSDGAFSEYVYAPVENLFPVPEHVDSIHASMTEPAAVALHGVRKMHINVGDNAAVIGGGPIGNMTAQWLRIHGCNQVFVIDVDEKKLNLASEMGFHTINAAKENVAEVISEKTQGEGVKKVVEACGLPKTFLQALEIASRSGEVVFMGNIHGTFTMEEKDFSNILRKELTIYGTWNSKTIPTGEDDWSTVLKYMDKE 309          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: UPI0015B8AC89 (galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Galbibacter sp. BG1 TaxID=1170699 RepID=UPI0015B8AC89)

HSP 1 Score: 395 bits (1016), Expect = 9.210e-136
Identity = 188/272 (69.12%), Postives = 217/272 (79.78%), Query Frame = 1
Query:    1 ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDRD 816
            ICGSDIPR     AY YPLV+GHEFSG +AE+K    F +G  VAVFPLIP NK E AY TGD+AQLKEY+YFGSR DG F EYLRVP  NLF++P HV   HA+MTEPAAVALHGVRKM I AGDTG+V+GGGPIGN+ AQWLRIHGC +V + DIDDRKL+IA+ MGF  INS+ ++  + I+  TN EG  RV+EACGLP TFLQAL +AAR GEVVFMGNI GEF IGEK FS++LRREL IYGTWNSKI P+G DDW+TVL YMD++
Sbjct:   38 ICGSDIPRAFDNGAYFYPLVLGHEFSGTIAEDKLELGFAKGQHVAVFPLIPKNKKEKAYQTGDYAQLKEYNYFGSRCDGGFQEYLRVPVENLFKVPKHVNLLHAAMTEPAAVALHGVRKMSINAGDTGLVLGGGPIGNLTAQWLRIHGCKEVYVVDIDDRKLEIAQKMGFYPINSSHKNLYDTIMELTNQEGVHRVVEACGLPITFLQALQMAARGGEVVFMGNIHGEFKIGEKDFSSLLRRELRIYGTWNSKIVPRGEDDWSTVLKYMDKE 309          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: A0A2A2R5Q1_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium Tous-C9LFEB TaxID=1982333 RepID=A0A2A2R5Q1_9BACT)

HSP 1 Score: 386 bits (991), Expect = 7.890e-132
Identity = 182/272 (66.91%), Postives = 212/272 (77.94%), Query Frame = 1
Query:    1 ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNK-NETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDR 813
            ICGSDIPRG  GKAYHYPLVMGHEFSG+V E        +G RVAVFPL+P +  N+ A  TGD+AQ ++YDY+GSRRDGAF+EYLRVPE NLF +PDHV   HASMTEPAAVALHG+R++H  AGD  VV G GPIGNM AQWLRIHGC ++ + D+D RKL ++E MGF  IN+A+ DPVE + + T G G QR +EACGLP TFLQA+ VA R GEV+FMGNI GEF IGEK FS ILR+EL I GTWNSKI P GTDDWTTVL ++DR
Sbjct:   41 ICGSDIPRGFGGKAYHYPLVMGHEFSGVVEEPATGGRLAKGTRVAVFPLLPRDSSNDPACQTGDYAQARDYDYYGSRRDGAFAEYLRVPEWNLFPVPDHVNLLHASMTEPAAVALHGIRRLHCQAGDDAVVFGAGPIGNMAAQWLRIHGCARIFVVDVDARKLSLSESMGFLPINAAQTDPVETVKAATGGAGVQRSVEACGLPLTFLQAVKVAGRFGEVLFMGNIAGEFKIGEKDFSDILRKELTILGTWNSKIAPLGTDDWTTVLKHLDR 312          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: A0A367GQJ5_9SPHI (Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Mucilaginibacter hurinus TaxID=2201324 RepID=A0A367GQJ5_9SPHI)

HSP 1 Score: 384 bits (987), Expect = 2.350e-131
Identity = 184/272 (67.65%), Postives = 215/272 (79.04%), Query Frame = 1
Query:    1 ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDRD 816
            +CGSDIPRG    AYHYPLVMGHEFSG+VAE+K  S+F +GD+VA+FPL+P N       TGD+AQ   Y+YFGSR DG FSEYL +PE NLF+IP+HV   HA+M EPAAVALHGVRK++I AGDTG+V G GPIGNM AQWLRIHGC +VII DIDD+KL+IA DMGF+ INS ++D V+     T+G GA RV+EA G+P TFLQA+   AR GEVVFMGNI G F+IGEK FS ILR+EL IYGTWNSKI P GTDDWTTVL YMDR+
Sbjct:   37 VCGSDIPRGFQAGAYHYPLVMGHEFSGVVAEDKHPSNFTKGDKVAIFPLMPCNTCAPC-QTGDYAQCLNYNYFGSRCDGGFSEYLFIPERNLFKIPEHVNILHAAMVEPAAVALHGVRKLNIKAGDTGLVFGAGPIGNMTAQWLRIHGCKKVIIADIDDKKLEIAADMGFEAINSKRKDAVKLTEELTDGRGADRVVEAVGMPATFLQAIQATARFGEVVFMGNIHGTFSIGEKDFSNILRKELTIYGTWNSKIVPVGTDDWTTVLKYMDRE 307          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: A0A2T6CYQ3_9BACT (Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Spartobacteria bacterium LR76 TaxID=2161866 RepID=A0A2T6CYQ3_9BACT)

HSP 1 Score: 373 bits (958), Expect = 7.340e-127
Identity = 178/272 (65.44%), Postives = 209/272 (76.84%), Query Frame = 1
Query:    1 ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTN-KNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDR 813
            ICGSDI RG  GKAYHYPLVMGHEFSG++    +   F +G RVAVFPL+P   +++ A  TGD+AQ ++YDY+GSRRDGAFSEYL +PE NLF +PD V   HASMTEPAAVALHG+R+MH  AGD  VV G GPIGNM AQWLRIHGC +V + DID+RKL IAE MGF  IN+ + D VEAI + TNG G  R +EACGLP+TFLQA+ VA   GEV+FMGNI GEF IGEK FS ILR+EL I GTWNSK+ P G DDW+TVL ++DR
Sbjct:   38 ICGSDIGRGFRGKAYHYPLVMGHEFSGVIERPAEGGRFAKGARVAVFPLLPLEAESDPACQTGDYAQARKYDYYGSRRDGAFSEYLEIPEWNLFPVPDEVNLLHASMTEPAAVALHGIRRMHCQAGDDAVVFGAGPIGNMAAQWLRIHGCSRVFVVDIDERKLGIAEKMGFLPINAVETDAVEAIQAATNGAGVARSVEACGLPKTFLQAVKVAGAFGEVLFMGNIAGEFRIGEKDFSDILRKELTILGTWNSKVSPIGRDDWSTVLKFLDR 309          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: A0A651H2S8_9BACT (Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A651H2S8_9BACT)

HSP 1 Score: 369 bits (948), Expect = 2.260e-125
Identity = 178/273 (65.20%), Postives = 213/273 (78.02%), Query Frame = 1
Query:    1 ICGSDIPRGI-AGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDRD 816
            ICGSDIPR   AG AYHYPLV+GHEFS +V E+      + GDRVAVFPL+P    +  + TGD+AQ   YDYFGSRRDG   E+LRVP  NLF +PD V+  HA+ TEPAAVALHGVRKM I AGDTG+VIG GPIGNM AQWLRIHGC +VI+ D+D RKL++A  MGF+TI+S + DPV+ +L+ T G GA+RV+EACGLP TF+QA+  AA  GEVVFMGN+ G+F IGEKAFS ILRREL + GTWNSK+ P+GTDDW+TVL +MDRD
Sbjct:   39 ICGSDIPRAFDAGGAYHYPLVLGHEFSAVVEED--GPGVRRGDRVAVFPLLP-RPGQPEFDTGDFAQTSNYDYFGSRRDGGMQEWLRVPVANLFALPDEVRLLHAACTEPAAVALHGVRKMRIGAGDTGLVIGAGPIGNMTAQWLRIHGCARVILADVDARKLELAASMGFETIDSRQSDPVQQLLNLTGGRGAERVVEACGLPATFVQAIACAATFGEVVFMGNLHGDFKIGEKAFSNILRRELRLLGTWNSKVVPRGTDDWSTVLKFMDRD 308          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: A0A832M5S5_9BACT (Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A832M5S5_9BACT)

HSP 1 Score: 363 bits (933), Expect = 4.150e-123
Identity = 177/273 (64.84%), Postives = 210/273 (76.92%), Query Frame = 1
Query:    1 ICGSDIPRGI-AGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDRD 816
            ICGSD+PR    G AYHYPLV+GHEFS +V E+  A  F +GDRVAVFPLIP    +  + TGD+AQ   YDYFGSRRDG   E LRVP  NLFR+PD V   HA+ TEPAAVALHGVRK+ I AGDT +VIG GPIGNM AQWLRIHGC +V+I D+D RKL++A  MGF+TI+S +RDPV+ +   T G GAQRV+EACGLP TF QA+  AA  GEVVFMGN+ GEF + EK FS+ILRREL ++GTWNSK+ P+GTDDW+TVL YMDR+
Sbjct:   39 ICGSDLPRAFDPGGAYHYPLVLGHEFSAVVDED--AHGFHKGDRVAVFPLIP-KPGQPCFDTGDFAQTTNYDYFGSRRDGGMQEILRVPAANLFRLPDPVDLLHAACTEPAAVALHGVRKLRIAAGDTALVIGAGPIGNMTAQWLRIHGCARVLIADVDPRKLELAASMGFETIDSKRRDPVQQLKDLTGGLGAQRVVEACGLPATFAQAIACAATFGEVVFMGNLHGEFRLPEKDFSSILRRELTLHGTWNSKVVPRGTDDWSTVLKYMDRE 308          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: A0A660U2W9_9SPIR (Galactitol-1-phosphate 5-dehydrogenase n=2 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A660U2W9_9SPIR)

HSP 1 Score: 342 bits (877), Expect = 1.230e-114
Identity = 159/272 (58.46%), Postives = 206/272 (75.74%), Query Frame = 1
Query:    1 ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDRD 816
            ICGSDI RG   +AYHYPL+MGHEFSG++ ++ + + ++EG R+ VFPL+P  K + A  TG++AQ   YDYFGSRR+GAF+EYL VPE N+F IPDHV+  HA+MTEP AVALHGVRK ++  G+   V GGGPIGNM AQWL++ G ++VI+ DID++KL IA+ MGF   NS K DPVE IL  T+GEGA   IEACGLP T+ QA++  +R GEVV +GNI G+F + +K  S +LR+EL +YGTWNSKI P G DDW+TVL +MD++
Sbjct:   39 ICGSDIHRGFEKEAYHYPLIMGHEFSGVIEKSFKGAKYREGQRITVFPLLPCYKCK-ACQTGNYAQCSNYDYFGSRRNGAFAEYLYVPEKNIFPIPDHVELIHAAMTEPCAVALHGVRKFNLKGGERAAVFGGGPIGNMAAQWLKLKGSEKVIVIDIDEKKLNIAQKMGFIPCNSKKTDPVEYILKNTDGEGADVSIEACGLPITYRQAINSTSRFGEVVLLGNIAGDFILPQKEVSNMLRKELKVYGTWNSKIVPTGIDDWSTVLKFMDKE 309          
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Match: A0A556QP62_9BACT (Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Rariglobus hedericola TaxID=2597822 RepID=A0A556QP62_9BACT)

HSP 1 Score: 335 bits (860), Expect = 5.870e-112
Identity = 167/272 (61.40%), Postives = 196/272 (72.06%), Query Frame = 1
Query:    1 ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLIPTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVKTRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCDQVIITDIDDRKLKIAEDMGFQTIN-SAKRDPVEAILSQTNGEGAQRVIEACGLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTWNSKIFPKGTDDWTTVLIYMDR 813
            +CGSDIPR   G AYHYPLV+GHEFSG+V  +    + K+GDRVA+FPLIP    E A+ TGD+AQ K YDYFGSRRDG   E++ VPE NL  +P HV   HA+ TEPAAVALHGVRKM + AGD   V G GPIGN+ AQWL+I GC +V + D+D RKL +   +G   +N  +  D V+ IL  T GEG QRV+EA G P TFLQA  VAA  GEVVFMGNI GEF IGEK FS+ILRREL IYGTWNSK+ P GTDDW+ VL +MDR
Sbjct:   43 VCGSDIPRAFDGGAYHYPLVLGHEFSGVVETD--GLTRKKGDRVAIFPLIP-KPGEKAFDTGDYAQTKHYDYFGSRRDGGMGEFVIVPERNLLPVPAHVPLLHAACTEPAAVALHGVRKMRVQAGDDAAVFGAGPIGNLVAQWLKISGCARVFVVDVDQRKLDLVAALGCIPVNPKSGGDAVKQILDATGGEGVQRVVEAVGHPTTFLQATQVAAAFGEVVFMGNIHGEFKIGEKDFSSILRRELTIYGTWNSKVVPLGTDDWSNVLKFMDR 311          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9990.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3L3R0_9BACT3.990e-14071.69Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Can... [more]
UPI00191E39EA2.030e-13768.38galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Gal... [more]
UPI0015B8AC899.210e-13669.12galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Gal... [more]
A0A2A2R5Q1_9BACT7.890e-13266.91Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
A0A367GQJ5_9SPHI2.350e-13167.65Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Muc... [more]
A0A2T6CYQ3_9BACT7.340e-12765.44Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Spa... [more]
A0A651H2S8_9BACT2.260e-12565.20Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Pun... [more]
A0A832M5S5_9BACT4.150e-12364.84Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Ver... [more]
A0A660U2W9_9SPIR1.230e-11458.46Galactitol-1-phosphate 5-dehydrogenase n=2 Tax=Spi... [more]
A0A556QP62_9BACT5.870e-11261.40Galactitol-1-phosphate 5-dehydrogenase n=1 Tax=Rar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9990contigC-australica_Contig_9990:29..844 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1197706.AKKK01000039_gene3931
PFAMsADH_N,ADH_zinc_N
Model size816
Max annot lvl201174|Actinobacteria
KEGG rclassRC00085,RC00102
KEGG koko:K00008,ko:K00094
KEGG ReactionR00875,R01896,R05571
KEGG Pathwayko00040,ko00051,ko00052,ko01100,map00040,map00051,map00052,map01100
KEGG ModuleM00014
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.39e-85
EggNOG OGsCOG1063@1|root,COG1063@2|Bacteria,2IDWX@201174|Actinobacteria
EC1.1.1.14,1.1.1.251
DescriptionGlucose dehydrogenase C-terminus
Cds size816
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588867.1688998-CDS-C-australica_Contig_9990:28..8441682588867.1688998-CDS-C-australica_Contig_9990:28..844Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9990 29..844 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9990.1.1prot_C-australica_Contig_9990.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9990 29..844 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9990.1.1

>prot_C-australica_Contig_9990.1.1 ID=prot_C-australica_Contig_9990.1.1|Name=mRNA_C-australica_Contig_9990.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=272bp
ICGSDIPRGIAGKAYHYPLVMGHEFSGIVAENKQASSFKEGDRVAVFPLI
PTNKNETAYHTGDWAQLKEYDYFGSRRDGAFSEYLRVPEVNLFRIPDHVK
TRHASMTEPAAVALHGVRKMHITAGDTGVVIGGGPIGNMCAQWLRIHGCD
QVIITDIDDRKLKIAEDMGFQTINSAKRDPVEAILSQTNGEGAQRVIEAC
GLPQTFLQALDVAARAGEVVFMGNIVGEFAIGEKAFSTILRRELNIYGTW
NSKIFPKGTDDWTTVLIYMDRD
back to top

mRNA from alignment at C-australica_Contig_9990:29..844+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9990.1.1 ID=mRNA_C-australica_Contig_9990.1.1|Name=mRNA_C-australica_Contig_9990.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=816bp|location=Sequence derived from alignment at C-australica_Contig_9990:29..844+ (Chrysoparadoxa australica CS_1217)
ATTTGCGGTTCTGATATCCCAAGAGGTATTGCAGGAAAAGCTTATCATTA CCCACTGGTCATGGGGCATGAATTCAGTGGGATTGTAGCGGAAAATAAAC AAGCGAGTAGCTTTAAGGAAGGGGACCGTGTGGCCGTATTCCCATTAATT CCGACTAATAAAAATGAAACAGCCTATCATACAGGTGATTGGGCACAGTT AAAGGAGTATGATTACTTTGGTTCCAGGAGAGATGGTGCATTCAGTGAAT ACCTTAGGGTACCTGAAGTAAACCTTTTTCGGATTCCTGACCATGTCAAG ACCAGACATGCCTCAATGACTGAGCCAGCAGCAGTTGCTTTACATGGAGT GAGGAAAATGCATATTACCGCAGGGGATACTGGCGTTGTTATTGGTGGAG GTCCGATAGGCAATATGTGTGCACAGTGGTTGAGGATTCATGGATGTGAC CAGGTGATCATTACAGATATAGATGACCGGAAATTAAAGATTGCTGAAGA CATGGGTTTCCAGACCATCAATAGTGCTAAACGTGACCCTGTTGAAGCGA TTTTATCTCAAACAAATGGAGAAGGTGCACAGCGGGTAATTGAAGCTTGC GGCTTACCTCAAACTTTTTTACAGGCATTGGATGTCGCTGCAAGAGCTGG GGAAGTTGTATTTATGGGAAATATAGTGGGTGAATTCGCAATTGGTGAAA AAGCATTCAGCACAATTCTCCGACGTGAGTTGAATATCTATGGAACCTGG AACAGTAAGATATTTCCAAAGGGAACAGATGATTGGACCACGGTATTAAT ATATATGGATAGAGAT
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_9990:29..844+

>mRNA_C-australica_Contig_9990.1.1 ID=mRNA_C-australica_Contig_9990.1.1|Name=mRNA_C-australica_Contig_9990.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=816bp|location=Sequence derived from alignment at C-australica_Contig_9990:29..844+ (Chrysoparadoxa australica CS_1217)
ATTTGCGGTTCTGATATCCCAAGAGGTATTGCAGGAAAAGCTTATCATTA
CCCACTGGTCATGGGGCATGAATTCAGTGGGATTGTAGCGGAAAATAAAC
AAGCGAGTAGCTTTAAGGAAGGGGACCGTGTGGCCGTATTCCCATTAATT
CCGACTAATAAAAATGAAACAGCCTATCATACAGGTGATTGGGCACAGTT
AAAGGAGTATGATTACTTTGGTTCCAGGAGAGATGGTGCATTCAGTGAAT
ACCTTAGGGTACCTGAAGTAAACCTTTTTCGGATTCCTGACCATGTCAAG
ACCAGACATGCCTCAATGACTGAGCCAGCAGCAGTTGCTTTACATGGAGT
GAGGAAAATGCATATTACCGCAGGGGATACTGGCGTTGTTATTGGTGGAG
GTCCGATAGGCAATATGTGTGCACAGTGGTTGAGGATTCATGGATGTGAC
CAGGTGATCATTACAGATATAGATGACCGGAAATTAAAGATTGCTGAAGA
CATGGGTTTCCAGACCATCAATAGTGCTAAACGTGACCCTGTTGAAGCGA
TTTTATCTCAAACAAATGGAGAAGGTGCACAGCGGGTAATTGAAGCTTGC
GGCTTACCTCAAACTTTTTTACAGGCATTGGATGTCGCTGCAAGAGCTGG
GGAAGTTGTATTTATGGGAAATATAGTGGGTGAATTCGCAATTGGTGAAA
AAGCATTCAGCACAATTCTCCGACGTGAGTTGAATATCTATGGAACCTGG
AACAGTAAGATATTTCCAAAGGGAACAGATGATTGGACCACGGTATTAAT
ATATATGGATAGAGAT
back to top