mRNA_C-australica_Contig_999.9.2 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_999.9.2
Unique NamemRNA_C-australica_Contig_999.9.2
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: A0A835ZGH2_9STRA (Long chain acyl-CoA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGH2_9STRA)

HSP 1 Score: 790 bits (2040), Expect = 6.490e-278
Identity = 388/643 (60.34%), Postives = 488/643 (75.89%), Query Frame = 2
Query:  302 MNYETLVDMHLITKEAFMDRQVQYNFHLAPQPPVTSRAPPLPRPLFGEKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFDEPASDT-HSFASFMEGTSET--APAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRDGQLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFELDGERYFRTGDLGTMVEGKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKTDLGPN--ATKEELANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLYGEARQEFLARE 2215
            M+++TLVDMHL+T+++F +R                       PLFG K  K+G + WT+YK+FG  VD  R +L  +G+ RGD VACIS NR EWAV AYA YSLG  FVPMYE+Q  KDWRYI+E++ AK LFVST+ ++  T+HFA V+G ++ V+CFD    D  H+F+  +   ++    PA +P   DLATLIYTSGTTG PKGV+L+H N++SN+ GLR +LPE +++CHDRSLSFLPWAH YGQT ELHALMAHGAS+GIAEG+DKL  NL E +PT+L++VP LFK+VYDG+HAKV +     Q LFKR+LQ AH  RM   S + +GA+ ++EH++LDK+VL K+R+ FGGNL+ SFVGGAA+P+EVLSFF+N GI ICEGYGLTETSPL+++ + EL HR+LGTTGR L GVTV I  DG+  GPDEEGE+CVSGPNVM+GY+ NP AT EVM E+DG+R+FRTGDLG + EG YLR+TGR+KE +KLENGKYVVPGPIEAAL+SSKYITQALL+G ++PFNVAL+VPDW +L+ WA  KTDL P+  A K  LA S  V +LI+GE+Q ALE +KKYEIP+RW LLEEGFT ERGMLTPK+SVKRH+VVK Y   I HLY +     + +E
Sbjct:    1 MDFDTLVDMHLVTRQSFGNR-----------------------PLFGTK--KDGTYRWTTYKEFGRKVDVARVALARLGIARGDVVACISSNREEWAVTAYAVYSLGAAFVPMYEDQLVKDWRYIVENSGAKALFVSTEKVYQSTYHFAEVVGQVRSVHCFDAARPDAPHAFSRLLAEAAQAPPVPAIIPNPRDLATLIYTSGTTGTPKGVRLTHANLMSNVLGLRTVLPEGVLTCHDRSLSFLPWAHSYGQTLELHALMAHGASVGIAEGIDKLLGNLAEVRPTMLFSVPALFKRVYDGVHAKVQAGPPVSQLLFKRALQAAHHARMARVSGRELGALASLEHRVLDKVVLGKIRNSFGGNLRYSFVGGAATPMEVLSFFDNAGIQICEGYGLTETSPLISINSPELKHRRLGTTGRALEGVTVKIVVDGKEVGPDEEGEICVSGPNVMEGYHLNPAATDEVMMEMDGKRFFRTGDLGRLEEGTYLRVTGRLKELFKLENGKYVVPGPIEAALTSSKYITQALLFGADKPFNVALLVPDWAMLQEWAKGKTDLTPDQLADKHALAASTAVQHLIQGEIQQALEGSKKYEIPRRWELLEEGFTQERGMLTPKMSVKRHVVVKHYHELIHHLYNDQGPALMQQE 618          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: A0A6H5JW39_9PHAE (AMP-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JW39_9PHAE)

HSP 1 Score: 796 bits (2057), Expect = 6.920e-278
Identity = 415/761 (54.53%), Postives = 504/761 (66.23%), Query Frame = 2
Query:  242 HKLAFSTGTQAAPIHETPHYMNYETLVDMHLITKEAFMDRQVQYNFHLAPQPPVTSRAPPLPRPLFG-EKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFDEPASDTHSFASFMEGTS---------------------------------------------------------ETAPAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRDGQLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFELDGER------------------------------------------YFRTGDLGTMVEGKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKTDLGPNATKEELANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLYGE-ARQEFLAREAA 2221
            H L       + P+H TPHYM+Y+TLVDMHLIT+++F +R                       PLFG +K  K+  + W +YK+FG  VDRCR +L  +G+T GDTV  IS NR EWAVCAYATYSLG VFVPMYEEQRP+DWRYILED+ AK LFV+TK I+ +T HFAGV GN+Q+V+CFD+PA    SF   ++ ++                                                         E  PA++P  ++LATLIYTSGTTGKPKGV LSH NIISNI G+R ILPEDL+SCHDRSLSFLPWAHCYGQTAELHALMAHGAS+GI+  V  L + L E +PT+LYAVP LFK+V D IHAKV+ +S  +Q+LFKR+LQ AHRRR H+E+ +PVGA L ++H+LLD+ VLSK+RDRFGGNLKVSFVGGAA+ +EVL+FFENI I I EGYGLTETSP+VTV T E   R+LG+TGR L  VTV I   G+     EEGEVCVSGPNVMQGYNN P+A+AEV+F+LDG+R                                          YFRTGDLG M +G YLRITGRIKEQYKLENGKYVVPGPIEAA++SS YITQAL++GDNRPFNVAL+ PDW L+R+WA  K       + EELA+ +VV NLI GE+  +L+  KKYE+P+ + LLEEGFT E  M T KLS KRH+V+K Y  T+ H+YG+   Q  L  +AA
Sbjct:   55 HHLGSKAPAASPPVHATPHYMDYDTLVDMHLITRQSFGNR-----------------------PLFGTQKGDKDSPFEWLTYKEFGKQVDRCRAALARLGITHGDTVGIISNNREEWAVCAYATYSLGAVFVPMYEEQRPQDWRYILEDSGAKCLFVATKGIYSETFHFAGVQGNVQNVFCFDQPAGQPGSFKDLLDSSAGEGAVGRGGKTIEKGRTELHAHRNAAFRLMVEQVGSLLRSPFVAAAAVPLALRDLEEEKVPAYIPDPSELATLIYTSGTTGKPKGVMLSHGNIISNIVGIRAILPEDLVSCHDRSLSFLPWAHCYGQTAELHALMAHGASMGISRDVTALLEQLAEVKPTLLYAVPQLFKRVCDAIHAKVAESSPTKQYLFKRALQTAHRRRKHIEAGEPVGAALELQHRLLDQAVLSKIRDRFGGNLKVSFVGGAATNMEVLNFFENIDIKILEGYGLTETSPMVTVNTPEQEFRRLGSTGRCLADVTVKIMMGGEEMPAGEEGEVCVSGPNVMQGYNNLPEASAEVLFDLDGQRQAGTGFETVILATVSTFFSRLCPVSYAQTRLIGTAWKTIESRYFRTGDLGRMEDGTYLRITGRIKEQYKLENGKYVVPGPIEAAMTSSTYITQALVFGDNRPFNVALVFPDWNLVRSWAESKGRASEGTSLEELASMDVVKNLIAGEIALSLDGFKKYEMPRTFELLEEGFTKENNMQTQKLSTKRHVVIKHYHDTLMHMYGDRVHQNHLQEQAA 792          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: A0A7S2XXE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXE0_9STRA)

HSP 1 Score: 644 bits (1662), Expect = 2.040e-220
Identity = 330/610 (54.10%), Postives = 441/610 (72.30%), Query Frame = 2
Query:  428 RPLFGEK-RQKEGD--WHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFDEPASD-THSFASFM-EGTSETAPAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESD---QPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSIC-RDGQLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFEL--DGERYFRTGDLGTMVE------GKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKTD--LGPNATKEELANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLYGEARQE 2200
            RP+FG +    EG   W W +Y DF   VD  ++ L   G+  GD VA IS NR EWAV AYATY LG  +VPMYE Q+PKDW YIL D+ AKVL VSTK I+  T+H+AGVLGN++ VYCFDE   D +H FAS + +G+ +  P+    ++D+ATLIYTSGTTG PKGV L+H+N+I NI  L + LP++ ++ + RSLSFLPWAHCYGQT ELH  +AHG  + +AE V+KL DNL E +PT+L++VPTLFKKVYDG++ K+++ S+ +Q LF ++L+++ ++   +E+D   +P+G + +++  +LDKLVLSK+RDR GG +KV++VGGAA+  EVL+FF+ IG+ ICEGYGLTETSP++++       R +GTTGR L  VTV +  +DG+   P +EGE+CVSGPNVM+ Y+NN  AT EV+  L  DG RYFRTGDLG ++       G +L++TGRIKE YKLENGKYVVPGP+EA LS+S+YI+Q L+YGDNRP+N+ALIVPDW+L+  WA+E        +ATK  LA+   V +LIEGE+Q   E  K YE+P+RW LL E  TAERGMLTPK+S+KRH+V K Y G +   YG + +E
Sbjct:   28 RPVFGTRVGNGEGAEAWEWMTYSDFKTEVDNLKSGLAGAGICPGDKVAVISNNRWEWAVGAYATYGLGAAYVPMYEAQKPKDWSYILGDSGAKVLLVSTKEIYRKTYHYAGVLGNVKAVYCFDEEDPDASHGFASLLAQGSKQPPPSHSAEESDVATLIYTSGTTGNPKGVVLTHSNLIHNIWALENTLPKNTLNKNHRSLSFLPWAHCYGQTCELHNFLAHGGQIAVAESVEKLVDNLAEIKPTMLFSVPTLFKKVYDGVYTKMAAESSIKQELFAKALEVSAQK---IEADFKGEPLGLIPSLQFSVLDKLVLSKIRDRLGGKIKVAWVGGAATAPEVLTFFDQIGVSICEGYGLTETSPIISINCPSAKGRMVGTTGRALPKVTVRLLGQDGKEVDPGQEGEICVSGPNVMKEYHNNAAATEEVLVTLAQDGLRYFRTGDLGRLIHCPHRGGGPFLKVTGRIKELYKLENGKYVVPGPVEAQLSNSRYISQVLVYGDNRPYNLALIVPDWDLVADWAAEADPPLAAGSATKRALASHLGVQHLIEGELQRHGEGLKGYELPRRWVLLGEALTAERGMLTPKMSIKRHVVFKAYAGAMEAAYGRSEEE 634          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: A0A6U4FS11_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FS11_9STRA)

HSP 1 Score: 601 bits (1549), Expect = 3.790e-203
Identity = 307/608 (50.49%), Postives = 409/608 (67.27%), Query Frame = 2
Query:  428 RPLFGEKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFDEPASDTHSFASFME----GTSETAPAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILP--EDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRDGQLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFELDGERYFRTGDLGTMVEGKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKTDLGPNATKEELANSEVVCNLIEGEVQGAL--ESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLYG--EARQEFLAREAA 2221
            +P+FG K Q++G++ W +Y ++G  VD     L  +GV +GD VA IS NR EWAV ++ TY +G V+VPMYE Q P DW+YILED+ AKVL  +T+ I+    H    +  ++ V  FD P    HSF   +     G    APAF    +DLA+LIYTSGTTGKPKGV L+H+N+ SN+TG+R +    E ++S  D SL+FLPWAHCYGQ  ELH+ +A G+++GIAEG +KL +NL E +PTVLY+VPTLFK+VYDG+H K++  S+ ++ LF+ ++   +  R+  E          M+  +LDKLVLSK+RDR GG LK  F GGAA PL VL FFENIG+PI EGYGLTETSP+V + +T+   RKLG +G  + GVTV+   DG+  GP EEGE+CVSGPNVM+GY  N +A AE   E DG+ YFRTGD+G + E   L+ITGR+KEQ+KLENGKYVVPGP+E A  +S +I Q +++GDNRP+NVAL+VPD  +   W  +      +A  EE+  + +V  L + E++GA   E  KKYE+P+RW+L+EE FTA    LTPKLSVKRH+V K YE  +  LY   + R +    EAA
Sbjct:   49 KPIFGTKNQEKGEFEWITYGEWGEKVDHFSAVLHNLGVGQGDRVAVISNNRVEWAVGSFGTYGVGAVYVPMYEAQLPTDWQYILEDSGAKVLLCATEEIYEQCKHLPESIPTLEKVLGFDAPHESEHSFYFHLNKAESGAFPPAPAFEGKGSDLASLIYTSGTTGKPKGVMLTHSNLSSNVTGVRIVFQDYESMLSDTDVSLAFLPWAHCYGQNCELHSSLAIGSAMGIAEGTEKLLENLAEVRPTVLYSVPTLFKRVYDGVHNKMAEESSIRRGLFEAAVAAGNEMRLAKEKGVEPNIFTKMQFAVLDKLVLSKIRDRMGGRLKNVFTGGAACPLHVLEFFENIGVPINEGYGLTETSPIVVINSTDYPTRKLGCSGIPVEGVTVTCFMDGKPVGPGEEGEICVSGPNVMKGYWQNDEANAEAFMEYDGKTYFRTGDMGNVDEANRLKITGRLKEQFKLENGKYVVPGPLEEAFCTSPFIQQCVIWGDNRPYNVALVVPDRAVFDPWLQKNAPHLADAPWEEVIANPIVQELFDAEMEGAAAREVLKKYEVPRRWYLVEEAFTAANNFLTPKLSVKRHVVFKVYEDKLLELYQAPDQRVQKQVEEAA 656          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: I2CP10_NANGC (Long-chain acyl-CoA ligase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP10_NANGC)

HSP 1 Score: 528 bits (1359), Expect = 3.510e-174
Identity = 287/601 (47.75%), Postives = 387/601 (64.39%), Query Frame = 2
Query:  425 PRPLFGEKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFD---EPASDTHSFASFMEGTSETAPAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRDGQLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFELDGERYFRTGDLGTMVEG----KYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKTDLGPNA--TKEEL-ANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLY-GEAR 2194
            P+P  G +    G + + ++ DF   V+R R  L E GV RGD VA IS NR EWAV AYA +SLG ++VPMYE+QR  +  YIL DA+AK+L VS + I   + HF   L  +Q V+CFD   +P       ASF+       P+      +++TLIYTSGTTG PKGVQLSH N+ S++ G+  ++P++ I    RS++FLPWAHC+G+T ELH  +  GA + + E +  L + L+E +PT+LYAVPTLFK+VYD I  K+   +   Q L  R+L +A  RR  +   +  G  L +++ +LDKLVLSK +   GG L  S+VGG+A P+EV +FFENIG+ ICEGYGLTETSPL+ V   ++  R++GT G+ +G   V + RDG    P EEGE+ V+GP V  GY+N P  TAE   EL G RYF+TGDLG  V G      L+ITGR+KE YKLENGKYVVP  IE A++ +  ++QAL+YG +RPFNVALIVPDWE LRA+  + T  G  +  T+EE+ A+ +V   ++E  +    +  KKYEIP R  L++E FT E  MLT KLS+KRH VVK+Y   +  LY GE++
Sbjct:   94 PKPFLGCRPPNGGPFEFITFSDFDEQVNRARVLLHEAGVGRGDKVAAISANRIEWAVSAYACFSLGAIWVPMYEQQRLNECEYILRDADAKLLLVSKERILDKSRHFVSELPALQDVWCFDVDFQPRMKVVDPASFL-------PSVPIEPEEVSTLIYTSGTTGTPKGVQLSHRNLTSDVKGMTVVIPDEAIPV-PRSVAFLPWAHCFGKTCELHNALQRGAQVAVVEDLAALPEALLEVKPTMLYAVPTLFKRVYDKIQDKIQKETPFTQTLIARALAVAEERRSLMMEGESPGPWLGLQYSVLDKLVLSKFKTPLGGELNSSYVGGSAMPVEVANFFENIGVAICEGYGLTETSPLICVNPFDVRVRRIGTVGQLIGDADVRVVRDGVEVEPGEEGEIWVAGPFVFSGYHNKPAETAEAFAELHGTRYFKTGDLGRFVRGGKGVPLLKITGRVKELYKLENGKYVVPALIEKAMAEADLVSQALVYGSDRPFNVALIVPDWEKLRAYGVQHTGGGVTSLSTQEEIGAHPKVQDYVLEQLIVSCKDKLKKYEIPSRVVLIKEAFTVENEMLTQKLSIKRHQVVKKYGPDVEALYSGESK 686          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: D0LX32_HALO1 (AMP-dependent synthetase and ligase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) TaxID=502025 RepID=D0LX32_HALO1)

HSP 1 Score: 522 bits (1344), Expect = 3.830e-173
Identity = 275/593 (46.37%), Postives = 384/593 (64.76%), Query Frame = 2
Query:  428 RPLFGEKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFDEPASDTHSFASFME-GTSETAPAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRD-GQLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFELDGERYFRTGDLGTMVEGKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKT------DLGPNATKEELANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLY 2182
            R +FG K   EG + W +Y DF  LV+R R +L ++GV  GD VA +S NR EWAV AYATYSLGG +VPMYE Q P + RYI+ED+N+KV   +T+AI+ +     G + +++H  CFD   S  HS+   +  G      +  P   DLA L+YTSGTTGKPKGV LSHNNI SN+  + D+ P   +S  D + SFLPWAH +GQTAELH +++ GAS+G+AE V  L +N +E +PTVL AVP +F ++YDG+  +++     +Q LF+ +L ++ +R   +        +L ++HKL +++V +K+++RFGG L+    GGAA  +EV  F +N+GI + EGYGLTETSP+ TV       R++GT G+ +  V++ IC + G+L  P+ +GEV +SGPN+MQGY+  P+ATAEVM E+DG++ FRTGD+G + +  +L ITGR KEQYKLENGKYVVP  +E  L  S +ITQA +YGDN+PFNV LIVPD+E ++ WA          DL P A     A++ V   + E E+       K +E PKRW LL E F+ E G++TPK+SV+R  V   Y+  +  LY
Sbjct:   22 RRVFGTKL--EGIYRWITYADFASLVNRFRAALAQLGVEAGDRVAVVSNNRVEWAVGAYATYSLGGHYVPMYEAQSPAERRYIIEDSNSKVALAATEAIYQELAGLIGEVDSLEHAICFDASESAPHSYLHHLAVGAENPVSSVHPSPDDLAGLLYTSGTTGKPKGVMLSHNNICSNLRVMPDLFP---LSHEDVTCSFLPWAHAFGQTAELHGIISAGASMGLAESVQTLMENFLEVRPTVLLAVPRIFHRIYDGVKKRMADEPKLRQKLFEHALSVSQKR-TEMRDHGGSSTLLDIQHKLFERVVFAKIKERFGGRLRFVMSGGAALAVEVAEFIDNLGITVFEGYGLTETSPVATVN--RPGARRIGTVGQAIPDVSIYICDEQGKLLPPETDGEVLISGPNIMQGYHGLPEATAEVMVEVDGKQAFRTGDMGRLSQDGFLSITGRFKEQYKLENGKYVVPTLLEDQLKLSGFITQAFIYGDNKPFNVCLIVPDFEAIQKWAKSDEGGGVSGDLSPEAL---CADARVHAKIGE-ELAAYGAEFKHFEQPKRWKLLVEDFSPENGLMTPKMSVRRRAVTARYQDELDKLY 602          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: B8BZX2_THAPS (AMP-binding domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZX2_THAPS)

HSP 1 Score: 519 bits (1337), Expect = 1.760e-172
Identity = 274/586 (46.76%), Postives = 376/586 (64.16%), Query Frame = 2
Query:  455 KEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGN---IQHVYCFDEPASDTHSFASFME-GTSETAPAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDIL--PEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRDG--QLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFEL-DGE-RYFRTGDLGTMVEGKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKTDLGPNATKEELANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLY 2182
            ++G + W +Y ++G +VD CRT L+++G+     +  IS NR EWA  A A YSL    VPMYE Q PKDW YIL D+    LF ST+ I         VL N   + +  CF+ P  + HS  + +E    +      P   DLA LIYTSGTTGKPKGV+L+H+N +SN+  +R +   P D I   DRSL+FLPWAH YGQT EL   ++HG S+GI  GV ++ ++L   QPTVL+AVPTL+KKVYDG+   + ++S  +Q L + +L +    R + E+   +G V  ++HK+LD +V SK+R RFGGNL+  FV GAA P E++ F ++IGIPICEGYGLTETSP++ +       RKLG+ G+ +GGV V I      Q  GP +EGE+C  G NVM+GY  NP+ATAEV+    DG+ R F TGDLGTM +  ++ +TGR+KEQYKLENGKYVVP PIE ++S S++I+Q ++ G NRP NVAL+VPDW  +RA       +G + ++++L N + V  LI+ E+       KKYE+PK W  +   FTA   MLTPK+S++R IV+K YE  + H+Y
Sbjct:    2 EKGAFEWMTYGEYGEMVDACRTVLKDLGIKEHSKIGIISNNRWEWAALASAAYSLNAAIVPMYESQLPKDWTYILNDSECSALFCSTEEIFVKV--VKEVLPNTPLVSNTLCFNTPVGEPHSLLTAIEHAKGKETGVIAPTPEDLAGLIYTSGTTGKPKGVELTHDNFVSNVYAVRTMAEDPTDFIRSSDRSLAFLPWAHSYGQTCELWCAVSHGGSMGICRGVPQILEDLALVQPTVLFAVPTLYKKVYDGVQNLIGTSSPTKQKLMRAALDMG---RKYKETGGNLGFVDGIKHKVLDSVVTSKIRGRFGGNLRHGFVAGAACPKEIIDFMDDIGIPICEGYGLTETSPIIAISAPYPGSRKLGSVGKSVGGVNVVIEDPDTHQPLGPGKEGEICCYGRNVMKGYYRNPEATAEVISVAPDGKSRLFHTGDLGTMDQDGFVSVTGRLKEQYKLENGKYVVPTPIEESISMSRFISQVVVCGANRPHNVALLVPDWIAIRA----ALKIGDDVSEDDLVNDKEVRGLIDEEIMLNTYKLKKYEVPKAWSFVAP-FTAANNMLTPKMSIRRKIVIKHYEDIVSHMY 577          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: A0A6N2D9N4_9DELT (Long-chain fatty acid--CoA ligase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A6N2D9N4_9DELT)

HSP 1 Score: 520 bits (1339), Expect = 2.160e-172
Identity = 282/593 (47.55%), Postives = 384/593 (64.76%), Query Frame = 2
Query:  428 RPLFGEKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFDEPASDTHSFASFME-GTSETAPAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSIC--RDGQLCGPDEE-GEVCVSGPNVMQGYNNNPDATAEVMFELDGERYFRTGDLGTMVEGKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEK--TDLGPNATKEELANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLYGE 2188
            RPLFG KR  +G + WT+Y +FG +V + R +L   GV +GD V+ I+ NR EWAV AYATY LG  +VPMYE Q  KDW+YILEDA+AKVL VST+AI  D   F   L  ++ V C +   S+ +S+A+ +E GT+  A  +LP + + A LIYTSGTTG+PKGV LSH N +SNI  + +I P   IS  D SLSFLPWAH +GQT ELH +M+ GAS+G+AE V  L DN  E +PT+L++VP +F ++YDG+  ++   S  ++FLF + L++A ++R  L       A L +++   +  V SKVRDRFGG LK +F GGAA   EV  F ++IGI + EGYGL+ETSP+ +  + E   R++GT G+ + GV + I    D Q   PD E GE+ + GPNVMQ Y N P+AT E +++LDG+R FR+GD+G      ++RITGR KEQYKLENGKYVVP P+E  L  S +I Q  L+GDN+P+NVAL+VPD+E L  WA ++  +D  P    E L  ++     I  E++   +  K YE P+RW L+ E F+ +  MLTP + VKR  V+K Y   +  LY E
Sbjct:   23 RPLFGTKR--DGTYGWTTYAEFGAMVAQIRGALAHHGVGKGDRVSVIANNRVEWAVAAYATYGLGAQYVPMYEAQLAKDWKYILEDASAKVLIVSTEAILDDVKDFPDELEALERVICIEADPSEENSWANQLEIGTAHPADPYLPSEEEWAGLIYTSGTTGQPKGVVLSHGNFVSNINAVHEIFP---ISPDDVSLSFLPWAHSFGQTCELHCMMSAGASMGLAESVQTLIDNFGEVRPTLLFSVPRIFNRIYDGLQKRMEDESGLKRFLFYKGLEVARKKR-ELRDQGQESAWLNIQYGFFNDKVFSKVRDRFGGRLKYAFSGGAALSREVAEFIDDIGIQVYEGYGLSETSPIASANSPEA--RRIGTIGKPIPGVEIVIVDPEDPQKVLPDGEVGEIVIIGPNVMQEYLNKPEATEEAIYDLDGKRAFRSGDMGQKDTDGFIRITGRFKEQYKLENGKYVVPSPLEELLKLSGFINQVFLHGDNKPYNVALVVPDFEALAKWAQKQGISDTSP----EGLVKNDRCHARIGEELRKYSDGFKGYERPQRWTLIIEEFSTDNDMLTPSMKVKRRNVLKAYSDLLESLYDE 603          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: A0A0G3A2D5_9DELT (Long-chain acyl-CoA synthetase n=3 Tax=Archangium TaxID=47 RepID=A0A0G3A2D5_9DELT)

HSP 1 Score: 514 bits (1324), Expect = 3.960e-170
Identity = 279/592 (47.13%), Postives = 378/592 (63.85%), Query Frame = 2
Query:  425 PRPLFGEKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFDEPASDTHSFASFMEGTSET-APAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRDGQLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFELDGERYFRTGDLGTMVEGKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKTDLGPNATKEELANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLYGEARQ 2197
            PRPLFGEK  K G W+W +Y  FG +VD  R  L ++GVT+GD VA IS NR EWAV AYA Y+LG  +VPMYE Q  K+W YIL D  AKV+F +T AI          L  ++H+  F   A++  +FA  M   ++T +P   P  +DLA LIYTSGTTG PKGV LSH+N+  N+  + ++ P   +S  DRSL+FLPWAH +GQ  EL+AL++ GAS+GIAEGVDK+ DNL E QPT+L++VP +F ++YDG+  ++++    ++ +F R +++A +R+   E +Q    +L  +H   D++V SKVR RFGG LK +F G AA   EV  F +N+GI + EGYGLTETSP+ T       HRK+G+ GR + G  V I  D    G  ++GE+ V G NVM GY N PD  ++V F  DG   F+TGD+G + +  Y+ ITGRIKEQYKLENGKYVVP PIE AL  S +IT  +L+G N+PFNVA+IVPD + L+ WA+EK  L  ++  E L   EV     E   +   ++ K YE P+R+ L+ E FT    MLTP L +KR  V+K++   +  LY EA +
Sbjct:   22 PRPLFGEK--KNGQWNWMTYIQFGQMVDDLRGGLAQLGVTQGDRVAVISNNRHEWAVGAYACYTLGAAYVPMYEAQLDKEWAYILNDCGAKVVFAATDAIAAKLKAIKPELPKLEHIIRFTGTATEADTFACLMRRGADTPSPVTTPKPSDLAGLIYTSGTTGNPKGVMLSHSNLARNVCAMHEVFP---MSKEDRSLAFLPWAHSFGQNVELNALISMGASMGIAEGVDKIVDNLSEVQPTLLFSVPRIFNRIYDGLQKRMAAEKPIKRMMFNRGIEVAKQRKALAEKNQS-SLLLDAQHAFFDRVVFSKVRARFGGRLKYAFSGAAAISREVAEFIDNLGITVYEGYGLTETSPIATANYP--GHRKIGSVGRPIPGTRVEI--DRSETGDPKQGEIVVYGHNVMMGYYNLPDENSKV-FTADGG--FKTGDMGMLDDNGYVWITGRIKEQYKLENGKYVVPVPIEQALQLSPFITNVMLHGQNKPFNVAIIVPDMDSLKKWAAEK-GLDTSSIPELLKRPEVQQLYREQINEFCKDAAKGYEKPQRFLLISEDFTTANDMLTPSLKLKRRNVLKKFGEAVEELYREAEK 599          
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Match: UPI00194DED16 (long-chain fatty acid--CoA ligase n=1 Tax=Archangium violaceum TaxID=83451 RepID=UPI00194DED16)

HSP 1 Score: 514 bits (1324), Expect = 3.960e-170
Identity = 284/599 (47.41%), Postives = 378/599 (63.11%), Query Frame = 2
Query:  425 PRPLFGEKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVACISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVSTKAIHHDTHHFAGVLGNIQHVYCFDEPASDTHSFASFMEGTSET-APAFLPCKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRSLSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAVPTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVLAMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICEGYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRDGQLCGPDEEGEVCVSGPNVMQGYNNNPDATAEVMFELDGERYFRTGDLGTMVEGKYLRITGRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPDWELLRAWASEKTDLGPNATK-EELANSEVVCNLIEGEVQGALESTKKYEIPKRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLYGEARQ--EFLA 2209
            PR LFGEK  K G W W +Y  FG +VD  R  L ++GVT GD VA IS NR EWAV AYA Y+LG  +VPMYE+Q+ K+W YIL +  AKV+FV+T AI       +  L  ++H+  F     +T SFA  +   +ET +P   P  TDL  LIYTSGTTG PKGV LSH N+  N+  + +I P   ++  DRSLSFLPWAH +GQ+ ELH L + GA++GIAE VDK+ DNL E +PT+L++VP +F ++YDG+  +++S S  ++ LF R L++A +RR  L   +    ++ ++H   DK+V SKVR RFGG LK +F GGAA   EV  F +N+GI + EGYGLTETSP+ T       +RK+G+ G+ + G  V I  D    G  ++GE+ V G NVM GY N PD  A+      G+  +RTGD+G + +  YL ITGRIKEQYKLENGKYVVP PIE AL  S +I   +++G N+PFNVA+IVPD E L+ WA+EK   G +AT   EL   E V  L   ++    +S K YE P+R+ L+ E FT    MLT  L +KR  V+K+Y+  +  LY EA +  EF A
Sbjct:   22 PRQLFGEK--KNGQWTWMTYVQFGQMVDDLRGGLSQLGVTHGDRVAVISNNRHEWAVGAYACYTLGAAYVPMYEQQQEKEWLYILNNCGAKVVFVATDAIAAKLKSLSSELPKLEHIIRFTGTPHETDSFACLLRRGAETPSPLVQPKPTDLCGLIYTSGTTGNPKGVMLSHANVARNVAAMHEIFP---MAEDDRSLSFLPWAHVFGQSVELHGLFSMGAAMGIAEAVDKIIDNLSEVKPTLLFSVPRIFNRIYDGLQKRMASESPIKRMLFTRGLEVARQRR-ELTDRKDNSLLVDLQHTFFDKVVFSKVRARFGGRLKYAFSGGAAISREVAEFIDNLGITVYEGYGLTETSPIATANFP--GNRKIGSVGKAIPGTRVEI--DRTETGDPKQGEIVVHGHNVMVGYYNMPDENAKA---FTGDGGYRTGDMGYVDDDGYLWITGRIKEQYKLENGKYVVPVPIEQALQLSTFIANVMVHGQNKPFNVAIIVPDMESLKKWAAEK---GLDATSIPELLKREEVQQLYREQILEHTKSIKGYEKPQRFLLISEDFTTANDMLTASLKLKRRSVLKKYDEAVEELYREAEKSGEFRA 604          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_999.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZGH2_9STRA6.490e-27860.34Long chain acyl-CoA synthetase n=1 Tax=Tribonema m... [more]
A0A6H5JW39_9PHAE6.920e-27854.53AMP-binding domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2XXE0_9STRA2.040e-22054.10Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6U4FS11_9STRA3.790e-20350.49Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
I2CP10_NANGC3.510e-17447.75Long-chain acyl-CoA ligase n=1 Tax=Nannochloropsis... [more]
D0LX32_HALO13.830e-17346.37AMP-dependent synthetase and ligase n=1 Tax=Halian... [more]
B8BZX2_THAPS1.760e-17246.76AMP-binding domain-containing protein (Fragment) n... [more]
A0A6N2D9N4_9DELT2.160e-17247.55Long-chain fatty acid--CoA ligase n=1 Tax=Deltapro... [more]
A0A0G3A2D5_9DELT3.960e-17047.13Long-chain acyl-CoA synthetase n=3 Tax=Archangium ... [more]
UPI00194DED163.960e-17047.41long-chain fatty acid--CoA ligase n=1 Tax=Archangi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_999contigC-australica_Contig_999:12878..16822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog502025.Hoch_3572
PFAMsAMP-binding
Model size2501
Max annot lvl28221|Deltaproteobacteria
KEGG rclassRC00004,RC00014
KEGG koko:K01897
KEGG TC4.C.1.1
KEGG ReactionR01280
KEGG Pathwayko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920
KEGG ModuleM00086
Hectar predicted targeting categorymitochondrion
Exons12
Evalue1.53e-175
EggNOG OGsCOG1022@1|root,COG1022@2|Bacteria,1MU4D@1224|Proteobacteria,42Z0F@68525|delta/epsilon subdivisions,2WTWA@28221|Deltaproteobacteria,2YUMY@29|Myxococcales
Ec32 ortholog descriptionlong chain acyl-coA synthetase
Ec32 orthologEc-12_008720.1
EC6.2.1.3
DescriptionAMP-binding enzyme
Cds size2115
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588866.9910016-UTR-C-australica_Contig_999:12877..131511682588866.9910016-UTR-C-australica_Contig_999:12877..13151Chrysoparadoxa australica CS_1217UTRC-australica_Contig_999 12878..13151 -
1682588867.1375709-UTR-C-australica_Contig_999:16710..168221682588867.1375709-UTR-C-australica_Contig_999:16710..16822Chrysoparadoxa australica CS_1217UTRC-australica_Contig_999 16711..16822 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588867.0071685-CDS-C-australica_Contig_999:13151..132921682588867.0071685-CDS-C-australica_Contig_999:13151..13292Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 13152..13292 -
1682588867.0177574-CDS-C-australica_Contig_999:13405..134711682588867.0177574-CDS-C-australica_Contig_999:13405..13471Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 13406..13471 -
1682588867.027938-CDS-C-australica_Contig_999:13631..137931682588867.027938-CDS-C-australica_Contig_999:13631..13793Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 13632..13793 -
1682588867.038185-CDS-C-australica_Contig_999:13943..140881682588867.038185-CDS-C-australica_Contig_999:13943..14088Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 13944..14088 -
1682588867.0489235-CDS-C-australica_Contig_999:14320..144271682588867.0489235-CDS-C-australica_Contig_999:14320..14427Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 14321..14427 -
1682588867.061741-CDS-C-australica_Contig_999:14531..147171682588867.061741-CDS-C-australica_Contig_999:14531..14717Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 14532..14717 -
1682588867.0715783-CDS-C-australica_Contig_999:14836..149171682588867.0715783-CDS-C-australica_Contig_999:14836..14917Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 14837..14917 -
1682588867.0818992-CDS-C-australica_Contig_999:15069..152041682588867.0818992-CDS-C-australica_Contig_999:15069..15204Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 15070..15204 -
1682588867.099522-CDS-C-australica_Contig_999:15300..154671682588867.099522-CDS-C-australica_Contig_999:15300..15467Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 15301..15467 -
1682588867.1100492-CDS-C-australica_Contig_999:15634..159741682588867.1100492-CDS-C-australica_Contig_999:15634..15974Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 15635..15974 -
1682588867.1186223-CDS-C-australica_Contig_999:16052..162391682588867.1186223-CDS-C-australica_Contig_999:16052..16239Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 16053..16239 -
1682588867.1277223-CDS-C-australica_Contig_999:16312..167101682588867.1277223-CDS-C-australica_Contig_999:16312..16710Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 16313..16710 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_999.9.2prot_C-australica_Contig_999.9.2Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_999 13152..16710 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_999.9.2

>prot_C-australica_Contig_999.9.2 ID=prot_C-australica_Contig_999.9.2|Name=mRNA_C-australica_Contig_999.9.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=705bp
MLALRSLTRRQAIVGARCAASQAHRATGKACAPGLLLLQPQGGHKLAFST
GTQAAPIHETPHYMNYETLVDMHLITKEAFMDRQVQYNFHLAPQPPVTSR
APPLPRPLFGEKRQKEGDWHWTSYKDFGHLVDRCRTSLQEIGVTRGDTVA
CISKNRSEWAVCAYATYSLGGVFVPMYEEQRPKDWRYILEDANAKVLFVS
TKAIHHDTHHFAGVLGNIQHVYCFDEPASDTHSFASFMEGTSETAPAFLP
CKTDLATLIYTSGTTGKPKGVQLSHNNIISNITGLRDILPEDLISCHDRS
LSFLPWAHCYGQTAELHALMAHGASLGIAEGVDKLGDNLMETQPTVLYAV
PTLFKKVYDGIHAKVSSASAAQQFLFKRSLQIAHRRRMHLESDQPVGAVL
AMEHKLLDKLVLSKVRDRFGGNLKVSFVGGAASPLEVLSFFENIGIPICE
GYGLTETSPLVTVQTTELAHRKLGTTGRQLGGVTVSICRDGQLCGPDEEG
EVCVSGPNVMQGYNNNPDATAEVMFELDGERYFRTGDLGTMVEGKYLRIT
GRIKEQYKLENGKYVVPGPIEAALSSSKYITQALLYGDNRPFNVALIVPD
WELLRAWASEKTDLGPNATKEELANSEVVCNLIEGEVQGALESTKKYEIP
KRWHLLEEGFTAERGMLTPKLSVKRHIVVKEYEGTIRHLYGEARQEFLAR
EAAA*
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mRNA from alignment at C-australica_Contig_999:12878..16822-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_999.9.2 ID=mRNA_C-australica_Contig_999.9.2|Name=mRNA_C-australica_Contig_999.9.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3945bp|location=Sequence derived from alignment at C-australica_Contig_999:12878..16822- (Chrysoparadoxa australica CS_1217)
CTGGTTCTCACTGGTTACACTGTCCACTGCCCCCCAGAGGCTACTGAGAG GATATACGGCAGGAAAAGGAGGAACCCACTTCTCACGAAGCTCAAAACCA CTCCGAAGAGCAATGCTAGCTTTACGATCCTTAACGCGCCGCCAAGCGAT AGTGGGGGCTAGATGTGCGGCTTCTCAAGCTCATAGGGCTACGGGTAAAG CTTGTGCCCCTGGGCTGCTGCTGTTGCAGCCCCAGGGAGGACACAAGCTG GCGTTCTCCACGGGAACCCAAGCTGCCCCTATTCACGAGACGCCCCACTA TATGAACTACGAAACGCTGGTCGACATGCATCTCATAACGAAAGAAGCGT TCATGGATAGGCAAGTTCAATACAACTTCCACCTAGCACCTCAACCGCCA GTAACCAGCCGTGCTCCCCCTCTCCCCAGGCCTCTGTTTGGGGAGAAGCG CCAGAAGGAGGGTGACTGGCACTGGACATCGTACAAAGATTTTGGCCATC TTGTAGACAGGTGAGGAGCACAGTTGTTCTTACTGTTCCCCTCTCCACAA CCCTTACAGTTTGCCTGCACCGACATCAACCAGGTGCAGAACAAGCCTTC AGGAGATAGGAGTGACTAGAGGCGACACTGTAGCATGCATCAGCAAGAAC CGGTCTGAGTGGGCAGTGTGTGCCTATGCCACCTACTCGTTGGGAGGCGT TTTTGTCCCCATGTACGAGGAGCAGCGCCCGAAAGACTGGCGGTATATCC TAGAGGATGCTAATGCCAAGGCAAGCAGTAAATAACTTCCCTTCAACCTT TAACGTCGAGGCATTGCCCTAACCATCTGCCTTCCTTCCTTGCCTCAGGT CCTCTTTGTCTCCACCAAGGCCATCCACCACGACACGCATCACTTTGCAG GCGTGCTTGGCAACATCCAGCATGTCTACTGCTTTGACGAGCCCGCCTCA GACACCCACTCCTTTGCCTCCTTCATGGAGGGCACCAGTGAGACTGCACC AGCCTTCCTGCCATGCAAGACCGATCTTGCCACTCTCATCTACACATCCG GAACTACTGGGAAGCCCAAGGGCGTGCAGCTGAGCCACAACAACATCATC TCCAACATCACAGGGCTGCGTGACATTCTGCCGGAGGATCTCATCTCCTG CCATGACCGATCTCTCAGCTTCCTACCATGGGCGCACTGTAAGTGAGCAA TCAATCACCTGAGCTAATCTGATATGATTTGACCTGGCTTAATTTGATCT TTGCTGTTTGCTTATGGCACGCTAACCTGAATAGAATAGAATAGAATTGG AGGAAGCTTCTAGGAAGAGCTGCTAGTGACTCTTATAACTTGTGTCTTCT AACAGGTTACGGGCAGACAGCTGAGTTACACGCCTTGATGGCCCACGGCG CATCCCTGGGCATTGCTGAAGGGGTGGACAAGCTGGGTGATAACCTTATG GAGACACAGCCCACTGTGCTGTATGCGGTGCCAACGCTGTTCAAGAAGGT GTATGATGGCATCCACGCCAAGGTAATAAGATGAAGAAAAAGAAGGAGCT AAGTAATGAAGGCTGTGTACACTCCTCTCCCACTGACATGACATGGCCTT CCGTATCTCTCCTCTCAGGTATCTAGCGCCAGTGCAGCACAGCAGTTCCT ATTCAAGAGAAGCCTGCAGATTGCCCACAGGAGGCGTATGCACCTTGAGA GCGATCAGCCTGTTGGGGCAGTGTTGGCTATGGAGCACAAGCTGCTAGAC AAGGTTGTTGAGTTGCATCTGCATCAATTCATTGAGAGACCAATGCTGTG CTACTCCACTTGCAGCAGCTGACGCTGACGTACTACGCGAGAGAGTGCCC TCCAGTCAGTCACTCATTTTCCTCCGCTTGCTCCCACTCATCTTTCCCCA AACAGCTGGTCCTCTCTAAGGTAAGGGACAGGTTTGGTGGCAACCTCAAG GTTAGCTTCGTTGGAGGCGCAGCGTCACCTCTAGAGGTAGGTCAAGCTGA TCAGTACTTGGAGGCTAACGTAATGATGGGAAATGCAGTGGACTGCCTCC CAGCAACCTGTCAAGCTTTCCTCCTTCCCTCATGAACTTCCTCTCCCCTT TGTAGGTGCTGTCCTTCTTTGAGAACATTGGCATCCCCATCTGCGAAGGC TACGGCCTAACAGAGACTTCACCACTAGTGACGGTCCAAACCACTGAGTT GGCACATAGGAAGCTTGGCACCACAGGCCGTCAGCTTGGAGGAGTTACAG TGTCTATCTGCAGGGACGGGCAGCTCTGTGGCCCTGATGAGGTGGGTGGG TTTAAAGGAAAGATGGGCACCTTGTGGAGCACCTGAAGCTTTGCCTTCTC TGAGGGGTAGGCCAACTTATTGATGCTCCTTTCTCTTGCCATTAGGAGGG TGAGGTGTGCGTGTCTGGCCCCAATGTCATGCAGGGTTACAATAACAACC CTGATGCAACTGCTGAAGTCATGTTTGAACTCGATGGGGAGAGGTACTTC AGGTGAGCTATCGATCTCTGTCAAAGGAGTAACATGTAGAGGGAATCATT GTGTGCGTGTTTGGAAAGTGAGATTGAGGGTAGCAATATTGTGTCAGTGA TAGCCACGCCAGAACTGAAGCACATGCAAATCCAAAGCCGGAGTCAAGCC TAAGCCTCTGCGAAGCAGTAACTTCTCGCCTCAATTGGCCTCATTTGATC TCATTTGACCTCAATTGGATTGCTTGGCCTGCAGGACTGGTGATCTTGGC ACCATGGTTGAGGGGAAGTATCTCCGAATAACTGGCCGCATCAAGGAGCA ATACAAGCTAGAAAATGGCAAGTACGTAGTACCTGGACCCATTGAGGCGG CGCTTTCTAGCAGCAAGTATATTACCCAGGTATGTGTACTCTGCGTGGTT GGGTGAGAGGTTGGGGTCAATAGAAGAGAAGAGAAGCGTTTACTATATGC AGCATCACTGACCTCTTACCTTTTCGCTCTCATCCCAAACCTGATTGTGC ATTGCTTGCCTCTTTTCTCATTGCCACAGGCCCTCTTATACGGTGACAAC CGGCCATTCAACGTGGCTTTGATTGTACCTGACTGGGAGCTGCTCAGGGC CTGGGCCAGCGAGAAGACTGACCTAGGCCCCAATGCCACTAAGGAAGAGT TGGCCAACAGTGAAGTTGTCTGCAATCTGATAGAAGGAGAGGTGAGAACG AAACGGGAGGAAAGCTTGGCTGCTGCTACAGCTCAAGCGACAGTGCATTC AGCTGACCTCATGACTCTTAACTATCTTAGCTCTCTTACCTACCTTAACT AGAGGCCATGGTCTAACCCACCCTCCATTTGCCTTTGAATGTTGTACTCA GGTGCAGGGAGCCCTGGAGTCCACTAAGAAGTACGAGATTCCCAAGCGGT GGCATCTTCTTGAGGAGGTCAGCTTGTAAACTCTTTTTGCGCATTTCTGC TTGTTAATCATCCCCTCTCTTTTTTCCCCCCCCTCCCCTTATATCCTCTC ACGAATCGCTTTGGTCTTACCACCATGCAGGGCTTCACAGCAGAGCGAGG CATGCTGACTCCCAAGCTCAGCGTTAAGAGGCACATAGTTGTAAAGGAGT ATGAGGGAACCATCAGGCACTTGTACGGTGAAGCCAGGCAGGAGTTCCTT GCACGTGAGGCTGCAGCCTGATGACCTTGATGACGTGTTGCTTACAGTGC AAGAGCTCCATGGTGGGGAGGTGGACTTGGGGGACGGTGAAGGGAGATCT ATATTATATATTGTATACATAGACTAGAGGACGGTGTCAAGACCTGCAGT GAATGAATACTTTTTGCGATAGGCTGTTTATAGAGGTTAGGTTAGGTTAG AGACAGAGCTAGTGGGGCAGCAGGCCCAATGTTTTGTATAACTGACTCAC TCAAGAGAGAGAAAGAGTCTATTTGAATGCATTTCAAATTGCCAT
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Coding sequence (CDS) from alignment at C-australica_Contig_999:12878..16822-

>mRNA_C-australica_Contig_999.9.2 ID=mRNA_C-australica_Contig_999.9.2|Name=mRNA_C-australica_Contig_999.9.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=2115bp|location=Sequence derived from alignment at C-australica_Contig_999:12878..16822- (Chrysoparadoxa australica CS_1217)
ATGCTAGCTTTACGATCCTTAACGCGCCGCCAAGCGATAGTGGGGGCTAG
ATGTGCGGCTTCTCAAGCTCATAGGGCTACGGGTAAAGCTTGTGCCCCTG
GGCTGCTGCTGTTGCAGCCCCAGGGAGGACACAAGCTGGCGTTCTCCACG
GGAACCCAAGCTGCCCCTATTCACGAGACGCCCCACTATATGAACTACGA
AACGCTGGTCGACATGCATCTCATAACGAAAGAAGCGTTCATGGATAGGC
AAGTTCAATACAACTTCCACCTAGCACCTCAACCGCCAGTAACCAGCCGT
GCTCCCCCTCTCCCCAGGCCTCTGTTTGGGGAGAAGCGCCAGAAGGAGGG
TGACTGGCACTGGACATCGTACAAAGATTTTGGCCATCTTGTAGACAGGT
GCAGAACAAGCCTTCAGGAGATAGGAGTGACTAGAGGCGACACTGTAGCA
TGCATCAGCAAGAACCGGTCTGAGTGGGCAGTGTGTGCCTATGCCACCTA
CTCGTTGGGAGGCGTTTTTGTCCCCATGTACGAGGAGCAGCGCCCGAAAG
ACTGGCGGTATATCCTAGAGGATGCTAATGCCAAGGTCCTCTTTGTCTCC
ACCAAGGCCATCCACCACGACACGCATCACTTTGCAGGCGTGCTTGGCAA
CATCCAGCATGTCTACTGCTTTGACGAGCCCGCCTCAGACACCCACTCCT
TTGCCTCCTTCATGGAGGGCACCAGTGAGACTGCACCAGCCTTCCTGCCA
TGCAAGACCGATCTTGCCACTCTCATCTACACATCCGGAACTACTGGGAA
GCCCAAGGGCGTGCAGCTGAGCCACAACAACATCATCTCCAACATCACAG
GGCTGCGTGACATTCTGCCGGAGGATCTCATCTCCTGCCATGACCGATCT
CTCAGCTTCCTACCATGGGCGCACTGTTACGGGCAGACAGCTGAGTTACA
CGCCTTGATGGCCCACGGCGCATCCCTGGGCATTGCTGAAGGGGTGGACA
AGCTGGGTGATAACCTTATGGAGACACAGCCCACTGTGCTGTATGCGGTG
CCAACGCTGTTCAAGAAGGTGTATGATGGCATCCACGCCAAGGTATCTAG
CGCCAGTGCAGCACAGCAGTTCCTATTCAAGAGAAGCCTGCAGATTGCCC
ACAGGAGGCGTATGCACCTTGAGAGCGATCAGCCTGTTGGGGCAGTGTTG
GCTATGGAGCACAAGCTGCTAGACAAGCTGGTCCTCTCTAAGGTAAGGGA
CAGGTTTGGTGGCAACCTCAAGGTTAGCTTCGTTGGAGGCGCAGCGTCAC
CTCTAGAGGTGCTGTCCTTCTTTGAGAACATTGGCATCCCCATCTGCGAA
GGCTACGGCCTAACAGAGACTTCACCACTAGTGACGGTCCAAACCACTGA
GTTGGCACATAGGAAGCTTGGCACCACAGGCCGTCAGCTTGGAGGAGTTA
CAGTGTCTATCTGCAGGGACGGGCAGCTCTGTGGCCCTGATGAGGAGGGT
GAGGTGTGCGTGTCTGGCCCCAATGTCATGCAGGGTTACAATAACAACCC
TGATGCAACTGCTGAAGTCATGTTTGAACTCGATGGGGAGAGGTACTTCA
GGACTGGTGATCTTGGCACCATGGTTGAGGGGAAGTATCTCCGAATAACT
GGCCGCATCAAGGAGCAATACAAGCTAGAAAATGGCAAGTACGTAGTACC
TGGACCCATTGAGGCGGCGCTTTCTAGCAGCAAGTATATTACCCAGGCCC
TCTTATACGGTGACAACCGGCCATTCAACGTGGCTTTGATTGTACCTGAC
TGGGAGCTGCTCAGGGCCTGGGCCAGCGAGAAGACTGACCTAGGCCCCAA
TGCCACTAAGGAAGAGTTGGCCAACAGTGAAGTTGTCTGCAATCTGATAG
AAGGAGAGGTGCAGGGAGCCCTGGAGTCCACTAAGAAGTACGAGATTCCC
AAGCGGTGGCATCTTCTTGAGGAGGGCTTCACAGCAGAGCGAGGCATGCT
GACTCCCAAGCTCAGCGTTAAGAGGCACATAGTTGTAAAGGAGTATGAGG
GAACCATCAGGCACTTGTACGGTGAAGCCAGGCAGGAGTTCCTTGCACGT
GAGGCTGCAGCCTGA
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