Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 536 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 438 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588865.5093296-UTR-C-australica_Contig_998:11193..11291 | 1682588865.5093296-UTR-C-australica_Contig_998:11193..11291 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_998 11194..11291 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588865.5207345-CDS-C-australica_Contig_998:11291..11331 | 1682588865.5207345-CDS-C-australica_Contig_998:11291..11331 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 11292..11331 + |
| 1682588865.5305119-CDS-C-australica_Contig_998:11403..11507 | 1682588865.5305119-CDS-C-australica_Contig_998:11403..11507 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 11404..11507 + |
| 1682588865.5406063-CDS-C-australica_Contig_998:11572..11698 | 1682588865.5406063-CDS-C-australica_Contig_998:11572..11698 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 11573..11698 + |
| 1682588865.5504217-CDS-C-australica_Contig_998:11769..11937 | 1682588865.5504217-CDS-C-australica_Contig_998:11769..11937 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_998 11770..11937 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_998.5.1 >prot_C-australica_Contig_998.5.1 ID=prot_C-australica_Contig_998.5.1|Name=mRNA_C-australica_Contig_998.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=146bp
MDLDVGDWWKGGEGWVEDPFAREPTPRLQRYLKRREKPLTLDPGKKRVVG
CWKSTQCEITGKINSMPAPHVPQVKQWSEKYYSADAYWGTVLTPQLPFSD
GGREGGGGPVQEPYSNWPVSSEEEWRLKERENPVIVAASELPLNL* back to topmRNA from alignment at C-australica_Contig_998:11194..11937+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_998.5.1 ID=mRNA_C-australica_Contig_998.5.1|Name=mRNA_C-australica_Contig_998.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=744bp|location=Sequence derived from alignment at C-australica_Contig_998:11194..11937+ (Chrysoparadoxa australica CS_1217)
TGGCTCTCCAGTTCTTCCCCACTCGTAGAGAGGAGCGCCTTCGCGAAAGA
AGGCTTTTTCTTTGCTTGCACCACCTCTTCTGAGCCTTCGCTCGAGAGAT
GGACCTTGATGTAGGGGACTGGTGGAAGGGAGGAGAAGGTCCTGAAAGAG
CTTGATGCTGCGATTATATCTCTTCTTGTCCTTCCAGCCTAATCACCCCT
TGTCTCTCAGGCTGGGTTGAGGACCCTTTTGCACGGGAGCCTACGCCCCG
TTTGCAGCGATACTTGAAGAGAAGGGAAAAGCCTCTGACCCTTGACCCTG
GAAAGAAAAGAGTGGTACGTTGCCTCCTTCTCCCGAATTCATCAAGCTAC
AGCTTTGAAGTCACAGCACCAATCCCCAGGTAGGGTGCTGGAAAAGCACA
CAGTGTGAGATCACTGGCAAAATCAACAGCATGCCAGCACCTCATGTACC
TCAAGTTAAACAATGGAGCGAGAAGTATTATAGCGCAGATGCATACTGGG
GGACGGTGAGTTAGGGAAGTGCTTGAGGCCCTAAAGTGAGCTCCCCTCCA
TCTCACCATGACCCCTGCTGTCACAGGTCCTCACACCACAGCTTCCTTTT
TCCGATGGAGGAAGAGAAGGGGGGGGTGGGCCAGTGCAGGAGCCATACTC
GAACTGGCCTGTTTCTAGTGAAGAGGAGTGGAGACTGAAAGAGCGAGAGA
ATCCAGTAATAGTTGCAGCAAGTGAGTTGCCGCTTAACTTATGA back to topCoding sequence (CDS) from alignment at C-australica_Contig_998:11194..11937+ >mRNA_C-australica_Contig_998.5.1 ID=mRNA_C-australica_Contig_998.5.1|Name=mRNA_C-australica_Contig_998.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=438bp|location=Sequence derived from alignment at C-australica_Contig_998:11194..11937+ (Chrysoparadoxa australica CS_1217)
ATGGACCTTGATGTAGGGGACTGGTGGAAGGGAGGAGAAGGCTGGGTTGA
GGACCCTTTTGCACGGGAGCCTACGCCCCGTTTGCAGCGATACTTGAAGA
GAAGGGAAAAGCCTCTGACCCTTGACCCTGGAAAGAAAAGAGTGGTAGGG
TGCTGGAAAAGCACACAGTGTGAGATCACTGGCAAAATCAACAGCATGCC
AGCACCTCATGTACCTCAAGTTAAACAATGGAGCGAGAAGTATTATAGCG
CAGATGCATACTGGGGGACGGTCCTCACACCACAGCTTCCTTTTTCCGAT
GGAGGAAGAGAAGGGGGGGGTGGGCCAGTGCAGGAGCCATACTCGAACTG
GCCTGTTTCTAGTGAAGAGGAGTGGAGACTGAAAGAGCGAGAGAATCCAG
TAATAGTTGCAGCAAGTGAGTTGCCGCTTAACTTATGA back to top
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